RNA–Protein interactions for RNA: ENST00000611889.1

LINC01879-201, Transcript of long intergenic non-protein coding RNA 1879, humanhuman

TSL 2 BASIC

Gene LINC01879, Length 2,338 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01879-201ENST00000611889 ATP10AO60312 1499 aa16.76■□□□□ 0.27
LINC01879-201ENST00000611889 RNF17Q9BXT8 1623 aaKnown RBP16.74■□□□□ 0.27
LINC01879-201ENST00000611889 YEATS2Q9ULM3 1422 aa16.74■□□□□ 0.27
LINC01879-201ENST00000611889 DHX57Q6P158 1386 aaKnown RBP16.74■□□□□ 0.27
LINC01879-201ENST00000611889 CLSPNQ9HAW4 1339 aa16.74■□□□□ 0.27
LINC01879-201ENST00000611889 AGLP35573 1532 aa16.72■□□□□ 0.27
LINC01879-201ENST00000611889 IQGAP3Q86VI3 1631 aa16.72■□□□□ 0.27
LINC01879-201ENST00000611889 CCER1Q8TC90 406 aaPredicted RBP16.71■□□□□ 0.27
LINC01879-201ENST00000611889 TRIM52Q96A61 297 aa16.71■□□□□ 0.27
LINC01879-201ENST00000611889 PRDM15P57071 1507 aaPredicted RBP16.71■□□□□ 0.27
LINC01879-201ENST00000611889 NUP155O75694 1391 aa16.69■□□□□ 0.26
LINC01879-201ENST00000611889 KANK1Q14678 1352 aa16.68■□□□□ 0.26
LINC01879-201ENST00000611889 PZPP20742 1482 aa16.68■□□□□ 0.26
LINC01879-201ENST00000611889 FAM135AQ9P2D6 1515 aa16.68■□□□□ 0.26
LINC01879-201ENST00000611889 VWDEQ8N2E2 1590 aa16.67■□□□□ 0.26
LINC01879-201ENST00000611889 MROH1Q8NDA8 1641 aa16.67■□□□□ 0.26
LINC01879-201ENST00000611889 KIF3BO15066 747 aa16.67■□□□□ 0.26
LINC01879-201ENST00000611889 MPHOSPH9Q99550 1183 aa16.66■□□□□ 0.26
LINC01879-201ENST00000611889 ZC3H13Q5T200 1668 aaKnown RBP16.65■□□□□ 0.26
LINC01879-201ENST00000611889 SLC4A1APQ9BWU0 796 aaKnown RBP16.64■□□□□ 0.25
LINC01879-201ENST00000611889 TET3O43151 1660 aa16.64■□□□□ 0.25
LINC01879-201ENST00000611889 LMTK2Q8IWU2 1503 aa16.63■□□□□ 0.25
LINC01879-201ENST00000611889 PPP6R1Q9UPN7 881 aa16.63■□□□□ 0.25
LINC01879-201ENST00000611889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.61■□□□□ 0.25
LINC01879-201ENST00000611889 ZEB1P37275 1124 aaPredicted RBP16.59■□□□□ 0.25
LINC01879-201ENST00000611889 SIGLEC1Q9BZZ2 1709 aa16.59■□□□□ 0.25
LINC01879-201ENST00000611889 CEP152O94986 1710 aa16.58■□□□□ 0.25
LINC01879-201ENST00000611889 ABCC3O15438 1527 aa16.57■□□□□ 0.24
LINC01879-201ENST00000611889 EFCAB6Q5THR3 1501 aa16.57■□□□□ 0.24
LINC01879-201ENST00000611889 RPRD2Q5VT52 1461 aaKnown RBP16.57■□□□□ 0.24
LINC01879-201ENST00000611889 PKD2Q13563 968 aa16.57■□□□□ 0.24
LINC01879-201ENST00000611889 GGT6Q6P531 493 aa16.56■□□□□ 0.24
LINC01879-201ENST00000611889 E9PCH4 1651 aa16.56■□□□□ 0.24
LINC01879-201ENST00000611889 CAMSAP1Q5T5Y3 1602 aa16.56■□□□□ 0.24
LINC01879-201ENST00000611889 ANKRD30BQ9BXX2 1392 aa16.54■□□□□ 0.24
LINC01879-201ENST00000611889 FBXO41Q8TF61 875 aa16.54■□□□□ 0.24
LINC01879-201ENST00000611889 WASHC2CQ9Y4E1 1318 aa16.54■□□□□ 0.24
LINC01879-201ENST00000611889 ARHGAP31Q2M1Z3 1444 aa16.53■□□□□ 0.24
LINC01879-201ENST00000611889 SPHKAPQ2M3C7 1700 aa16.52■□□□□ 0.24
LINC01879-201ENST00000611889 ARID4BQ4LE39 1312 aaPredicted RBP16.51■□□□□ 0.23
LINC01879-201ENST00000611889 CNTLNQ9NXG0 1405 aa16.51■□□□□ 0.23
LINC01879-201ENST00000611889 MROH2AA6NES4 1674 aa16.5■□□□□ 0.23
LINC01879-201ENST00000611889 TIMELESSQ9UNS1 1208 aa16.5■□□□□ 0.23
LINC01879-201ENST00000611889 CLTCQ00610 1675 aaKnown RBP16.49■□□□□ 0.23
LINC01879-201ENST00000611889 TRPM2O94759 1503 aa16.49■□□□□ 0.23
LINC01879-201ENST00000611889 PTPRTO14522 1441 aa16.49■□□□□ 0.23
LINC01879-201ENST00000611889 NPATQ14207 1427 aa16.47■□□□□ 0.23
LINC01879-201ENST00000611889 FOXD1Q16676 465 aa16.47■□□□□ 0.23
LINC01879-201ENST00000611889 ESF1Q9H501 851 aaKnown RBP16.46■□□□□ 0.23
LINC01879-201ENST00000611889 FER1L4A9Z1Z3 1794 aa16.46■□□□□ 0.23
LINC01879-201ENST00000611889 CCDC144AA2RUR9 1427 aa16.46■□□□□ 0.23
LINC01879-201ENST00000611889 PLA2R1Q13018 1463 aa16.44■□□□□ 0.22
LINC01879-201ENST00000611889 PREX1Q8TCU6 1659 aa16.43■□□□□ 0.22
LINC01879-201ENST00000611889 MLECQ14165 292 aa16.42■□□□□ 0.22
LINC01879-201ENST00000611889 NOS1P29475 1434 aa16.42■□□□□ 0.22
LINC01879-201ENST00000611889 NEURL4Q96JN8 1562 aa16.42■□□□□ 0.22
LINC01879-201ENST00000611889 SIN3AQ96ST3 1273 aa16.42■□□□□ 0.22
LINC01879-201ENST00000611889 PTPRMP28827 1452 aa16.41■□□□□ 0.22
LINC01879-201ENST00000611889 ADAMTSL3P82987 1691 aa16.41■□□□□ 0.22
LINC01879-201ENST00000611889 TONSLQ96HA7 1378 aa16.4■□□□□ 0.22
LINC01879-201ENST00000611889 CFAP65Q6ZU64 1925 aaKnown RBP16.4■□□□□ 0.22
LINC01879-201ENST00000611889 SPATA31D1Q6ZQQ2 1576 aa16.4■□□□□ 0.22
LINC01879-201ENST00000611889 NEUROD1Q13562 356 aa16.4■□□□□ 0.22
LINC01879-201ENST00000611889 CLTCL1P53675 1640 aa16.39■□□□□ 0.21
LINC01879-201ENST00000611889 KIF1BO60333 1816 aa16.39■□□□□ 0.21
LINC01879-201ENST00000611889 PIK3C2BO00750 1634 aa16.39■□□□□ 0.21
LINC01879-201ENST00000611889 ZMYM3Q14202 1370 aa16.39■□□□□ 0.21
LINC01879-201ENST00000611889 ERVK-7P63135 1459 aa16.39■□□□□ 0.21
LINC01879-201ENST00000611889 SYNMO15061 1565 aa16.37■□□□□ 0.21
LINC01879-201ENST00000611889 MADDQ8WXG6 1647 aa16.36■□□□□ 0.21
LINC01879-201ENST00000611889 C3P01024 1663 aa16.36■□□□□ 0.21
LINC01879-201ENST00000611889 SLC52A1Q9NWF4 448 aa16.35■□□□□ 0.21
LINC01879-201ENST00000611889 RIMS1Q86UR5 1692 aaKnown RBP16.34■□□□□ 0.21
LINC01879-201ENST00000611889 SPATA31E1Q6ZUB1 1445 aa16.33■□□□□ 0.2
LINC01879-201ENST00000611889 STAC3Q96MF2 364 aa16.31■□□□□ 0.2
LINC01879-201ENST00000611889 KDM5AP29375 1690 aaKnown RBP16.31■□□□□ 0.2
LINC01879-201ENST00000611889 ADGRB3O60242 1522 aa16.31■□□□□ 0.2
LINC01879-201ENST00000611889 UGGT1Q9NYU2 1555 aa16.31■□□□□ 0.2
LINC01879-201ENST00000611889 LMTK3Q96Q04 1460 aa16.29■□□□□ 0.2
LINC01879-201ENST00000611889 TNRQ92752 1358 aa16.29■□□□□ 0.2
LINC01879-201ENST00000611889 L3MBTL2Q969R5 705 aa16.29■□□□□ 0.2
LINC01879-201ENST00000611889 NLRP1Q9C000 1473 aa16.28■□□□□ 0.2
LINC01879-201ENST00000611889 FBXO31Q5XUX0 539 aaPredicted RBP16.28■□□□□ 0.2
LINC01879-201ENST00000611889 PPP1R15AO75807 674 aaPredicted RBP16.28■□□□□ 0.2
LINC01879-201ENST00000611889 TMEM131LA2VDJ0 1609 aa16.27■□□□□ 0.2
LINC01879-201ENST00000611889 IFT172Q9UG01 1749 aa16.26■□□□□ 0.19
LINC01879-201ENST00000611889 IDI1Q13907 227 aa16.25■□□□□ 0.19
LINC01879-201ENST00000611889 SETD1BQ9UPS6 1966 aaKnown RBP16.25■□□□□ 0.19
LINC01879-201ENST00000611889 RPGRIP1LQ68CZ1 1315 aa16.25■□□□□ 0.19
LINC01879-201ENST00000611889 UHRF1BP1Q6BDS2 1440 aa16.25■□□□□ 0.19
LINC01879-201ENST00000611889 PPLO60437 1756 aa16.23■□□□□ 0.19
LINC01879-201ENST00000611889 MYO5BQ9ULV0 1848 aa16.23■□□□□ 0.19
LINC01879-201ENST00000611889 MYOM2P54296 1465 aa16.23■□□□□ 0.19
LINC01879-201ENST00000611889 MYO3AQ8NEV4 1616 aa16.22■□□□□ 0.19
LINC01879-201ENST00000611889 RGL3Q3MIN7 710 aa16.22■□□□□ 0.19
LINC01879-201ENST00000611889 DCAF11Q8TEB1 546 aa16.21■□□□□ 0.19
LINC01879-201ENST00000611889 UBR1Q8IWV7 1749 aa16.21■□□□□ 0.19
LINC01879-201ENST00000611889 CEBPAP49715 358 aaPredicted RBP16.2■□□□□ 0.18
LINC01879-201ENST00000611889 A2ML1A8K2U0 1454 aa16.2■□□□□ 0.18
LINC01879-201ENST00000611889 ZNF142P52746 1687 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms