RNA–Protein interactions for RNA: ENST00000616278.4

DDB2-211, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 960 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-211ENST00000616278 CLTCQ00610 1675 aaKnown RBP17.3■□□□□ 0.36
DDB2-211ENST00000616278 KIF3BO15066 747 aa17.3■□□□□ 0.36
DDB2-211ENST00000616278 C3P01024 1663 aa17.29■□□□□ 0.36
DDB2-211ENST00000616278 GGT6Q6P531 493 aa17.29■□□□□ 0.36
DDB2-211ENST00000616278 RRP7BPQ9NSQ0 103 aa17.29■□□□□ 0.36
DDB2-211ENST00000616278 CHIC2Q9UKJ5 165 aa17.29■□□□□ 0.36
DDB2-211ENST00000616278 DEPDC5O75140 1603 aa17.28■□□□□ 0.36
DDB2-211ENST00000616278 KDM5DQ9BY66 1539 aa17.27■□□□□ 0.36
DDB2-211ENST00000616278 SETD1BQ9UPS6 1966 aaKnown RBP17.26■□□□□ 0.35
DDB2-211ENST00000616278 PTPRKQ15262 1439 aa17.26■□□□□ 0.35
DDB2-211ENST00000616278 PRDM15P57071 1507 aaPredicted RBP17.25■□□□□ 0.35
DDB2-211ENST00000616278 ANKRD50Q9ULJ7 1429 aa17.23■□□□□ 0.35
DDB2-211ENST00000616278 MROH1Q8NDA8 1641 aa17.23■□□□□ 0.35
DDB2-211ENST00000616278 ITGAEP38570 1179 aa17.22■□□□□ 0.35
DDB2-211ENST00000616278 ZMYM3Q14202 1370 aa17.22■□□□□ 0.35
DDB2-211ENST00000616278 PREX1Q8TCU6 1659 aa17.22■□□□□ 0.35
DDB2-211ENST00000616278 WASHC2CQ9Y4E1 1318 aa17.21■□□□□ 0.35
DDB2-211ENST00000616278 GCC2Q8IWJ2 1684 aa17.21■□□□□ 0.35
DDB2-211ENST00000616278 CEP152O94986 1710 aa17.21■□□□□ 0.35
DDB2-211ENST00000616278 NPATQ14207 1427 aa17.21■□□□□ 0.34
DDB2-211ENST00000616278 KANK1Q14678 1352 aa17.2■□□□□ 0.34
DDB2-211ENST00000616278 CAMSAP1Q5T5Y3 1602 aa17.18■□□□□ 0.34
DDB2-211ENST00000616278 ABCC3O15438 1527 aa17.18■□□□□ 0.34
DDB2-211ENST00000616278 UNC13BO14795 1591 aa17.18■□□□□ 0.34
DDB2-211ENST00000616278 VWDEQ8N2E2 1590 aa17.17■□□□□ 0.34
DDB2-211ENST00000616278 PZPP20742 1482 aa17.16■□□□□ 0.34
DDB2-211ENST00000616278 LMTK2Q8IWU2 1503 aa17.16■□□□□ 0.34
DDB2-211ENST00000616278 CEBPAP49715 358 aaPredicted RBP17.15■□□□□ 0.34
DDB2-211ENST00000616278 HFM1A2PYH4 1435 aa17.13■□□□□ 0.33
DDB2-211ENST00000616278 ARHGAP31Q2M1Z3 1444 aa17.13■□□□□ 0.33
DDB2-211ENST00000616278 PLPPR3Q6T4P5 718 aa17.13■□□□□ 0.33
DDB2-211ENST00000616278 NAIPQ13075 1403 aa17.13■□□□□ 0.33
DDB2-211ENST00000616278 UHRF1BP1Q6BDS2 1440 aa17.13■□□□□ 0.33
DDB2-211ENST00000616278 IQGAP3Q86VI3 1631 aa17.12■□□□□ 0.33
DDB2-211ENST00000616278 LMTK3Q96Q04 1460 aa17.12■□□□□ 0.33
DDB2-211ENST00000616278 TET3O43151 1660 aa17.11■□□□□ 0.33
DDB2-211ENST00000616278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.11■□□□□ 0.333e-7■■■□□ 18.8
DDB2-211ENST00000616278 ACIN1Q9UKV3 1341 aaKnown RBP17.11■□□□□ 0.33
DDB2-211ENST00000616278 ZNF142P52746 1687 aaPredicted RBP17.1■□□□□ 0.33
DDB2-211ENST00000616278 MYO3AQ8NEV4 1616 aa17.1■□□□□ 0.33
DDB2-211ENST00000616278 EFCAB6Q5THR3 1501 aa17.09■□□□□ 0.33
DDB2-211ENST00000616278 SPATA31D1Q6ZQQ2 1576 aa17.09■□□□□ 0.33
DDB2-211ENST00000616278 CFAP65Q6ZU64 1925 aaKnown RBP17.08■□□□□ 0.33
DDB2-211ENST00000616278 RPRD2Q5VT52 1461 aaKnown RBP17.08■□□□□ 0.32
DDB2-211ENST00000616278 ERVK-7P63135 1459 aa17.05■□□□□ 0.32
DDB2-211ENST00000616278 NLRP1Q9C000 1473 aa17.05■□□□□ 0.32
DDB2-211ENST00000616278 TNRQ92752 1358 aa17.04■□□□□ 0.32
DDB2-211ENST00000616278 CEP170BQ9Y4F5 1589 aaPredicted RBP17.04■□□□□ 0.32
DDB2-211ENST00000616278 NUP155O75694 1391 aa17.03■□□□□ 0.32
DDB2-211ENST00000616278 E9PCH4 1651 aa17.02■□□□□ 0.32
DDB2-211ENST00000616278 A2ML1A8K2U0 1454 aa17.02■□□□□ 0.32
DDB2-211ENST00000616278 FBXO31Q5XUX0 539 aaPredicted RBP17.02■□□□□ 0.32
DDB2-211ENST00000616278 KDM5AP29375 1690 aaKnown RBP17.01■□□□□ 0.31
DDB2-211ENST00000616278 SETD5Q9C0A6 1442 aa16.99■□□□□ 0.31
DDB2-211ENST00000616278 NOS1P29475 1434 aa16.98■□□□□ 0.31
DDB2-211ENST00000616278 PLA2R1Q13018 1463 aa16.97■□□□□ 0.31
DDB2-211ENST00000616278 UGGT1Q9NYU2 1555 aa16.97■□□□□ 0.31
DDB2-211ENST00000616278 SPHKAPQ2M3C7 1700 aa16.96■□□□□ 0.31
DDB2-211ENST00000616278 UBR1Q8IWV7 1749 aa16.96■□□□□ 0.3
DDB2-211ENST00000616278 STRCQ7RTU9 1775 aa16.95■□□□□ 0.3
DDB2-211ENST00000616278 SYNMO15061 1565 aa16.95■□□□□ 0.3
DDB2-211ENST00000616278 HRCP23327 699 aa16.95■□□□□ 0.3
DDB2-211ENST00000616278 TRIM52Q96A61 297 aa16.95■□□□□ 0.3
DDB2-211ENST00000616278 SLC52A1Q9NWF4 448 aa16.95■□□□□ 0.3
DDB2-211ENST00000616278 HSPA2P54652 639 aa16.94■□□□□ 0.3
DDB2-211ENST00000616278 THEMISQ8N1K5 641 aaPredicted RBP16.94■□□□□ 0.3
DDB2-211ENST00000616278 POLR1AO95602 1720 aaPredicted RBP16.93■□□□□ 0.3
DDB2-211ENST00000616278 PIK3C2BO00750 1634 aa16.93■□□□□ 0.3
DDB2-211ENST00000616278 DMRT2Q9Y5R5 561 aa16.93■□□□□ 0.3
DDB2-211ENST00000616278 RAB3GAP2Q9H2M9 1393 aa16.9■□□□□ 0.3
DDB2-211ENST00000616278 PKD2Q13563 968 aa16.9■□□□□ 0.3
DDB2-211ENST00000616278 SLC4A1APQ9BWU0 796 aaKnown RBP16.9■□□□□ 0.3
DDB2-211ENST00000616278 PTPRTO14522 1441 aa16.88■□□□□ 0.29
DDB2-211ENST00000616278 ADGRB3O60242 1522 aa16.88■□□□□ 0.29
DDB2-211ENST00000616278 TRPM2O94759 1503 aa16.87■□□□□ 0.29
DDB2-211ENST00000616278 IDI1Q13907 227 aa16.87■□□□□ 0.29
DDB2-211ENST00000616278 STAG3Q9UJ98 1225 aa16.87■□□□□ 0.29
DDB2-211ENST00000616278 KIF1BO60333 1816 aa16.86■□□□□ 0.29
DDB2-211ENST00000616278 SLIT1O75093 1534 aa16.86■□□□□ 0.29
DDB2-211ENST00000616278 TRIM26Q12899 539 aaPredicted RBP16.86■□□□□ 0.29
DDB2-211ENST00000616278 MYO5BQ9ULV0 1848 aa16.86■□□□□ 0.29
DDB2-211ENST00000616278 TMEM131LA2VDJ0 1609 aa16.85■□□□□ 0.29
DDB2-211ENST00000616278 MPHOSPH9Q99550 1183 aa16.85■□□□□ 0.29
DDB2-211ENST00000616278 ANKLE2Q86XL3 938 aa16.84■□□□□ 0.29
DDB2-211ENST00000616278 ARHGAP23Q9P227 1491 aa16.84■□□□□ 0.29
DDB2-211ENST00000616278 MED14O60244 1454 aa16.82■□□□□ 0.28
DDB2-211ENST00000616278 HDGFP51858 240 aaKnown RBP16.81■□□□□ 0.28
DDB2-211ENST00000616278 CLTCL1P53675 1640 aa16.81■□□□□ 0.28
DDB2-211ENST00000616278 NEURL4Q96JN8 1562 aa16.81■□□□□ 0.28
DDB2-211ENST00000616278 TMEM2Q9UHN6 1383 aa16.8■□□□□ 0.28
DDB2-211ENST00000616278 EID1Q9Y6B2 187 aa16.8■□□□□ 0.28
DDB2-211ENST00000616278 IQGAP1P46940 1657 aa16.8■□□□□ 0.28
DDB2-211ENST00000616278 SCAF11Q99590 1463 aaKnown RBP16.79■□□□□ 0.28
DDB2-211ENST00000616278 NCKAP5LQ9HCH0 1330 aa16.78■□□□□ 0.28
DDB2-211ENST00000616278 TXNDC2Q86VQ3 553 aa16.76■□□□□ 0.27
DDB2-211ENST00000616278 NPHP4O75161 1426 aaPredicted RBP16.76■□□□□ 0.27
DDB2-211ENST00000616278 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.75■□□□□ 0.27
DDB2-211ENST00000616278 CCDC144AA2RUR9 1427 aa16.75■□□□□ 0.27
DDB2-211ENST00000616278 ZFYVE9O95405 1425 aa16.74■□□□□ 0.27
DDB2-211ENST00000616278 CHGAP10645 457 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms