RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 HRCP23327 699 aa17.93■□□□□ 0.46
CLK4-215ENST00000611733 NUP155O75694 1391 aa17.92■□□□□ 0.46
CLK4-215ENST00000611733 EIF2AK4Q9P2K8 1649 aaKnown RBP17.91■□□□□ 0.46
CLK4-215ENST00000611733 MROH1Q8NDA8 1641 aa17.91■□□□□ 0.46
CLK4-215ENST00000611733 BCORL1Q5H9F3 1711 aa17.89■□□□□ 0.45
CLK4-215ENST00000611733 UNC13BO14795 1591 aa17.88■□□□□ 0.45
CLK4-215ENST00000611733 DEPDC5O75140 1603 aa17.87■□□□□ 0.45
CLK4-215ENST00000611733 RNF17Q9BXT8 1623 aaKnown RBP17.87■□□□□ 0.45
CLK4-215ENST00000611733 MPHOSPH9Q99550 1183 aa17.87■□□□□ 0.45
CLK4-215ENST00000611733 WASHC2CQ9Y4E1 1318 aa17.86■□□□□ 0.45
CLK4-215ENST00000611733 PZPP20742 1482 aa17.86■□□□□ 0.45
CLK4-215ENST00000611733 FOXD1Q16676 465 aa17.85■□□□□ 0.45
CLK4-215ENST00000611733 SLC4A1APQ9BWU0 796 aaKnown RBP17.85■□□□□ 0.45
CLK4-215ENST00000611733 PRDM15P57071 1507 aaPredicted RBP17.85■□□□□ 0.45
CLK4-215ENST00000611733 KANK1Q14678 1352 aa17.83■□□□□ 0.45
CLK4-215ENST00000611733 VWDEQ8N2E2 1590 aa17.83■□□□□ 0.45
CLK4-215ENST00000611733 FAM135AQ9P2D6 1515 aa17.83■□□□□ 0.44
CLK4-215ENST00000611733 DHX57Q6P158 1386 aaKnown RBP17.82■□□□□ 0.44
CLK4-215ENST00000611733 KDM5DQ9BY66 1539 aa17.82■□□□□ 0.44
CLK4-215ENST00000611733 PKD2Q13563 968 aa17.81■□□□□ 0.44
CLK4-215ENST00000611733 ABCC3O15438 1527 aa17.81■□□□□ 0.44
CLK4-215ENST00000611733 IQGAP3Q86VI3 1631 aa17.8■□□□□ 0.44
CLK4-215ENST00000611733 PPP6R1Q9UPN7 881 aa17.8■□□□□ 0.44
CLK4-215ENST00000611733 CEP152O94986 1710 aa17.79■□□□□ 0.44
CLK4-215ENST00000611733 ACIN1Q9UKV3 1341 aaKnown RBP17.79■□□□□ 0.44
CLK4-215ENST00000611733 ESF1Q9H501 851 aaKnown RBP17.79■□□□□ 0.44
CLK4-215ENST00000611733 CEBPAP49715 358 aaPredicted RBP17.77■□□□□ 0.44
CLK4-215ENST00000611733 CLTCQ00610 1675 aaKnown RBP17.77■□□□□ 0.43
CLK4-215ENST00000611733 PLPPR3Q6T4P5 718 aa17.77■□□□□ 0.43
CLK4-215ENST00000611733 LMTK2Q8IWU2 1503 aa17.77■□□□□ 0.43
CLK4-215ENST00000611733 FBXO31Q5XUX0 539 aaPredicted RBP17.76■□□□□ 0.43
CLK4-215ENST00000611733 ZMYM3Q14202 1370 aa17.76■□□□□ 0.43
CLK4-215ENST00000611733 KDM4FA0A1W2PPD8 638 aa17.76■□□□□ 0.43
CLK4-215ENST00000611733 ADAMTSL3P82987 1691 aa17.75■□□□□ 0.43
CLK4-215ENST00000611733 MADDQ8WXG6 1647 aa17.74■□□□□ 0.43
CLK4-215ENST00000611733 NPATQ14207 1427 aa17.74■□□□□ 0.43
CLK4-215ENST00000611733 CCER1Q8TC90 406 aaPredicted RBP17.73■□□□□ 0.43
CLK4-215ENST00000611733 TET3O43151 1660 aa17.73■□□□□ 0.43
CLK4-215ENST00000611733 CAMSAP1Q5T5Y3 1602 aa17.73■□□□□ 0.43
CLK4-215ENST00000611733 E9PCH4 1651 aa17.72■□□□□ 0.43
CLK4-215ENST00000611733 EFCAB6Q5THR3 1501 aa17.72■□□□□ 0.43
CLK4-215ENST00000611733 FER1L4A9Z1Z3 1794 aa17.71■□□□□ 0.43
CLK4-215ENST00000611733 ZC3H13Q5T200 1668 aaKnown RBP17.71■□□□□ 0.43
CLK4-215ENST00000611733 CNTLNQ9NXG0 1405 aa17.7■□□□□ 0.42
CLK4-215ENST00000611733 PLA2R1Q13018 1463 aa17.7■□□□□ 0.42
CLK4-215ENST00000611733 RIMS1Q86UR5 1692 aaKnown RBP17.7■□□□□ 0.42
CLK4-215ENST00000611733 ARHGAP31Q2M1Z3 1444 aa17.7■□□□□ 0.42
CLK4-215ENST00000611733 SIN3AQ96ST3 1273 aa17.69■□□□□ 0.42
CLK4-215ENST00000611733 CFAP65Q6ZU64 1925 aaKnown RBP17.69■□□□□ 0.42
CLK4-215ENST00000611733 ANKRD30BQ9BXX2 1392 aa17.68■□□□□ 0.42
CLK4-215ENST00000611733 PTPRTO14522 1441 aa17.65■□□□□ 0.42
CLK4-215ENST00000611733 RPRD2Q5VT52 1461 aaKnown RBP17.65■□□□□ 0.42
CLK4-215ENST00000611733 C3P01024 1663 aa17.65■□□□□ 0.42
CLK4-215ENST00000611733 NOS1P29475 1434 aa17.64■□□□□ 0.42
CLK4-215ENST00000611733 PTPRMP28827 1452 aa17.64■□□□□ 0.42
CLK4-215ENST00000611733 MROH2AA6NES4 1674 aa17.64■□□□□ 0.41
CLK4-215ENST00000611733 ERVK-7P63135 1459 aa17.63■□□□□ 0.41
CLK4-215ENST00000611733 NEUROD1Q13562 356 aa17.63■□□□□ 0.41
CLK4-215ENST00000611733 UGGT1Q9NYU2 1555 aa17.63■□□□□ 0.41
CLK4-215ENST00000611733 PREX1Q8TCU6 1659 aa17.61■□□□□ 0.41
CLK4-215ENST00000611733 SYNMO15061 1565 aa17.61■□□□□ 0.41
CLK4-215ENST00000611733 IDI1Q13907 227 aa17.61■□□□□ 0.41
CLK4-215ENST00000611733 SPATA31D1Q6ZQQ2 1576 aa17.6■□□□□ 0.41
CLK4-215ENST00000611733 SPHKAPQ2M3C7 1700 aa17.59■□□□□ 0.41
CLK4-215ENST00000611733 TNRQ92752 1358 aa17.58■□□□□ 0.41
CLK4-215ENST00000611733 TRPM2O94759 1503 aa17.58■□□□□ 0.4
CLK4-215ENST00000611733 CCDC144AA2RUR9 1427 aa17.57■□□□□ 0.4
CLK4-215ENST00000611733 CLTCL1P53675 1640 aa17.57■□□□□ 0.4
CLK4-215ENST00000611733 CLSPNQ9HAW4 1339 aa17.55■□□□□ 0.4
CLK4-215ENST00000611733 CHGAP10645 457 aaKnown RBP17.55■□□□□ 0.4
CLK4-215ENST00000611733 SLC52A1Q9NWF4 448 aa17.55■□□□□ 0.4
CLK4-215ENST00000611733 RGL3Q3MIN7 710 aa17.54■□□□□ 0.4
CLK4-215ENST00000611733 PIK3C2BO00750 1634 aa17.52■□□□□ 0.4
CLK4-215ENST00000611733 SPATA31E1Q6ZUB1 1445 aa17.49■□□□□ 0.39
CLK4-215ENST00000611733 STAG3Q9UJ98 1225 aa17.49■□□□□ 0.39
CLK4-215ENST00000611733 L3MBTL2Q969R5 705 aa17.47■□□□□ 0.39
CLK4-215ENST00000611733 NLRP1Q9C000 1473 aa17.47■□□□□ 0.39
CLK4-215ENST00000611733 ZNF326Q5BKZ1 582 aaKnown RBP17.46■□□□□ 0.39
CLK4-215ENST00000611733 MYO3AQ8NEV4 1616 aa17.46■□□□□ 0.39
CLK4-215ENST00000611733 NUTM2DQ5VT03 806 aaPredicted RBP17.46■□□□□ 0.39
CLK4-215ENST00000611733 TMEM131LA2VDJ0 1609 aa17.46■□□□□ 0.38
CLK4-215ENST00000611733 A2ML1A8K2U0 1454 aa17.45■□□□□ 0.38
CLK4-215ENST00000611733 KDM2AQ9Y2K7 1162 aa17.44■□□□□ 0.38
CLK4-215ENST00000611733 SETD1BQ9UPS6 1966 aaKnown RBP17.44■□□□□ 0.38
CLK4-215ENST00000611733 ADGRB3O60242 1522 aa17.44■□□□□ 0.38
CLK4-215ENST00000611733 DCAF11Q8TEB1 546 aa17.43■□□□□ 0.38
CLK4-215ENST00000611733 KIF1BO60333 1816 aa17.43■□□□□ 0.38
CLK4-215ENST00000611733 UHRF1BP1Q6BDS2 1440 aa17.43■□□□□ 0.38
CLK4-215ENST00000611733 TONSLQ96HA7 1378 aa17.43■□□□□ 0.38
CLK4-215ENST00000611733 MYO5BQ9ULV0 1848 aa17.43■□□□□ 0.38
CLK4-215ENST00000611733 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
CLK4-215ENST00000611733 CEP170BQ9Y4F5 1589 aaPredicted RBP17.42■□□□□ 0.38
CLK4-215ENST00000611733 UBR1Q8IWV7 1749 aa17.41■□□□□ 0.38
CLK4-215ENST00000611733 HSPA2P54652 639 aa17.4■□□□□ 0.38
CLK4-215ENST00000611733 THEMISQ8N1K5 641 aaPredicted RBP17.4■□□□□ 0.38
CLK4-215ENST00000611733 LTKP29376 864 aa17.39■□□□□ 0.37
CLK4-215ENST00000611733 TMEM2Q9UHN6 1383 aa17.38■□□□□ 0.37
CLK4-215ENST00000611733 ADGRF5Q8IZF2 1346 aa17.37■□□□□ 0.37
CLK4-215ENST00000611733 RIMS2Q9UQ26 1411 aa17.37■□□□□ 0.37
CLK4-215ENST00000611733 NEURL4Q96JN8 1562 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms