RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 ZC3H13Q5T200 1668 aaKnown RBP13.72□□□□□ -0.21
MMP28-205ENST00000615317 IQGAP3Q86VI3 1631 aa13.7□□□□□ -0.22
MMP28-205ENST00000615317 SETD5Q9C0A6 1442 aa13.7□□□□□ -0.22
MMP28-205ENST00000615317 RAB3GAP2Q9H2M9 1393 aa13.7□□□□□ -0.22
MMP28-205ENST00000615317 CLTCQ00610 1675 aaKnown RBP13.69□□□□□ -0.22
MMP28-205ENST00000615317 DHX29Q7Z478 1369 aaKnown RBP13.69□□□□□ -0.22
MMP28-205ENST00000615317 CAMSAP1Q5T5Y3 1602 aa13.68□□□□□ -0.22
MMP28-205ENST00000615317 KDM5DQ9BY66 1539 aa13.68□□□□□ -0.22
MMP28-205ENST00000615317 MADDQ8WXG6 1647 aa13.68□□□□□ -0.22
MMP28-205ENST00000615317 RIMS1Q86UR5 1692 aaKnown RBP13.66□□□□□ -0.22
MMP28-205ENST00000615317 VWDEQ8N2E2 1590 aa13.66□□□□□ -0.22
MMP28-205ENST00000615317 TET3O43151 1660 aa13.66□□□□□ -0.22
MMP28-205ENST00000615317 ABCC3O15438 1527 aa13.64□□□□□ -0.23
MMP28-205ENST00000615317 FAM135AQ9P2D6 1515 aa13.64□□□□□ -0.23
MMP28-205ENST00000615317 ADAMTSL3P82987 1691 aa13.64□□□□□ -0.23
MMP28-205ENST00000615317 MROH2AA6NES4 1674 aa13.63□□□□□ -0.23
MMP28-205ENST00000615317 EFCAB6Q5THR3 1501 aa13.63□□□□□ -0.23
MMP28-205ENST00000615317 E9PCH4 1651 aa13.63□□□□□ -0.23
MMP28-205ENST00000615317 KIF3BO15066 747 aa13.62□□□□□ -0.23
MMP28-205ENST00000615317 ARID4BQ4LE39 1312 aaPredicted RBP13.62□□□□□ -0.23
MMP28-205ENST00000615317 PZPP20742 1482 aa13.61□□□□□ -0.23
MMP28-205ENST00000615317 C3P01024 1663 aa13.59□□□□□ -0.23
MMP28-205ENST00000615317 LMTK2Q8IWU2 1503 aa13.59□□□□□ -0.23
MMP28-205ENST00000615317 SPHKAPQ2M3C7 1700 aa13.59□□□□□ -0.23
MMP28-205ENST00000615317 MLECQ14165 292 aa13.59□□□□□ -0.23
MMP28-205ENST00000615317 PREX1Q8TCU6 1659 aa13.58□□□□□ -0.24
MMP28-205ENST00000615317 GGT6Q6P531 493 aa13.57□□□□□ -0.24
MMP28-205ENST00000615317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.57□□□□□ -0.24
MMP28-205ENST00000615317 NUP155O75694 1391 aa13.57□□□□□ -0.24
MMP28-205ENST00000615317 KANK1Q14678 1352 aa13.57□□□□□ -0.24
MMP28-205ENST00000615317 CFAP65Q6ZU64 1925 aaKnown RBP13.56□□□□□ -0.24
MMP28-205ENST00000615317 TRIM52Q96A61 297 aa13.55□□□□□ -0.24
MMP28-205ENST00000615317 CNTLNQ9NXG0 1405 aa13.52□□□□□ -0.25
MMP28-205ENST00000615317 MYO3AQ8NEV4 1616 aa13.51□□□□□ -0.25
MMP28-205ENST00000615317 SYNMO15061 1565 aa13.51□□□□□ -0.25
MMP28-205ENST00000615317 NPATQ14207 1427 aa13.51□□□□□ -0.25
MMP28-205ENST00000615317 DHX57Q6P158 1386 aaKnown RBP13.51□□□□□ -0.25
MMP28-205ENST00000615317 TRPM2O94759 1503 aa13.5□□□□□ -0.25
MMP28-205ENST00000615317 CLTCL1P53675 1640 aa13.5□□□□□ -0.25
MMP28-205ENST00000615317 SPATA31D1Q6ZQQ2 1576 aa13.49□□□□□ -0.25
MMP28-205ENST00000615317 RPRD2Q5VT52 1461 aaKnown RBP13.49□□□□□ -0.25
MMP28-205ENST00000615317 WASHC2CQ9Y4E1 1318 aa13.49□□□□□ -0.25
MMP28-205ENST00000615317 UGGT1Q9NYU2 1555 aa13.49□□□□□ -0.25
MMP28-205ENST00000615317 ERVK-7P63135 1459 aa13.48□□□□□ -0.25
MMP28-205ENST00000615317 PIK3C2BO00750 1634 aa13.47□□□□□ -0.25
MMP28-205ENST00000615317 HRCP23327 699 aa13.47□□□□□ -0.25
MMP28-205ENST00000615317 SLC4A1APQ9BWU0 796 aaKnown RBP13.47□□□□□ -0.25
MMP28-205ENST00000615317 ESF1Q9H501 851 aaKnown RBP13.47□□□□□ -0.25
MMP28-205ENST00000615317 PTPRMP28827 1452 aa13.47□□□□□ -0.25
MMP28-205ENST00000615317 ARHGAP31Q2M1Z3 1444 aa13.47□□□□□ -0.25
MMP28-205ENST00000615317 MYO5BQ9ULV0 1848 aa13.46□□□□□ -0.25
MMP28-205ENST00000615317 ZNF142P52746 1687 aaPredicted RBP13.46□□□□□ -0.26
MMP28-205ENST00000615317 ACIN1Q9UKV3 1341 aaKnown RBP13.45□□□□□ -0.26
MMP28-205ENST00000615317 MPHOSPH9Q99550 1183 aa13.45□□□□□ -0.26
MMP28-205ENST00000615317 KIF1BO60333 1816 aa13.45□□□□□ -0.26
MMP28-205ENST00000615317 PKD2Q13563 968 aa13.44□□□□□ -0.26
MMP28-205ENST00000615317 FOXD1Q16676 465 aa13.44□□□□□ -0.26
MMP28-205ENST00000615317 PLPPR3Q6T4P5 718 aa13.43□□□□□ -0.26
MMP28-205ENST00000615317 PPP6R1Q9UPN7 881 aa13.43□□□□□ -0.26
MMP28-205ENST00000615317 ZMYM3Q14202 1370 aa13.43□□□□□ -0.26
MMP28-205ENST00000615317 NOS1P29475 1434 aa13.42□□□□□ -0.26
MMP28-205ENST00000615317 PLA2R1Q13018 1463 aa13.42□□□□□ -0.26
MMP28-205ENST00000615317 ADGRB3O60242 1522 aa13.41□□□□□ -0.26
MMP28-205ENST00000615317 UBR1Q8IWV7 1749 aa13.41□□□□□ -0.26
MMP28-205ENST00000615317 CEP170BQ9Y4F5 1589 aaPredicted RBP13.41□□□□□ -0.26
MMP28-205ENST00000615317 PTPRTO14522 1441 aa13.4□□□□□ -0.26
MMP28-205ENST00000615317 IFT172Q9UG01 1749 aa13.39□□□□□ -0.27
MMP28-205ENST00000615317 CCDC144AA2RUR9 1427 aa13.39□□□□□ -0.27
MMP28-205ENST00000615317 KDM5AP29375 1690 aaKnown RBP13.38□□□□□ -0.27
MMP28-205ENST00000615317 TNRQ92752 1358 aa13.38□□□□□ -0.27
MMP28-205ENST00000615317 KDM4FA0A1W2PPD8 638 aa13.38□□□□□ -0.27
MMP28-205ENST00000615317 CEBPAP49715 358 aaPredicted RBP13.38□□□□□ -0.27
MMP28-205ENST00000615317 TMEM131LA2VDJ0 1609 aa13.38□□□□□ -0.27
MMP28-205ENST00000615317 ANKRD30BQ9BXX2 1392 aa13.37□□□□□ -0.27
MMP28-205ENST00000615317 FBXO31Q5XUX0 539 aaPredicted RBP13.37□□□□□ -0.27
MMP28-205ENST00000615317 CCER1Q8TC90 406 aaPredicted RBP13.37□□□□□ -0.27
MMP28-205ENST00000615317 NLRP1Q9C000 1473 aa13.36□□□□□ -0.27
MMP28-205ENST00000615317 PPLO60437 1756 aa13.35□□□□□ -0.27
MMP28-205ENST00000615317 POLR1AO95602 1720 aaPredicted RBP13.33□□□□□ -0.27
MMP28-205ENST00000615317 NEURL4Q96JN8 1562 aa13.32□□□□□ -0.28
MMP28-205ENST00000615317 A2ML1A8K2U0 1454 aa13.32□□□□□ -0.28
MMP28-205ENST00000615317 SETD1BQ9UPS6 1966 aaKnown RBP13.32□□□□□ -0.28
MMP28-205ENST00000615317 UHRF1BP1Q6BDS2 1440 aa13.31□□□□□ -0.28
MMP28-205ENST00000615317 NEXMIFQ5QGS0 1516 aa13.3□□□□□ -0.28
MMP28-205ENST00000615317 SPATA31E1Q6ZUB1 1445 aa13.3□□□□□ -0.28
MMP28-205ENST00000615317 LMTK3Q96Q04 1460 aa13.29□□□□□ -0.28
MMP28-205ENST00000615317 SIN3AQ96ST3 1273 aa13.28□□□□□ -0.28
MMP28-205ENST00000615317 CLSPNQ9HAW4 1339 aa13.28□□□□□ -0.28
MMP28-205ENST00000615317 IQGAP1P46940 1657 aa13.28□□□□□ -0.28
MMP28-205ENST00000615317 CHGAP10645 457 aaKnown RBP13.26□□□□□ -0.29
MMP28-205ENST00000615317 NEUROD1Q13562 356 aa13.26□□□□□ -0.29
MMP28-205ENST00000615317 TONSLQ96HA7 1378 aa13.25□□□□□ -0.29
MMP28-205ENST00000615317 IDI1Q13907 227 aa13.25□□□□□ -0.29
MMP28-205ENST00000615317 SLC52A1Q9NWF4 448 aa13.25□□□□□ -0.29
MMP28-205ENST00000615317 SLIT1O75093 1534 aa13.24□□□□□ -0.29
MMP28-205ENST00000615317 MYOM2P54296 1465 aa13.23□□□□□ -0.29
MMP28-205ENST00000615317 STAG3Q9UJ98 1225 aa13.23□□□□□ -0.29
MMP28-205ENST00000615317 NRXN3Q9Y4C0 1643 aa13.23□□□□□ -0.29
MMP28-205ENST00000615317 ARHGAP23Q9P227 1491 aa13.23□□□□□ -0.29
MMP28-205ENST00000615317 ZFYVE9O95405 1425 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms