RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 FBXO31Q5XUX0 539 aaPredicted RBP28.63■■■□□ 2.17
TRAPPC3-209ENST00000616395 TNRQ92752 1358 aa28.62■■■□□ 2.17
TRAPPC3-209ENST00000616395 CCNB3Q8WWL7 1395 aa28.62■■■□□ 2.17
TRAPPC3-209ENST00000616395 ALKQ9UM73 1620 aa28.61■■■□□ 2.17
TRAPPC3-209ENST00000616395 VWDEQ8N2E2 1590 aa28.6■■■□□ 2.17
TRAPPC3-209ENST00000616395 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.58■■■□□ 2.17
TRAPPC3-209ENST00000616395 ANKLE2Q86XL3 938 aa28.58■■■□□ 2.17
TRAPPC3-209ENST00000616395 SENP3Q9H4L4 574 aaPredicted RBP28.56■■■□□ 2.16
TRAPPC3-209ENST00000616395 ZNF644Q9H582 1327 aaPredicted RBP28.56■■■□□ 2.16
TRAPPC3-209ENST00000616395 PZPP20742 1482 aa28.54■■■□□ 2.16
TRAPPC3-209ENST00000616395 DHX29Q7Z478 1369 aaKnown RBP28.54■■■□□ 2.16
TRAPPC3-209ENST00000616395 NPHP4O75161 1426 aaPredicted RBP28.52■■■□□ 2.16
TRAPPC3-209ENST00000616395 MBD5Q9P267 1494 aa28.51■■■□□ 2.16
TRAPPC3-209ENST00000616395 THEMISQ8N1K5 641 aaPredicted RBP28.51■■■□□ 2.15
TRAPPC3-209ENST00000616395 KIF3BO15066 747 aa28.5■■■□□ 2.15
TRAPPC3-209ENST00000616395 RTEL1-TNFRSF6BF6WH68 1400 aa28.5■■■□□ 2.15
TRAPPC3-209ENST00000616395 MED14O60244 1454 aa28.5■■■□□ 2.15
TRAPPC3-209ENST00000616395 KDM5DQ9BY66 1539 aa28.5■■■□□ 2.15
TRAPPC3-209ENST00000616395 MIA2Q96PC5 1412 aa28.47■■■□□ 2.15
TRAPPC3-209ENST00000616395 DEPDC5O75140 1603 aa28.47■■■□□ 2.15
TRAPPC3-209ENST00000616395 MTUS2Q5JR59 1369 aa28.46■■■□□ 2.15
TRAPPC3-209ENST00000616395 UGGT1Q9NYU2 1555 aa28.46■■■□□ 2.15
TRAPPC3-209ENST00000616395 NLRP1Q9C000 1473 aa28.46■■■□□ 2.15
TRAPPC3-209ENST00000616395 WASHC2CQ9Y4E1 1318 aa28.45■■■□□ 2.15
TRAPPC3-209ENST00000616395 LRRC7Q96NW7 1537 aa28.44■■■□□ 2.14
TRAPPC3-209ENST00000616395 FAM135AQ9P2D6 1515 aa28.44■■■□□ 2.14
TRAPPC3-209ENST00000616395 TIAM1Q13009 1591 aa28.43■■■□□ 2.14
TRAPPC3-209ENST00000616395 RGS17Q9UGC6 210 aaPredicted RBP28.43■■■□□ 2.14
TRAPPC3-209ENST00000616395 IQGAP1P46940 1657 aa28.42■■■□□ 2.14
TRAPPC3-209ENST00000616395 STRCP1A6NGW2 1772 aa28.42■■■□□ 2.14
TRAPPC3-209ENST00000616395 RNF17Q9BXT8 1623 aaKnown RBP28.4■■■□□ 2.14
TRAPPC3-209ENST00000616395 SYNMO15061 1565 aa28.35■■■□□ 2.13
TRAPPC3-209ENST00000616395 CCDC141Q6ZP82 1450 aa28.33■■■□□ 2.13
TRAPPC3-209ENST00000616395 EHBP1L1Q8N3D4 1523 aa28.29■■■□□ 2.12
TRAPPC3-209ENST00000616395 CEP162Q5TB80 1403 aa28.27■■■□□ 2.12
TRAPPC3-209ENST00000616395 CAMSAP2Q08AD1 1489 aa28.25■■■□□ 2.11
TRAPPC3-209ENST00000616395 ZC3H13Q5T200 1668 aaKnown RBP28.24■■■□□ 2.11
TRAPPC3-209ENST00000616395 RSPH4AQ5TD94 716 aa28.23■■■□□ 2.11
TRAPPC3-209ENST00000616395 POTEAQ6S8J7 498 aa28.22■■■□□ 2.11
TRAPPC3-209ENST00000616395 ABCC3O15438 1527 aa28.21■■■□□ 2.11
TRAPPC3-209ENST00000616395 ERVK-7P63135 1459 aa28.21■■■□□ 2.11
TRAPPC3-209ENST00000616395 SCAF11Q99590 1463 aaKnown RBP28.19■■■□□ 2.1
TRAPPC3-209ENST00000616395 TSPY4P0CV99 314 aa28.16■■■□□ 2.1
TRAPPC3-209ENST00000616395 TSPY10P0CW01 314 aa28.16■■■□□ 2.1
TRAPPC3-209ENST00000616395 LTKP29376 864 aa28.16■■■□□ 2.1
TRAPPC3-209ENST00000616395 UBR1Q8IWV7 1749 aa28.15■■■□□ 2.1
TRAPPC3-209ENST00000616395 XIRP1Q702N8 1843 aaKnown RBP28.15■■■□□ 2.1
TRAPPC3-209ENST00000616395 NCOA2Q15596 1464 aa28.14■■■□□ 2.1
TRAPPC3-209ENST00000616395 FAM135BQ49AJ0 1406 aa28.14■■■□□ 2.09
TRAPPC3-209ENST00000616395 ARHGEF5Q12774 1597 aa28.13■■■□□ 2.09
TRAPPC3-209ENST00000616395 TXNDC2Q86VQ3 553 aa28.13■■■□□ 2.09
TRAPPC3-209ENST00000616395 ARHGAP23Q9P227 1491 aa28.11■■■□□ 2.09
TRAPPC3-209ENST00000616395 SLIT1O75093 1534 aa28.09■■■□□ 2.09
TRAPPC3-209ENST00000616395 MROH1Q8NDA8 1641 aa28.07■■■□□ 2.08
TRAPPC3-209ENST00000616395 EIF2AK4Q9P2K8 1649 aaKnown RBP28.04■■■□□ 2.08
TRAPPC3-209ENST00000616395 EID1Q9Y6B2 187 aa28.04■■■□□ 2.08
TRAPPC3-209ENST00000616395 CEP152O94986 1710 aa28.04■■■□□ 2.08
TRAPPC3-209ENST00000616395 TMEM94Q12767 1356 aa28.04■■■□□ 2.08
TRAPPC3-209ENST00000616395 MAST1Q9Y2H9 1570 aa28.01■■■□□ 2.07
TRAPPC3-209ENST00000616395 CFAP65Q6ZU64 1925 aaKnown RBP28.01■■■□□ 2.07
TRAPPC3-209ENST00000616395 ROBO1Q9Y6N7 1651 aa28.01■■■□□ 2.07
TRAPPC3-209ENST00000616395 SETD1AO15047 1707 aaKnown RBP28.01■■■□□ 2.07
TRAPPC3-209ENST00000616395 RBM33Q96EV2 1170 aaKnown RBP27.98■■■□□ 2.07
TRAPPC3-209ENST00000616395 TMEM2Q9UHN6 1383 aa27.96■■■□□ 2.07
TRAPPC3-209ENST00000616395 MAP3K1Q13233 1512 aa27.96■■■□□ 2.07
TRAPPC3-209ENST00000616395 KCNA6P17658 529 aa27.94■■■□□ 2.06
TRAPPC3-209ENST00000616395 PROSER2Q86WR7 435 aaPredicted RBP27.94■■■□□ 2.06
TRAPPC3-209ENST00000616395 ARHGAP31Q2M1Z3 1444 aa27.94■■■□□ 2.06
TRAPPC3-209ENST00000616395 PIK3C2BO00750 1634 aa27.93■■■□□ 2.06
TRAPPC3-209ENST00000616395 LRRC9Q6ZRR7 1453 aa27.91■■■□□ 2.06
TRAPPC3-209ENST00000616395 SLC26A8Q96RN1 970 aa27.91■■■□□ 2.06
TRAPPC3-209ENST00000616395 STAG3Q9UJ98 1225 aa27.9■■■□□ 2.06
TRAPPC3-209ENST00000616395 DUOX2Q9NRD8 1548 aa27.89■■■□□ 2.06
TRAPPC3-209ENST00000616395 PRDM15P57071 1507 aaPredicted RBP27.87■■■□□ 2.05
TRAPPC3-209ENST00000616395 JCADQ9P266 1359 aa27.87■■■□□ 2.05
TRAPPC3-209ENST00000616395 TET3O43151 1660 aa27.86■■■□□ 2.05
TRAPPC3-209ENST00000616395 EFCAB6Q5THR3 1501 aa27.85■■■□□ 2.05
TRAPPC3-209ENST00000616395 PHLPP1O60346 1717 aa27.85■■■□□ 2.05
TRAPPC3-209ENST00000616395 SLAIN2Q9P270 581 aa27.84■■■□□ 2.05
TRAPPC3-209ENST00000616395 MSH6P52701 1360 aa27.83■■■□□ 2.05
TRAPPC3-209ENST00000616395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.83■■■□□ 2.05
TRAPPC3-209ENST00000616395 IDI1Q13907 227 aa27.82■■■□□ 2.04
TRAPPC3-209ENST00000616395 UPF1Q92900 1129 aaKnown RBP eCLIP27.82■■■□□ 2.043e-20■■■□□ 17.9
TRAPPC3-209ENST00000616395 NKTRP30414 1462 aaKnown RBP27.82■■■□□ 2.04
TRAPPC3-209ENST00000616395 KIF15Q9NS87 1388 aa27.8■■■□□ 2.04
TRAPPC3-209ENST00000616395 NWD1Q149M9 1564 aa27.8■■■□□ 2.04
TRAPPC3-209ENST00000616395 KDM5AP29375 1690 aaKnown RBP27.79■■■□□ 2.04
TRAPPC3-209ENST00000616395 MYOM3Q5VTT5 1437 aa27.78■■■□□ 2.04
TRAPPC3-209ENST00000616395 ERBINQ96RT1 1412 aa27.78■■■□□ 2.04
TRAPPC3-209ENST00000616395 RRP7BPQ9NSQ0 103 aa27.77■■■□□ 2.04
TRAPPC3-209ENST00000616395 LRP6O75581 1613 aa27.76■■■□□ 2.03
TRAPPC3-209ENST00000616395 TRIM52Q96A61 297 aa27.76■■■□□ 2.03
TRAPPC3-209ENST00000616395 COL16A1Q07092 1604 aaPredicted RBP27.75■■■□□ 2.03
TRAPPC3-209ENST00000616395 BCANQ96GW7 911 aa27.73■■■□□ 2.03
TRAPPC3-209ENST00000616395 KANK1Q14678 1352 aa27.73■■■□□ 2.03
TRAPPC3-209ENST00000616395 MEX3CQ5U5Q3 659 aaKnown RBP27.72■■■□□ 2.03
TRAPPC3-209ENST00000616395 SPATA31A6Q5VVP1 1343 aa27.71■■■□□ 2.03
TRAPPC3-209ENST00000616395 ZNF772Q68DY9 489 aaPredicted RBP27.71■■■□□ 2.03
TRAPPC3-209ENST00000616395 KANK4Q5T7N3 995 aaPredicted RBP27.69■■■□□ 2.02
TRAPPC3-209ENST00000616395 ADGRB3O60242 1522 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms