RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 DUOX2Q9NRD8 1548 aa19.14■□□□□ 0.65
PRKN-210ENST00000612540 RAB3GAP2Q9H2M9 1393 aa19.13■□□□□ 0.65
PRKN-210ENST00000612540 REREQ9P2R6 1566 aa19.13■□□□□ 0.65
PRKN-210ENST00000612540 HSPA2P54652 639 aa19.12■□□□□ 0.65
PRKN-210ENST00000612540 ANKRD50Q9ULJ7 1429 aa19.11■□□□□ 0.65
PRKN-210ENST00000612540 FBXO41Q8TF61 875 aa19.11■□□□□ 0.65
PRKN-210ENST00000612540 A2MP01023 1474 aa19.09■□□□□ 0.65
PRKN-210ENST00000612540 ERBINQ96RT1 1412 aa19.08■□□□□ 0.64
PRKN-210ENST00000612540 SETD1BQ9UPS6 1966 aaKnown RBP19.07■□□□□ 0.64
PRKN-210ENST00000612540 C3P01024 1663 aa19.07■□□□□ 0.64
PRKN-210ENST00000612540 AGLP35573 1532 aa19.06■□□□□ 0.64
PRKN-210ENST00000612540 CEBPAP49715 358 aaPredicted RBP19.06■□□□□ 0.64
PRKN-210ENST00000612540 DHX29Q7Z478 1369 aaKnown RBP19.06■□□□□ 0.64
PRKN-210ENST00000612540 EIF2AK4Q9P2K8 1649 aaKnown RBP19.05■□□□□ 0.64
PRKN-210ENST00000612540 TRIM52Q96A61 297 aa19.03■□□□□ 0.64
PRKN-210ENST00000612540 STRCQ7RTU9 1775 aa19.03■□□□□ 0.64
PRKN-210ENST00000612540 KIF3BO15066 747 aa19.01■□□□□ 0.63
PRKN-210ENST00000612540 UNC13BO14795 1591 aa19■□□□□ 0.63
PRKN-210ENST00000612540 HRCP23327 699 aa18.98■□□□□ 0.63
PRKN-210ENST00000612540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.98■□□□□ 0.63
PRKN-210ENST00000612540 RNF17Q9BXT8 1623 aaKnown RBP18.97■□□□□ 0.63
PRKN-210ENST00000612540 UHRF1BP1Q6BDS2 1440 aa18.97■□□□□ 0.63
PRKN-210ENST00000612540 DEPDC5O75140 1603 aa18.96■□□□□ 0.63
PRKN-210ENST00000612540 ACIN1Q9UKV3 1341 aaKnown RBP18.96■□□□□ 0.63
PRKN-210ENST00000612540 NUP155O75694 1391 aa18.94■□□□□ 0.62
PRKN-210ENST00000612540 KANK1Q14678 1352 aa18.93■□□□□ 0.62
PRKN-210ENST00000612540 MROH1Q8NDA8 1641 aa18.93■□□□□ 0.62
PRKN-210ENST00000612540 CNTLNQ9NXG0 1405 aa18.93■□□□□ 0.62
PRKN-210ENST00000612540 MROH2AA6NES4 1674 aa18.93■□□□□ 0.62
PRKN-210ENST00000612540 GGT6Q6P531 493 aa18.93■□□□□ 0.62
PRKN-210ENST00000612540 PRDM15P57071 1507 aaPredicted RBP18.93■□□□□ 0.62
PRKN-210ENST00000612540 KDM5DQ9BY66 1539 aa18.92■□□□□ 0.62
PRKN-210ENST00000612540 ESF1Q9H501 851 aaKnown RBP18.92■□□□□ 0.62
PRKN-210ENST00000612540 IQGAP3Q86VI3 1631 aa18.92■□□□□ 0.62
PRKN-210ENST00000612540 CERKQ8TCT0 537 aa18.91■□□□□ 0.62
PRKN-210ENST00000612540 CLTCQ00610 1675 aaKnown RBP18.91■□□□□ 0.62
PRKN-210ENST00000612540 CEP152O94986 1710 aa18.91■□□□□ 0.62
PRKN-210ENST00000612540 FAM135AQ9P2D6 1515 aa18.9■□□□□ 0.62
PRKN-210ENST00000612540 DHX57Q6P158 1386 aaKnown RBP18.9■□□□□ 0.62
PRKN-210ENST00000612540 PZPP20742 1482 aa18.9■□□□□ 0.62
PRKN-210ENST00000612540 CCER1Q8TC90 406 aaPredicted RBP18.89■□□□□ 0.61
PRKN-210ENST00000612540 SLC4A1APQ9BWU0 796 aaKnown RBP18.89■□□□□ 0.61
PRKN-210ENST00000612540 DMRT2Q9Y5R5 561 aa18.88■□□□□ 0.61
PRKN-210ENST00000612540 VWDEQ8N2E2 1590 aa18.86■□□□□ 0.61
PRKN-210ENST00000612540 MPHOSPH9Q99550 1183 aa18.86■□□□□ 0.61
PRKN-210ENST00000612540 TET3O43151 1660 aa18.85■□□□□ 0.61
PRKN-210ENST00000612540 NPATQ14207 1427 aa18.85■□□□□ 0.61
PRKN-210ENST00000612540 ZC3H13Q5T200 1668 aaKnown RBP18.85■□□□□ 0.61
PRKN-210ENST00000612540 ZMYM3Q14202 1370 aa18.84■□□□□ 0.61
PRKN-210ENST00000612540 ABCC3O15438 1527 aa18.84■□□□□ 0.61
PRKN-210ENST00000612540 PTPRTO14522 1441 aa18.83■□□□□ 0.61
PRKN-210ENST00000612540 WASHC2CQ9Y4E1 1318 aa18.83■□□□□ 0.61
PRKN-210ENST00000612540 PKD2Q13563 968 aa18.82■□□□□ 0.6
PRKN-210ENST00000612540 CAMSAP1Q5T5Y3 1602 aa18.82■□□□□ 0.6
PRKN-210ENST00000612540 MYO3AQ8NEV4 1616 aa18.81■□□□□ 0.6
PRKN-210ENST00000612540 ZNF142P52746 1687 aaPredicted RBP18.8■□□□□ 0.6
PRKN-210ENST00000612540 CFAP65Q6ZU64 1925 aaKnown RBP18.8■□□□□ 0.6
PRKN-210ENST00000612540 EFCAB6Q5THR3 1501 aa18.79■□□□□ 0.6
PRKN-210ENST00000612540 LMTK2Q8IWU2 1503 aa18.79■□□□□ 0.6
PRKN-210ENST00000612540 E9PCH4 1651 aa18.79■□□□□ 0.6
PRKN-210ENST00000612540 FOXD1Q16676 465 aa18.79■□□□□ 0.6
PRKN-210ENST00000612540 PPP6R1Q9UPN7 881 aa18.77■□□□□ 0.6
PRKN-210ENST00000612540 SPHKAPQ2M3C7 1700 aa18.74■□□□□ 0.59
PRKN-210ENST00000612540 LTBP4Q8N2S1 1624 aa18.74■□□□□ 0.59
PRKN-210ENST00000612540 CEP170BQ9Y4F5 1589 aaPredicted RBP18.72■□□□□ 0.59
PRKN-210ENST00000612540 RPRD2Q5VT52 1461 aaKnown RBP18.71■□□□□ 0.59
PRKN-210ENST00000612540 PLA2R1Q13018 1463 aa18.7■□□□□ 0.58
PRKN-210ENST00000612540 CLSPNQ9HAW4 1339 aa18.7■□□□□ 0.58
PRKN-210ENST00000612540 NCKAP5LQ9HCH0 1330 aa18.69■□□□□ 0.58
PRKN-210ENST00000612540 ANKRD30BQ9BXX2 1392 aa18.68■□□□□ 0.58
PRKN-210ENST00000612540 ARHGAP31Q2M1Z3 1444 aa18.68■□□□□ 0.58
PRKN-210ENST00000612540 POLR1AO95602 1720 aaPredicted RBP18.68■□□□□ 0.58
PRKN-210ENST00000612540 IQSEC2Q5JU85 1478 aa18.66■□□□□ 0.58
PRKN-210ENST00000612540 TRPM2O94759 1503 aa18.66■□□□□ 0.58
PRKN-210ENST00000612540 NEUROD1Q13562 356 aa18.66■□□□□ 0.58
PRKN-210ENST00000612540 SIN3AQ96ST3 1273 aa18.65■□□□□ 0.58
PRKN-210ENST00000612540 CCDC144AA2RUR9 1427 aa18.65■□□□□ 0.58
PRKN-210ENST00000612540 A2ML1A8K2U0 1454 aa18.65■□□□□ 0.58
PRKN-210ENST00000612540 ERVK-7P63135 1459 aa18.65■□□□□ 0.58
PRKN-210ENST00000612540 CLTCL1P53675 1640 aa18.63■□□□□ 0.57
PRKN-210ENST00000612540 FBXO31Q5XUX0 539 aaPredicted RBP18.62■□□□□ 0.57
PRKN-210ENST00000612540 SYNMO15061 1565 aa18.62■□□□□ 0.57
PRKN-210ENST00000612540 UGGT1Q9NYU2 1555 aa18.61■□□□□ 0.57
PRKN-210ENST00000612540 NOS1P29475 1434 aa18.61■□□□□ 0.57
PRKN-210ENST00000612540 ZNF335Q9H4Z2 1342 aaPredicted RBP18.61■□□□□ 0.57
PRKN-210ENST00000612540 SPATA31D1Q6ZQQ2 1576 aa18.6■□□□□ 0.57
PRKN-210ENST00000612540 TNRQ92752 1358 aa18.6■□□□□ 0.57
PRKN-210ENST00000612540 KIF1BO60333 1816 aa18.59■□□□□ 0.57
PRKN-210ENST00000612540 TONSLQ96HA7 1378 aa18.56■□□□□ 0.56
PRKN-210ENST00000612540 DISP3Q9P2K9 1392 aa18.56■□□□□ 0.56
PRKN-210ENST00000612540 PIK3C2BO00750 1634 aa18.56■□□□□ 0.56
PRKN-210ENST00000612540 CHGAP10645 457 aaKnown RBP18.55■□□□□ 0.56
PRKN-210ENST00000612540 NEURL4Q96JN8 1562 aa18.55■□□□□ 0.56
PRKN-210ENST00000612540 NLRP1Q9C000 1473 aa18.53■□□□□ 0.56
PRKN-210ENST00000612540 ZEB1P37275 1124 aaPredicted RBP18.53■□□□□ 0.56
PRKN-210ENST00000612540 MYO5BQ9ULV0 1848 aa18.51■□□□□ 0.55
PRKN-210ENST00000612540 SLC52A1Q9NWF4 448 aa18.51■□□□□ 0.55
PRKN-210ENST00000612540 RGL3Q3MIN7 710 aa18.5■□□□□ 0.55
PRKN-210ENST00000612540 STAG3Q9UJ98 1225 aa18.5■□□□□ 0.55
PRKN-210ENST00000612540 ADGRB3O60242 1522 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms