RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 SPAG9O60271 1321 aaKnown RBP17.4■□□□□ 0.38
SLIRP-212ENST00000613856 A2MP01023 1474 aa17.38■□□□□ 0.37
SLIRP-212ENST00000613856 NEURL4Q96JN8 1562 aa17.38■□□□□ 0.37
SLIRP-212ENST00000613856 HSPA1LP34931 641 aa17.38■□□□□ 0.37
SLIRP-212ENST00000613856 DNMT1P26358 1616 aaKnown RBP17.38■□□□□ 0.37
SLIRP-212ENST00000613856 GGT6Q6P531 493 aa17.37■□□□□ 0.37
SLIRP-212ENST00000613856 PCGF6Q9BYE7 350 aa17.37■□□□□ 0.37
SLIRP-212ENST00000613856 POLR1AO95602 1720 aaPredicted RBP17.37■□□□□ 0.37
SLIRP-212ENST00000613856 CAMSAP2Q08AD1 1489 aa17.36■□□□□ 0.37
SLIRP-212ENST00000613856 PIP4K2BP78356 416 aa17.35■□□□□ 0.37
SLIRP-212ENST00000613856 PKD2Q13563 968 aa17.35■□□□□ 0.37
SLIRP-212ENST00000613856 PPP6R1Q9UPN7 881 aa17.35■□□□□ 0.37
SLIRP-212ENST00000613856 SCAF1Q9H7N4 1312 aaKnown RBP17.35■□□□□ 0.37
SLIRP-212ENST00000613856 ALKQ9UM73 1620 aa17.35■□□□□ 0.37
SLIRP-212ENST00000613856 ADGBQ8N7X0 1667 aa17.33■□□□□ 0.37
SLIRP-212ENST00000613856 A2ML1A8K2U0 1454 aa17.32■□□□□ 0.36
SLIRP-212ENST00000613856 CFDP1Q9UEE9 299 aaPredicted RBP17.32■□□□□ 0.36
SLIRP-212ENST00000613856 CROCC2H7BZ55 1655 aa17.32■□□□□ 0.36
SLIRP-212ENST00000613856 ZNF644Q9H582 1327 aaPredicted RBP17.31■□□□□ 0.36
SLIRP-212ENST00000613856 FAM50AQ14320 339 aaKnown RBP17.3■□□□□ 0.36
SLIRP-212ENST00000613856 ARHGEF5Q12774 1597 aa17.3■□□□□ 0.36
SLIRP-212ENST00000613856 PLEKHH2Q8IVE3 1493 aa17.3■□□□□ 0.36
SLIRP-212ENST00000613856 KIAA1107Q9UPP5 1409 aa17.3■□□□□ 0.36
SLIRP-212ENST00000613856 FBXO31Q5XUX0 539 aaPredicted RBP17.29■□□□□ 0.36
SLIRP-212ENST00000613856 VWDEQ8N2E2 1590 aa17.28■□□□□ 0.36
SLIRP-212ENST00000613856 STRCP1A6NGW2 1772 aa17.28■□□□□ 0.36
SLIRP-212ENST00000613856 SHANK2Q9UPX8 1470 aa17.27■□□□□ 0.36
SLIRP-212ENST00000613856 SENP3Q9H4L4 574 aaPredicted RBP17.27■□□□□ 0.36
SLIRP-212ENST00000613856 CPS1P31327 1500 aa17.26■□□□□ 0.35
SLIRP-212ENST00000613856 MBD5Q9P267 1494 aa17.25■□□□□ 0.35
SLIRP-212ENST00000613856 DAPK1P53355 1430 aa17.25■□□□□ 0.35
SLIRP-212ENST00000613856 ABCC5O15440 1437 aa17.23■□□□□ 0.35
SLIRP-212ENST00000613856 TNRQ92752 1358 aa17.23■□□□□ 0.35
SLIRP-212ENST00000613856 CCDC141Q6ZP82 1450 aa17.22■□□□□ 0.35
SLIRP-212ENST00000613856 GCC2Q8IWJ2 1684 aa17.21■□□□□ 0.35
SLIRP-212ENST00000613856 MAST1Q9Y2H9 1570 aa17.21■□□□□ 0.35
SLIRP-212ENST00000613856 PZPP20742 1482 aa17.21■□□□□ 0.35
SLIRP-212ENST00000613856 TOM1O60784 492 aa17.2■□□□□ 0.34
SLIRP-212ENST00000613856 KDM5DQ9BY66 1539 aa17.2■□□□□ 0.34
SLIRP-212ENST00000613856 ADGRL2O95490 1459 aa17.19■□□□□ 0.34
SLIRP-212ENST00000613856 ROCK1Q13464 1354 aa17.18■□□□□ 0.34
SLIRP-212ENST00000613856 DHX29Q7Z478 1369 aaKnown RBP17.18■□□□□ 0.34
SLIRP-212ENST00000613856 IQGAP1P46940 1657 aa17.18■□□□□ 0.34
SLIRP-212ENST00000613856 HFM1A2PYH4 1435 aa17.17■□□□□ 0.34
SLIRP-212ENST00000613856 KIF3BO15066 747 aa17.17■□□□□ 0.34
SLIRP-212ENST00000613856 RSPH4AQ5TD94 716 aa17.17■□□□□ 0.34
SLIRP-212ENST00000613856 DEPDC5O75140 1603 aa17.17■□□□□ 0.34
SLIRP-212ENST00000613856 UGGT1Q9NYU2 1555 aa17.16■□□□□ 0.34
SLIRP-212ENST00000613856 NPHP4O75161 1426 aaPredicted RBP17.16■□□□□ 0.34
SLIRP-212ENST00000613856 ITGAEP38570 1179 aa17.16■□□□□ 0.34
SLIRP-212ENST00000613856 PHF23Q9BUL5 403 aaPredicted RBP17.16■□□□□ 0.34
SLIRP-212ENST00000613856 RTEL1-TNFRSF6BF6WH68 1400 aa17.15■□□□□ 0.34
SLIRP-212ENST00000613856 LRRC7Q96NW7 1537 aa17.15■□□□□ 0.34
SLIRP-212ENST00000613856 MED14O60244 1454 aa17.14■□□□□ 0.33
SLIRP-212ENST00000613856 XIRP1Q702N8 1843 aaKnown RBP17.13■□□□□ 0.33
SLIRP-212ENST00000613856 ANKLE2Q86XL3 938 aa17.13■□□□□ 0.33
SLIRP-212ENST00000613856 ZC3H13Q5T200 1668 aaKnown RBP17.13■□□□□ 0.33
SLIRP-212ENST00000613856 RNF17Q9BXT8 1623 aaKnown RBP17.12■□□□□ 0.33
SLIRP-212ENST00000613856 RGS17Q9UGC6 210 aaPredicted RBP17.12■□□□□ 0.33
SLIRP-212ENST00000613856 NAIPQ13075 1403 aa17.12■□□□□ 0.33
SLIRP-212ENST00000613856 SETD5Q9C0A6 1442 aa17.12■□□□□ 0.33
SLIRP-212ENST00000613856 CFAP65Q6ZU64 1925 aaKnown RBP17.11■□□□□ 0.33
SLIRP-212ENST00000613856 WASHC2CQ9Y4E1 1318 aa17.11■□□□□ 0.33
SLIRP-212ENST00000613856 NLRP1Q9C000 1473 aa17.11■□□□□ 0.33
SLIRP-212ENST00000613856 FAM135AQ9P2D6 1515 aa17.1■□□□□ 0.33
SLIRP-212ENST00000613856 ANKRD30AQ9BXX3 1397 aa17.09■□□□□ 0.33
SLIRP-212ENST00000613856 SYNMO15061 1565 aa17.09■□□□□ 0.33
SLIRP-212ENST00000613856 THEMISQ8N1K5 641 aaPredicted RBP17.08■□□□□ 0.32
SLIRP-212ENST00000613856 CEP152O94986 1710 aa17.07■□□□□ 0.32
SLIRP-212ENST00000613856 TSPY4P0CV99 314 aa17.07■□□□□ 0.32
SLIRP-212ENST00000613856 TSPY10P0CW01 314 aa17.07■□□□□ 0.32
SLIRP-212ENST00000613856 UBR1Q8IWV7 1749 aa17.07■□□□□ 0.32
SLIRP-212ENST00000613856 MROH1Q8NDA8 1641 aa17.07■□□□□ 0.32
SLIRP-212ENST00000613856 ABCC3O15438 1527 aa17.06■□□□□ 0.32
SLIRP-212ENST00000613856 RAB3GAP2Q9H2M9 1393 aa17.06■□□□□ 0.32
SLIRP-212ENST00000613856 HRCP23327 699 aa17.05■□□□□ 0.32
SLIRP-212ENST00000613856 CHIC2Q9UKJ5 165 aa17.05■□□□□ 0.32
SLIRP-212ENST00000613856 ERVK-7P63135 1459 aa17.04■□□□□ 0.32
SLIRP-212ENST00000613856 KIF15Q9NS87 1388 aa17.02■□□□□ 0.32
SLIRP-212ENST00000613856 DUOX2Q9NRD8 1548 aa17.02■□□□□ 0.32
SLIRP-212ENST00000613856 SETD1AO15047 1707 aaKnown RBP17.01■□□□□ 0.31
SLIRP-212ENST00000613856 RRP7BPQ9NSQ0 103 aa17.01■□□□□ 0.31
SLIRP-212ENST00000613856 ACIN1Q9UKV3 1341 aaKnown RBP17■□□□□ 0.31
SLIRP-212ENST00000613856 LTKP29376 864 aa16.99■□□□□ 0.31
SLIRP-212ENST00000613856 SCAF11Q99590 1463 aaKnown RBP16.99■□□□□ 0.31
SLIRP-212ENST00000613856 ERBINQ96RT1 1412 aa16.98■□□□□ 0.31
SLIRP-212ENST00000613856 ANKRD50Q9ULJ7 1429 aa16.98■□□□□ 0.31
SLIRP-212ENST00000613856 POTEAQ6S8J7 498 aa16.98■□□□□ 0.31
SLIRP-212ENST00000613856 EIF2AK4Q9P2K8 1649 aaKnown RBP16.97■□□□□ 0.31
SLIRP-212ENST00000613856 UNC13BO14795 1591 aa16.95■□□□□ 0.3
SLIRP-212ENST00000613856 ARHGAP23Q9P227 1491 aa16.95■□□□□ 0.3
SLIRP-212ENST00000613856 RBM33Q96EV2 1170 aaKnown RBP16.94■□□□□ 0.3
SLIRP-212ENST00000613856 PIK3C2BO00750 1634 aa16.94■□□□□ 0.3
SLIRP-212ENST00000613856 SLIT1O75093 1534 aa16.94■□□□□ 0.3
SLIRP-212ENST00000613856 ROBO1Q9Y6N7 1651 aa16.94■□□□□ 0.3
SLIRP-212ENST00000613856 DHX57Q6P158 1386 aaKnown RBP16.93■□□□□ 0.3
SLIRP-212ENST00000613856 TXNDC2Q86VQ3 553 aa16.91■□□□□ 0.3
SLIRP-212ENST00000613856 TMEM94Q12767 1356 aa16.88■□□□□ 0.29
SLIRP-212ENST00000613856 FAM135BQ49AJ0 1406 aa16.87■□□□□ 0.29
SLIRP-212ENST00000613856 PRDM15P57071 1507 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 271.3 ms