RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 FAM135AQ9P2D6 1515 aa19.97■□□□□ 0.79
MDC1-209ENST00000613547 PTPRMP28827 1452 aa19.96■□□□□ 0.79
MDC1-209ENST00000613547 FER1L4A9Z1Z3 1794 aa19.95■□□□□ 0.78
MDC1-209ENST00000613547 WASHC2CQ9Y4E1 1318 aa19.95■□□□□ 0.78
MDC1-209ENST00000613547 KANK1Q14678 1352 aa19.95■□□□□ 0.78
MDC1-209ENST00000613547 RNF17Q9BXT8 1623 aaKnown RBP19.94■□□□□ 0.78
MDC1-209ENST00000613547 RIMS1Q86UR5 1692 aaKnown RBP19.94■□□□□ 0.78
MDC1-209ENST00000613547 HFM1A2PYH4 1435 aa19.93■□□□□ 0.78
MDC1-209ENST00000613547 KDM5DQ9BY66 1539 aa19.92■□□□□ 0.78
MDC1-209ENST00000613547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.92■□□□□ 0.782e-7■■□□□ 13.4
MDC1-209ENST00000613547 NAIPQ13075 1403 aa19.91■□□□□ 0.78
MDC1-209ENST00000613547 PRDM15P57071 1507 aaPredicted RBP19.91■□□□□ 0.78
MDC1-209ENST00000613547 PLPPR3Q6T4P5 718 aa19.89■□□□□ 0.77
MDC1-209ENST00000613547 DEPDC5O75140 1603 aa19.88■□□□□ 0.77
MDC1-209ENST00000613547 ZMYM3Q14202 1370 aa19.88■□□□□ 0.77
MDC1-209ENST00000613547 MROH1Q8NDA8 1641 aa19.87■□□□□ 0.77
MDC1-209ENST00000613547 MROH2AA6NES4 1674 aa19.87■□□□□ 0.77
MDC1-209ENST00000613547 CLTCQ00610 1675 aaKnown RBP19.87■□□□□ 0.77
MDC1-209ENST00000613547 CEBPAP49715 358 aaPredicted RBP19.86■□□□□ 0.77
MDC1-209ENST00000613547 ZC3H13Q5T200 1668 aaKnown RBP19.86■□□□□ 0.77
MDC1-209ENST00000613547 GCC2Q8IWJ2 1684 aa19.86■□□□□ 0.77
MDC1-209ENST00000613547 ABCC3O15438 1527 aa19.86■□□□□ 0.77
MDC1-209ENST00000613547 UNC13BO14795 1591 aa19.83■□□□□ 0.76
MDC1-209ENST00000613547 NUP155O75694 1391 aa19.82■□□□□ 0.76
MDC1-209ENST00000613547 ACIN1Q9UKV3 1341 aaKnown RBP19.81■□□□□ 0.76
MDC1-209ENST00000613547 NPATQ14207 1427 aa19.81■□□□□ 0.76
MDC1-209ENST00000613547 VWDEQ8N2E2 1590 aa19.81■□□□□ 0.76
MDC1-209ENST00000613547 LMTK2Q8IWU2 1503 aa19.81■□□□□ 0.76
MDC1-209ENST00000613547 SETD5Q9C0A6 1442 aa19.8■□□□□ 0.76
MDC1-209ENST00000613547 C3P01024 1663 aa19.8■□□□□ 0.76
MDC1-209ENST00000613547 PZPP20742 1482 aa19.79■□□□□ 0.76
MDC1-209ENST00000613547 TRIM26Q12899 539 aaPredicted RBP19.79■□□□□ 0.76
MDC1-209ENST00000613547 TRIM52Q96A61 297 aa19.78■□□□□ 0.76
MDC1-209ENST00000613547 ARHGAP31Q2M1Z3 1444 aa19.77■□□□□ 0.76
MDC1-209ENST00000613547 CAMSAP1Q5T5Y3 1602 aa19.77■□□□□ 0.76
MDC1-209ENST00000613547 CEP152O94986 1710 aa19.76■□□□□ 0.75
MDC1-209ENST00000613547 IQGAP3Q86VI3 1631 aa19.74■□□□□ 0.75
MDC1-209ENST00000613547 FBXO31Q5XUX0 539 aaPredicted RBP19.74■□□□□ 0.75
MDC1-209ENST00000613547 EFCAB6Q5THR3 1501 aa19.74■□□□□ 0.75
MDC1-209ENST00000613547 UHRF1BP1Q6BDS2 1440 aa19.73■□□□□ 0.75
MDC1-209ENST00000613547 TNRQ92752 1358 aa19.72■□□□□ 0.75
MDC1-209ENST00000613547 RAB3GAP2Q9H2M9 1393 aa19.72■□□□□ 0.75
MDC1-209ENST00000613547 RPRD2Q5VT52 1461 aaKnown RBP19.72■□□□□ 0.75
MDC1-209ENST00000613547 TET3O43151 1660 aa19.71■□□□□ 0.75
MDC1-209ENST00000613547 ERVK-7P63135 1459 aa19.71■□□□□ 0.75
MDC1-209ENST00000613547 HRCP23327 699 aa19.69■□□□□ 0.74
MDC1-209ENST00000613547 SLC4A1APQ9BWU0 796 aaKnown RBP19.69■□□□□ 0.74
MDC1-209ENST00000613547 SPATA31D1Q6ZQQ2 1576 aa19.69■□□□□ 0.74
MDC1-209ENST00000613547 PREX1Q8TCU6 1659 aa19.68■□□□□ 0.74
MDC1-209ENST00000613547 LMTK3Q96Q04 1460 aa19.66■□□□□ 0.74
MDC1-209ENST00000613547 NLRP1Q9C000 1473 aa19.66■□□□□ 0.74
MDC1-209ENST00000613547 PKD2Q13563 968 aa19.64■□□□□ 0.73
MDC1-209ENST00000613547 NOS1P29475 1434 aa19.64■□□□□ 0.73
MDC1-209ENST00000613547 SETD1BQ9UPS6 1966 aaKnown RBP19.64■□□□□ 0.73
MDC1-209ENST00000613547 MYO3AQ8NEV4 1616 aa19.63■□□□□ 0.73
MDC1-209ENST00000613547 A2ML1A8K2U0 1454 aa19.62■□□□□ 0.73
MDC1-209ENST00000613547 MPHOSPH9Q99550 1183 aa19.61■□□□□ 0.73
MDC1-209ENST00000613547 SLC52A1Q9NWF4 448 aa19.61■□□□□ 0.73
MDC1-209ENST00000613547 CEP170BQ9Y4F5 1589 aaPredicted RBP19.61■□□□□ 0.73
MDC1-209ENST00000613547 E9PCH4 1651 aa19.6■□□□□ 0.73
MDC1-209ENST00000613547 HSPA2P54652 639 aa19.59■□□□□ 0.73
MDC1-209ENST00000613547 STAG3Q9UJ98 1225 aa19.58■□□□□ 0.72
MDC1-209ENST00000613547 ZNF142P52746 1687 aaPredicted RBP19.58■□□□□ 0.72
MDC1-209ENST00000613547 THEMISQ8N1K5 641 aaPredicted RBP19.57■□□□□ 0.72
MDC1-209ENST00000613547 SYNMO15061 1565 aa19.57■□□□□ 0.72
MDC1-209ENST00000613547 PTPRTO14522 1441 aa19.56■□□□□ 0.72
MDC1-209ENST00000613547 UGGT1Q9NYU2 1555 aa19.56■□□□□ 0.72
MDC1-209ENST00000613547 IDI1Q13907 227 aa19.55■□□□□ 0.72
MDC1-209ENST00000613547 CFAP65Q6ZU64 1925 aaKnown RBP19.53■□□□□ 0.72
MDC1-209ENST00000613547 TRPM2O94759 1503 aa19.51■□□□□ 0.71
MDC1-209ENST00000613547 FOXD1Q16676 465 aa19.51■□□□□ 0.71
MDC1-209ENST00000613547 SPHKAPQ2M3C7 1700 aa19.51■□□□□ 0.71
MDC1-209ENST00000613547 PLA2R1Q13018 1463 aa19.5■□□□□ 0.71
MDC1-209ENST00000613547 PCGF6Q9BYE7 350 aa19.5■□□□□ 0.71
MDC1-209ENST00000613547 CHGAP10645 457 aaKnown RBP19.49■□□□□ 0.71
MDC1-209ENST00000613547 PIK3C2BO00750 1634 aa19.49■□□□□ 0.71
MDC1-209ENST00000613547 ADGRB3O60242 1522 aa19.48■□□□□ 0.71
MDC1-209ENST00000613547 CCDC144AA2RUR9 1427 aa19.47■□□□□ 0.71
MDC1-209ENST00000613547 ANKLE2Q86XL3 938 aa19.46■□□□□ 0.71
MDC1-209ENST00000613547 DMRT2Q9Y5R5 561 aa19.46■□□□□ 0.71
MDC1-209ENST00000613547 KDM5AP29375 1690 aaKnown RBP19.46■□□□□ 0.71
MDC1-209ENST00000613547 UBR1Q8IWV7 1749 aa19.45■□□□□ 0.7
MDC1-209ENST00000613547 EID1Q9Y6B2 187 aa19.45■□□□□ 0.7
MDC1-209ENST00000613547 TMEM2Q9UHN6 1383 aa19.44■□□□□ 0.7
MDC1-209ENST00000613547 HDGFP51858 240 aaKnown RBP19.43■□□□□ 0.7
MDC1-209ENST00000613547 CLTCL1P53675 1640 aa19.43■□□□□ 0.7
MDC1-209ENST00000613547 NCKAP5LQ9HCH0 1330 aa19.42■□□□□ 0.7
MDC1-209ENST00000613547 SLIT1O75093 1534 aa19.41■□□□□ 0.7
MDC1-209ENST00000613547 ARHGAP23Q9P227 1491 aa19.41■□□□□ 0.7
MDC1-209ENST00000613547 TMEM131LA2VDJ0 1609 aa19.4■□□□□ 0.7
MDC1-209ENST00000613547 ZNF326Q5BKZ1 582 aaKnown RBP19.4■□□□□ 0.7
MDC1-209ENST00000613547 TXNDC2Q86VQ3 553 aa19.4■□□□□ 0.7
MDC1-209ENST00000613547 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.4■□□□□ 0.7
MDC1-209ENST00000613547 ANKRD30BQ9BXX2 1392 aa19.4■□□□□ 0.7
MDC1-209ENST00000613547 SCAF11Q99590 1463 aaKnown RBP19.39■□□□□ 0.69
MDC1-209ENST00000613547 PPP1R15AO75807 674 aaPredicted RBP19.38■□□□□ 0.69
MDC1-209ENST00000613547 RIMS2Q9UQ26 1411 aa19.37■□□□□ 0.69
MDC1-209ENST00000613547 NPHP4O75161 1426 aaPredicted RBP19.35■□□□□ 0.69
MDC1-209ENST00000613547 DHX57Q6P158 1386 aaKnown RBP19.35■□□□□ 0.69
MDC1-209ENST00000613547 LTKP29376 864 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms