RNA–Protein interactions for RNA: ENST00000612121.4

LTBP4-233, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-233ENST00000612121 POLR1AO95602 1720 aaPredicted RBP25.23■■□□□ 1.63
LTBP4-233ENST00000612121 RTEL1-TNFRSF6BF6WH68 1400 aa25.23■■□□□ 1.63
LTBP4-233ENST00000612121 DHX29Q7Z478 1369 aaKnown RBP25.23■■□□□ 1.63
LTBP4-233ENST00000612121 FBXO31Q5XUX0 539 aaPredicted RBP25.23■■□□□ 1.63
LTBP4-233ENST00000612121 SHANK2Q9UPX8 1470 aa25.22■■□□□ 1.63
LTBP4-233ENST00000612121 MTUS2Q5JR59 1369 aa25.22■■□□□ 1.63
LTBP4-233ENST00000612121 TNRQ92752 1358 aa25.21■■□□□ 1.63
LTBP4-233ENST00000612121 TIAM1Q13009 1591 aa25.2■■□□□ 1.62
LTBP4-233ENST00000612121 PZPP20742 1482 aa25.18■■□□□ 1.62
LTBP4-233ENST00000612121 KIF3BO15066 747 aa25.16■■□□□ 1.62
LTBP4-233ENST00000612121 VWDEQ8N2E2 1590 aa25.15■■□□□ 1.62
LTBP4-233ENST00000612121 ANKLE2Q86XL3 938 aa25.15■■□□□ 1.62
LTBP4-233ENST00000612121 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.15■■□□□ 1.62
LTBP4-233ENST00000612121 KDM5DQ9BY66 1539 aa25.14■■□□□ 1.62
LTBP4-233ENST00000612121 FAM135AQ9P2D6 1515 aa25.14■■□□□ 1.62
LTBP4-233ENST00000612121 ALKQ9UM73 1620 aa25.12■■□□□ 1.61
LTBP4-233ENST00000612121 THEMISQ8N1K5 641 aaPredicted RBP25.11■■□□□ 1.61
LTBP4-233ENST00000612121 EHBP1L1Q8N3D4 1523 aa25.11■■□□□ 1.61
LTBP4-233ENST00000612121 MIA2Q96PC5 1412 aa25.11■■□□□ 1.61
LTBP4-233ENST00000612121 WASHC2CQ9Y4E1 1318 aa25.11■■□□□ 1.61
LTBP4-233ENST00000612121 MED14O60244 1454 aa25.1■■□□□ 1.61
LTBP4-233ENST00000612121 CEP162Q5TB80 1403 aa25.1■■□□□ 1.61
LTBP4-233ENST00000612121 NLRP1Q9C000 1473 aa25.09■■□□□ 1.61
LTBP4-233ENST00000612121 NPHP4O75161 1426 aaPredicted RBP25.09■■□□□ 1.61
LTBP4-233ENST00000612121 DEPDC5O75140 1603 aa25.08■■□□□ 1.61
LTBP4-233ENST00000612121 CCDC141Q6ZP82 1450 aa25.08■■□□□ 1.6
LTBP4-233ENST00000612121 UGGT1Q9NYU2 1555 aa25.07■■□□□ 1.6
LTBP4-233ENST00000612121 RSPH4AQ5TD94 716 aa25.04■■□□□ 1.6
LTBP4-233ENST00000612121 PHF23Q9BUL5 403 aaPredicted RBP25.04■■□□□ 1.6
LTBP4-233ENST00000612121 CAMSAP2Q08AD1 1489 aa25.02■■□□□ 1.6
LTBP4-233ENST00000612121 IQGAP1P46940 1657 aa25.01■■□□□ 1.59
LTBP4-233ENST00000612121 STRCP1A6NGW2 1772 aa25■■□□□ 1.59
LTBP4-233ENST00000612121 LRRC7Q96NW7 1537 aa24.99■■□□□ 1.59
LTBP4-233ENST00000612121 NCOA2Q15596 1464 aa24.97■■□□□ 1.59
LTBP4-233ENST00000612121 ARHGEF5Q12774 1597 aa24.95■■□□□ 1.58
LTBP4-233ENST00000612121 RNF17Q9BXT8 1623 aaKnown RBP24.94■■□□□ 1.58
LTBP4-233ENST00000612121 ABCC3O15438 1527 aa24.93■■□□□ 1.58
LTBP4-233ENST00000612121 TSPY4P0CV99 314 aa24.93■■□□□ 1.58
LTBP4-233ENST00000612121 TSPY10P0CW01 314 aa24.93■■□□□ 1.58
LTBP4-233ENST00000612121 SENP3Q9H4L4 574 aaPredicted RBP24.93■■□□□ 1.58
LTBP4-233ENST00000612121 SYNMO15061 1565 aa24.93■■□□□ 1.58
LTBP4-233ENST00000612121 ERVK-7P63135 1459 aa24.89■■□□□ 1.58
LTBP4-233ENST00000612121 ZC3H13Q5T200 1668 aaKnown RBP24.89■■□□□ 1.58
LTBP4-233ENST00000612121 RGS17Q9UGC6 210 aaPredicted RBP24.87■■□□□ 1.57
LTBP4-233ENST00000612121 UBR1Q8IWV7 1749 aa24.85■■□□□ 1.57
LTBP4-233ENST00000612121 MAST1Q9Y2H9 1570 aa24.84■■□□□ 1.57
LTBP4-233ENST00000612121 SCAF11Q99590 1463 aaKnown RBP24.83■■□□□ 1.57
LTBP4-233ENST00000612121 MROH1Q8NDA8 1641 aa24.83■■□□□ 1.57
LTBP4-233ENST00000612121 EIF2AK4Q9P2K8 1649 aaKnown RBP24.83■■□□□ 1.56
LTBP4-233ENST00000612121 LTKP29376 864 aa24.82■■□□□ 1.56
LTBP4-233ENST00000612121 CFAP65Q6ZU64 1925 aaKnown RBP24.82■■□□□ 1.56
LTBP4-233ENST00000612121 ARHGAP23Q9P227 1491 aa24.8■■□□□ 1.56
LTBP4-233ENST00000612121 XIRP1Q702N8 1843 aaKnown RBP24.79■■□□□ 1.56
LTBP4-233ENST00000612121 CEP152O94986 1710 aa24.79■■□□□ 1.56
LTBP4-233ENST00000612121 SLIT1O75093 1534 aa24.79■■□□□ 1.56
LTBP4-233ENST00000612121 TXNDC2Q86VQ3 553 aa24.78■■□□□ 1.56
LTBP4-233ENST00000612121 FAM135BQ49AJ0 1406 aa24.73■■□□□ 1.55
LTBP4-233ENST00000612121 LRRC9Q6ZRR7 1453 aa24.72■■□□□ 1.55
LTBP4-233ENST00000612121 ARHGAP31Q2M1Z3 1444 aa24.72■■□□□ 1.55
LTBP4-233ENST00000612121 EID1Q9Y6B2 187 aa24.71■■□□□ 1.55
LTBP4-233ENST00000612121 DUOX2Q9NRD8 1548 aa24.71■■□□□ 1.55
LTBP4-233ENST00000612121 POTEAQ6S8J7 498 aa24.68■■□□□ 1.54
LTBP4-233ENST00000612121 PRDM15P57071 1507 aaPredicted RBP24.67■■□□□ 1.54
LTBP4-233ENST00000612121 TMEM2Q9UHN6 1383 aa24.67■■□□□ 1.54
LTBP4-233ENST00000612121 PIK3C2BO00750 1634 aa24.66■■□□□ 1.54
LTBP4-233ENST00000612121 TMEM94Q12767 1356 aa24.66■■□□□ 1.54
LTBP4-233ENST00000612121 MYOM3Q5VTT5 1437 aa24.65■■□□□ 1.54
LTBP4-233ENST00000612121 KANK4Q5T7N3 995 aaPredicted RBP24.63■■□□□ 1.53
LTBP4-233ENST00000612121 KCNA6P17658 529 aa24.62■■□□□ 1.53
LTBP4-233ENST00000612121 KIF15Q9NS87 1388 aa24.62■■□□□ 1.53
LTBP4-233ENST00000612121 VPS8Q8N3P4 1428 aa24.61■■□□□ 1.53
LTBP4-233ENST00000612121 ERBINQ96RT1 1412 aa24.61■■□□□ 1.53
LTBP4-233ENST00000612121 ROBO1Q9Y6N7 1651 aa24.6■■□□□ 1.53
LTBP4-233ENST00000612121 MAP3K1Q13233 1512 aa24.6■■□□□ 1.53
LTBP4-233ENST00000612121 STAG3Q9UJ98 1225 aa24.59■■□□□ 1.53
LTBP4-233ENST00000612121 TET3O43151 1660 aa24.59■■□□□ 1.53
LTBP4-233ENST00000612121 KDM5AP29375 1690 aaKnown RBP24.59■■□□□ 1.53
LTBP4-233ENST00000612121 EFCAB6Q5THR3 1501 aa24.58■■□□□ 1.53
LTBP4-233ENST00000612121 IDI1Q13907 227 aa24.58■■□□□ 1.53
LTBP4-233ENST00000612121 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.58■■□□□ 1.53
LTBP4-233ENST00000612121 RRP7BPQ9NSQ0 103 aa24.58■■□□□ 1.53
LTBP4-233ENST00000612121 PROSER2Q86WR7 435 aaPredicted RBP24.57■■□□□ 1.52
LTBP4-233ENST00000612121 RBM33Q96EV2 1170 aaKnown RBP24.57■■□□□ 1.52
LTBP4-233ENST00000612121 ABCC5O15440 1437 aa24.56■■□□□ 1.52
LTBP4-233ENST00000612121 SLC26A8Q96RN1 970 aa24.56■■□□□ 1.52
LTBP4-233ENST00000612121 CROCC2H7BZ55 1655 aa24.54■■□□□ 1.52
LTBP4-233ENST00000612121 KANK1Q14678 1352 aa24.53■■□□□ 1.52
LTBP4-233ENST00000612121 NKTRP30414 1462 aaKnown RBP24.51■■□□□ 1.51
LTBP4-233ENST00000612121 LMTK2Q8IWU2 1503 aa24.51■■□□□ 1.51
LTBP4-233ENST00000612121 NWD1Q149M9 1564 aa24.5■■□□□ 1.51
LTBP4-233ENST00000612121 NOS1P29475 1434 aa24.48■■□□□ 1.51
LTBP4-233ENST00000612121 MSH6P52701 1360 aa24.47■■□□□ 1.51
LTBP4-233ENST00000612121 SLAIN2Q9P270 581 aa24.47■■□□□ 1.51
LTBP4-233ENST00000612121 SETD1AO15047 1707 aaKnown RBP24.47■■□□□ 1.51
LTBP4-233ENST00000612121 DAPK1P53355 1430 aa24.46■■□□□ 1.51
LTBP4-233ENST00000612121 PHLPP1O60346 1717 aa24.46■■□□□ 1.51
LTBP4-233ENST00000612121 PTPN23Q9H3S7 1636 aa24.46■■□□□ 1.51
LTBP4-233ENST00000612121 ADGRB3O60242 1522 aa24.45■■□□□ 1.51
LTBP4-233ENST00000612121 JCADQ9P266 1359 aa24.45■■□□□ 1.5
LTBP4-233ENST00000612121 SLC52A1Q9NWF4 448 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms