RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-225ENST00000617087 MAP3K7O43318 606 aa10.75□□□□□ -0.69
PVT1-225ENST00000617087 TYW1BQ6NUM6 668 aa10.74□□□□□ -0.69
PVT1-225ENST00000617087 RSPH6AQ9H0K4 717 aa10.74□□□□□ -0.69
PVT1-225ENST00000617087 PCDHGA4Q9Y5G9 962 aa10.74□□□□□ -0.69
PVT1-225ENST00000617087 KDM4FA0A1W2PPD8 638 aa10.73□□□□□ -0.69
PVT1-225ENST00000617087 RBM33Q96EV2 1170 aaKnown RBP10.73□□□□□ -0.69
PVT1-225ENST00000617087 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.73□□□□□ -0.69
PVT1-225ENST00000617087 TSR1Q2NL82 804 aaKnown RBP10.72□□□□□ -0.69
PVT1-225ENST00000617087 FBXW7Q969H0 707 aa10.71□□□□□ -0.69
PVT1-225ENST00000617087 PHOX2BQ99453 314 aa10.71□□□□□ -0.69
PVT1-225ENST00000617087 CLCN1P35523 988 aa10.7□□□□□ -0.7
PVT1-225ENST00000617087 JPH4Q96JJ6 628 aa10.7□□□□□ -0.7
PVT1-225ENST00000617087 FLIIQ13045 1269 aa10.69□□□□□ -0.7
PVT1-225ENST00000617087 GPCPD1Q9NPB8 672 aa10.69□□□□□ -0.7
PVT1-225ENST00000617087 ONECUT3O60422 494 aaPredicted RBP10.67□□□□□ -0.7
PVT1-225ENST00000617087 FOSBP53539 338 aa10.67□□□□□ -0.7
PVT1-225ENST00000617087 MDM2Q00987 491 aaPredicted RBP10.67□□□□□ -0.7
PVT1-225ENST00000617087 PCMTD1Q96MG8 357 aaPredicted RBP10.67□□□□□ -0.7
PVT1-225ENST00000617087 SH3D19Q5HYK7 790 aa10.66□□□□□ -0.7
PVT1-225ENST00000617087 CERKQ8TCT0 537 aa10.66□□□□□ -0.7
PVT1-225ENST00000617087 SSTR3P32745 418 aaPredicted RBP10.65□□□□□ -0.7
PVT1-225ENST00000617087 OATP04181 439 aa10.64□□□□□ -0.71
PVT1-225ENST00000617087 C6orf132Q5T0Z8 1188 aa10.64□□□□□ -0.71
PVT1-225ENST00000617087 METTL3Q86U44 580 aaKnown RBP10.64□□□□□ -0.71
PVT1-225ENST00000617087 PADI6Q6TGC4 694 aa10.62□□□□□ -0.71
PVT1-225ENST00000617087 TTC13Q8NBP0 860 aa10.62□□□□□ -0.71
PVT1-225ENST00000617087 FAM217BQ9NTX9 383 aaPredicted RBP10.62□□□□□ -0.71
PVT1-225ENST00000617087 SKIV2LQ15477 1246 aaKnown RBP10.61□□□□□ -0.71
PVT1-225ENST00000617087 FAM161AQ3B820 660 aa10.61□□□□□ -0.71
PVT1-225ENST00000617087 PXYLP1Q8TE99 480 aa10.61□□□□□ -0.71
PVT1-225ENST00000617087 ZDHHC16Q969W1 377 aa10.61□□□□□ -0.71
PVT1-225ENST00000617087 RBM27Q9P2N5 1060 aaKnown RBP10.61□□□□□ -0.71
PVT1-225ENST00000617087 ADGRG1Q9Y653 693 aa10.61□□□□□ -0.71
PVT1-225ENST00000617087 BEGAINQ9BUH8 593 aa10.6□□□□□ -0.71
PVT1-225ENST00000617087 POTEHQ6S545 545 aa10.59□□□□□ -0.71
PVT1-225ENST00000617087 ZNF454Q8N9F8 522 aa10.59□□□□□ -0.71
PVT1-225ENST00000617087 ADAM33Q9BZ11 813 aa10.57□□□□□ -0.72
PVT1-225ENST00000617087 NUDT7P0C024 238 aa10.56□□□□□ -0.72
PVT1-225ENST00000617087 NLRP7Q8WX94 980 aa10.56□□□□□ -0.72
PVT1-225ENST00000617087 C1orf115Q9H7X2 142 aa10.56□□□□□ -0.72
PVT1-225ENST00000617087 A6NJR5 290 aa10.55□□□□□ -0.72
PVT1-225ENST00000617087 HOXB3P14651 431 aaPredicted RBP10.55□□□□□ -0.72
PVT1-225ENST00000617087 PRSS12P56730 875 aa10.55□□□□□ -0.72
PVT1-225ENST00000617087 DOK7Q18PE1 504 aa10.55□□□□□ -0.72
PVT1-225ENST00000617087 ARSIQ5FYB1 569 aa10.55□□□□□ -0.72
PVT1-225ENST00000617087 KHSRPQ92945 711 aaKnown RBP eCLIP10.55□□□□□ -0.72
PVT1-225ENST00000617087 ZSWIM6Q9HCJ5 1215 aa10.55□□□□□ -0.72
PVT1-225ENST00000617087 GPR153Q6NV75 609 aa10.54□□□□□ -0.72
PVT1-225ENST00000617087 PROCA1Q8NCQ7 364 aaPredicted RBP10.54□□□□□ -0.72
PVT1-225ENST00000617087 SP7Q8TDD2 431 aaPredicted RBP10.54□□□□□ -0.72
PVT1-225ENST00000617087 UBTFP17480 764 aaKnown RBP10.53□□□□□ -0.72
PVT1-225ENST00000617087 MCM6Q14566 821 aa10.53□□□□□ -0.72
PVT1-225ENST00000617087 POTEJP0CG39 1038 aa10.52□□□□□ -0.73
PVT1-225ENST00000617087 RBM46Q8TBY0 533 aaKnown RBP10.52□□□□□ -0.73
PVT1-225ENST00000617087 CDCA7LQ96GN5 454 aa10.52□□□□□ -0.73
PVT1-225ENST00000617087 MYSM1Q5VVJ2 828 aa10.51□□□□□ -0.73
PVT1-225ENST00000617087 CLUAP1Q96AJ1 413 aa10.51□□□□□ -0.73
PVT1-225ENST00000617087 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.51□□□□□ -0.73
PVT1-225ENST00000617087 POLR3EQ9NVU0 708 aa10.51□□□□□ -0.73
PVT1-225ENST00000617087 RIMBP2O15034 1052 aa10.5□□□□□ -0.73
PVT1-225ENST00000617087 ARID3CA6NKF2 412 aa10.49□□□□□ -0.73
PVT1-225ENST00000617087 APBB1O00213 710 aa10.49□□□□□ -0.73
PVT1-225ENST00000617087 FAM198AQ9UFP1 575 aa10.49□□□□□ -0.73
PVT1-225ENST00000617087 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.48□□□□□ -0.73
PVT1-225ENST00000617087 TRAK2O60296 914 aa10.48□□□□□ -0.73
PVT1-225ENST00000617087 DIXDC1Q155Q3 683 aa10.48□□□□□ -0.73
PVT1-225ENST00000617087 CLK2P49760 499 aaKnown RBP10.47□□□□□ -0.73
PVT1-225ENST00000617087 EYA1Q99502 592 aa10.47□□□□□ -0.73
PVT1-225ENST00000617087 TBC1D2Q9BYX2 928 aa10.47□□□□□ -0.73
PVT1-225ENST00000617087 LHX6Q9UPM6 363 aa10.47□□□□□ -0.73
PVT1-225ENST00000617087 COL9A1P20849 921 aa10.46□□□□□ -0.73
PVT1-225ENST00000617087 ARID3AQ99856 593 aa10.46□□□□□ -0.73
PVT1-225ENST00000617087 BCL2L12Q9HB09 334 aa10.46□□□□□ -0.73
PVT1-225ENST00000617087 RCCD1A6NED2 376 aa10.45□□□□□ -0.74
PVT1-225ENST00000617087 PPP4R3BQ5MIZ7 849 aa10.45□□□□□ -0.74
PVT1-225ENST00000617087 ATP1B4Q9UN42 357 aaPredicted RBP10.45□□□□□ -0.74
PVT1-225ENST00000617087 PSDA5PKW4 1024 aaPredicted RBP10.44□□□□□ -0.74
PVT1-225ENST00000617087 POTEB2H3BUK9 544 aa10.44□□□□□ -0.74
PVT1-225ENST00000617087 TSKSQ9UJT2 592 aa10.43□□□□□ -0.74
PVT1-225ENST00000617087 SPDYE5A6NIY4 337 aa10.42□□□□□ -0.74
PVT1-225ENST00000617087 PPP1R3GB7ZBB8 358 aa10.42□□□□□ -0.74
PVT1-225ENST00000617087 CD46P15529 392 aa10.42□□□□□ -0.74
PVT1-225ENST00000617087 PPP2R2DQ66LE6 453 aa10.42□□□□□ -0.74
PVT1-225ENST00000617087 ZNF710Q8N1W2 664 aa10.42□□□□□ -0.74
PVT1-225ENST00000617087 BANK1Q8NDB2 785 aa10.42□□□□□ -0.74
PVT1-225ENST00000617087 SPIRE2Q8WWL2 714 aa10.42□□□□□ -0.74
PVT1-225ENST00000617087 RFC5P40937 340 aa10.41□□□□□ -0.74
PVT1-225ENST00000617087 FBXO31Q5XUX0 539 aaPredicted RBP10.41□□□□□ -0.74
PVT1-225ENST00000617087 FNBP4Q8N3X1 1017 aaPredicted RBP10.41□□□□□ -0.74
PVT1-225ENST00000617087 LIMD1Q9UGP4 676 aa10.41□□□□□ -0.74
PVT1-225ENST00000617087 C3orf80F5H4A9 247 aa10.4□□□□□ -0.74
PVT1-225ENST00000617087 PTPREP23469 700 aa10.4□□□□□ -0.74
PVT1-225ENST00000617087 TUSC1Q2TAM9 212 aa10.4□□□□□ -0.74
PVT1-225ENST00000617087 NUDT18Q6ZVK8 323 aa10.4□□□□□ -0.74
PVT1-225ENST00000617087 PROSER2Q86WR7 435 aaPredicted RBP10.4□□□□□ -0.74
PVT1-225ENST00000617087 RIC3Q7Z5B4 369 aa10.39□□□□□ -0.75
PVT1-225ENST00000617087 POM121Q96HA1 1249 aa10.39□□□□□ -0.75
PVT1-225ENST00000617087 SPTLC1O15269 473 aa10.38□□□□□ -0.75
PVT1-225ENST00000617087 DNAJB2P25686 324 aa10.38□□□□□ -0.75
PVT1-225ENST00000617087 TMEM259Q4ZIN3 620 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms