RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 ARID4BQ4LE39 1312 aaPredicted RBP17.64■□□□□ 0.41
VPS45-212ENST00000611412 DHX57Q6P158 1386 aaKnown RBP17.63■□□□□ 0.41
VPS45-212ENST00000611412 UNC13BO14795 1591 aa17.63■□□□□ 0.41
VPS45-212ENST00000611412 REREQ9P2R6 1566 aa17.62■□□□□ 0.41
VPS45-212ENST00000611412 CCER1Q8TC90 406 aaPredicted RBP17.62■□□□□ 0.41
VPS45-212ENST00000611412 MROH1Q8NDA8 1641 aa17.61■□□□□ 0.41
VPS45-212ENST00000611412 SLC4A1APQ9BWU0 796 aaKnown RBP17.61■□□□□ 0.41
VPS45-212ENST00000611412 PZPP20742 1482 aa17.61■□□□□ 0.41
VPS45-212ENST00000611412 MPHOSPH9Q99550 1183 aa17.6■□□□□ 0.41
VPS45-212ENST00000611412 DEPDC5O75140 1603 aa17.6■□□□□ 0.41
VPS45-212ENST00000611412 FOXD1Q16676 465 aa17.6■□□□□ 0.41
VPS45-212ENST00000611412 RNF17Q9BXT8 1623 aaKnown RBP17.59■□□□□ 0.41
VPS45-212ENST00000611412 BCORL1Q5H9F3 1711 aa17.59■□□□□ 0.41
VPS45-212ENST00000611412 AGLP35573 1532 aa17.58■□□□□ 0.41
VPS45-212ENST00000611412 FAM135AQ9P2D6 1515 aa17.58■□□□□ 0.4
VPS45-212ENST00000611412 PRDM15P57071 1507 aaPredicted RBP17.57■□□□□ 0.4
VPS45-212ENST00000611412 KDM5DQ9BY66 1539 aa17.57■□□□□ 0.4
VPS45-212ENST00000611412 KANK1Q14678 1352 aa17.57■□□□□ 0.4
VPS45-212ENST00000611412 IQGAP3Q86VI3 1631 aa17.56■□□□□ 0.4
VPS45-212ENST00000611412 PKD2Q13563 968 aa17.56■□□□□ 0.4
VPS45-212ENST00000611412 WASHC2CQ9Y4E1 1318 aa17.55■□□□□ 0.4
VPS45-212ENST00000611412 CEP152O94986 1710 aa17.54■□□□□ 0.4
VPS45-212ENST00000611412 ACIN1Q9UKV3 1341 aaKnown RBP17.54■□□□□ 0.4
VPS45-212ENST00000611412 VWDEQ8N2E2 1590 aa17.53■□□□□ 0.4
VPS45-212ENST00000611412 ABCC3O15438 1527 aa17.51■□□□□ 0.39
VPS45-212ENST00000611412 CLTCQ00610 1675 aaKnown RBP17.48■□□□□ 0.39
VPS45-212ENST00000611412 TET3O43151 1660 aa17.48■□□□□ 0.39
VPS45-212ENST00000611412 ESF1Q9H501 851 aaKnown RBP17.48■□□□□ 0.39
VPS45-212ENST00000611412 E9PCH4 1651 aa17.47■□□□□ 0.39
VPS45-212ENST00000611412 SIN3AQ96ST3 1273 aa17.47■□□□□ 0.39
VPS45-212ENST00000611412 LMTK2Q8IWU2 1503 aa17.47■□□□□ 0.39
VPS45-212ENST00000611412 CAMSAP1Q5T5Y3 1602 aa17.46■□□□□ 0.39
VPS45-212ENST00000611412 EFCAB6Q5THR3 1501 aa17.46■□□□□ 0.39
VPS45-212ENST00000611412 ZC3H13Q5T200 1668 aaKnown RBP17.45■□□□□ 0.38
VPS45-212ENST00000611412 NEUROD1Q13562 356 aa17.44■□□□□ 0.38
VPS45-212ENST00000611412 PLPPR3Q6T4P5 718 aa17.44■□□□□ 0.38
VPS45-212ENST00000611412 NPATQ14207 1427 aa17.43■□□□□ 0.38
VPS45-212ENST00000611412 PPP6R1Q9UPN7 881 aa17.43■□□□□ 0.38
VPS45-212ENST00000611412 CFAP65Q6ZU64 1925 aaKnown RBP17.43■□□□□ 0.38
VPS45-212ENST00000611412 ANKRD30BQ9BXX2 1392 aa17.42■□□□□ 0.38
VPS45-212ENST00000611412 FER1L4A9Z1Z3 1794 aa17.42■□□□□ 0.38
VPS45-212ENST00000611412 FBXO31Q5XUX0 539 aaPredicted RBP17.41■□□□□ 0.38
VPS45-212ENST00000611412 MADDQ8WXG6 1647 aa17.4■□□□□ 0.38
VPS45-212ENST00000611412 PLA2R1Q13018 1463 aa17.4■□□□□ 0.38
VPS45-212ENST00000611412 CEBPAP49715 358 aaPredicted RBP17.4■□□□□ 0.38
VPS45-212ENST00000611412 ZMYM3Q14202 1370 aa17.4■□□□□ 0.38
VPS45-212ENST00000611412 CLSPNQ9HAW4 1339 aa17.38■□□□□ 0.37
VPS45-212ENST00000611412 SPHKAPQ2M3C7 1700 aa17.37■□□□□ 0.37
VPS45-212ENST00000611412 ADAMTSL3P82987 1691 aa17.37■□□□□ 0.37
VPS45-212ENST00000611412 RIMS1Q86UR5 1692 aaKnown RBP17.37■□□□□ 0.37
VPS45-212ENST00000611412 ARHGAP31Q2M1Z3 1444 aa17.37■□□□□ 0.37
VPS45-212ENST00000611412 CNTLNQ9NXG0 1405 aa17.36■□□□□ 0.37
VPS45-212ENST00000611412 UGGT1Q9NYU2 1555 aa17.36■□□□□ 0.37
VPS45-212ENST00000611412 RPRD2Q5VT52 1461 aaKnown RBP17.36■□□□□ 0.37
VPS45-212ENST00000611412 PTPRTO14522 1441 aa17.35■□□□□ 0.37
VPS45-212ENST00000611412 PREX1Q8TCU6 1659 aa17.34■□□□□ 0.37
VPS45-212ENST00000611412 CCDC144AA2RUR9 1427 aa17.33■□□□□ 0.37
VPS45-212ENST00000611412 MROH2AA6NES4 1674 aa17.33■□□□□ 0.37
VPS45-212ENST00000611412 TRPM2O94759 1503 aa17.33■□□□□ 0.37
VPS45-212ENST00000611412 C3P01024 1663 aa17.33■□□□□ 0.36
VPS45-212ENST00000611412 ERVK-7P63135 1459 aa17.33■□□□□ 0.36
VPS45-212ENST00000611412 NOS1P29475 1434 aa17.32■□□□□ 0.36
VPS45-212ENST00000611412 SYNMO15061 1565 aa17.32■□□□□ 0.36
VPS45-212ENST00000611412 CLTCL1P53675 1640 aa17.32■□□□□ 0.36
VPS45-212ENST00000611412 CHGAP10645 457 aaKnown RBP17.29■□□□□ 0.36
VPS45-212ENST00000611412 SPATA31D1Q6ZQQ2 1576 aa17.28■□□□□ 0.36
VPS45-212ENST00000611412 KDM4FA0A1W2PPD8 638 aa17.28■□□□□ 0.36
VPS45-212ENST00000611412 RGL3Q3MIN7 710 aa17.28■□□□□ 0.36
VPS45-212ENST00000611412 IDI1Q13907 227 aa17.27■□□□□ 0.36
VPS45-212ENST00000611412 TONSLQ96HA7 1378 aa17.27■□□□□ 0.36
VPS45-212ENST00000611412 TNRQ92752 1358 aa17.26■□□□□ 0.35
VPS45-212ENST00000611412 PTPRMP28827 1452 aa17.26■□□□□ 0.35
VPS45-212ENST00000611412 AEBP2Q6ZN18 517 aaPredicted RBP17.24■□□□□ 0.35
VPS45-212ENST00000611412 L3MBTL2Q969R5 705 aa17.24■□□□□ 0.35
VPS45-212ENST00000611412 PIK3C2BO00750 1634 aa17.24■□□□□ 0.35
VPS45-212ENST00000611412 SLC52A1Q9NWF4 448 aa17.23■□□□□ 0.35
VPS45-212ENST00000611412 ZEB1P37275 1124 aaPredicted RBP17.22■□□□□ 0.35
VPS45-212ENST00000611412 KIF1BO60333 1816 aa17.21■□□□□ 0.35
VPS45-212ENST00000611412 SPATA31E1Q6ZUB1 1445 aa17.21■□□□□ 0.35
VPS45-212ENST00000611412 ZNF326Q5BKZ1 582 aaKnown RBP17.2■□□□□ 0.34
VPS45-212ENST00000611412 STAG3Q9UJ98 1225 aa17.2■□□□□ 0.34
VPS45-212ENST00000611412 KDM2AQ9Y2K7 1162 aa17.2■□□□□ 0.34
VPS45-212ENST00000611412 DCAF11Q8TEB1 546 aa17.19■□□□□ 0.34
VPS45-212ENST00000611412 ADGRB3O60242 1522 aa17.18■□□□□ 0.34
VPS45-212ENST00000611412 MYO5BQ9ULV0 1848 aa17.18■□□□□ 0.34
VPS45-212ENST00000611412 NUTM2DQ5VT03 806 aaPredicted RBP17.17■□□□□ 0.34
VPS45-212ENST00000611412 TMEM131LA2VDJ0 1609 aa17.16■□□□□ 0.34
VPS45-212ENST00000611412 MYO3AQ8NEV4 1616 aa17.16■□□□□ 0.34
VPS45-212ENST00000611412 TIMELESSQ9UNS1 1208 aa17.16■□□□□ 0.34
VPS45-212ENST00000611412 SENP3Q9H4L4 574 aaPredicted RBP17.15■□□□□ 0.34
VPS45-212ENST00000611412 PPP1R15AO75807 674 aaPredicted RBP17.14■□□□□ 0.33
VPS45-212ENST00000611412 NLRP1Q9C000 1473 aa17.14■□□□□ 0.33
VPS45-212ENST00000611412 A2ML1A8K2U0 1454 aa17.13■□□□□ 0.33
VPS45-212ENST00000611412 UBR1Q8IWV7 1749 aa17.12■□□□□ 0.33
VPS45-212ENST00000611412 NBPF8Q3BBV2 869 aa17.11■□□□□ 0.33
VPS45-212ENST00000611412 NEURL4Q96JN8 1562 aa17.11■□□□□ 0.33
VPS45-212ENST00000611412 CEP170BQ9Y4F5 1589 aaPredicted RBP17.1■□□□□ 0.33
VPS45-212ENST00000611412 NEXMIFQ5QGS0 1516 aa17.09■□□□□ 0.33
VPS45-212ENST00000611412 ADGRF5Q8IZF2 1346 aa17.08■□□□□ 0.33
VPS45-212ENST00000611412 UHRF1BP1Q6BDS2 1440 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms