RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 UNC13BO14795 1591 aa32.62■■■□□ 2.81
UBE3C-209ENST00000611269 ACIN1Q9UKV3 1341 aaKnown RBP32.61■■■□□ 2.81
UBE3C-209ENST00000611269 BCORL1Q5H9F3 1711 aa32.59■■■□□ 2.81
UBE3C-209ENST00000611269 SIGLEC1Q9BZZ2 1709 aa32.58■■■□□ 2.81
UBE3C-209ENST00000611269 DEPDC5O75140 1603 aa32.58■■■□□ 2.81
UBE3C-209ENST00000611269 NUP155O75694 1391 aa32.57■■■□□ 2.8
UBE3C-209ENST00000611269 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.57■■■□□ 2.81e-6■■■□□ 14.8
UBE3C-209ENST00000611269 RNF17Q9BXT8 1623 aaKnown RBP32.55■■■□□ 2.8
UBE3C-209ENST00000611269 KDM5DQ9BY66 1539 aa32.54■■■□□ 2.8
UBE3C-209ENST00000611269 MROH1Q8NDA8 1641 aa32.53■■■□□ 2.8
UBE3C-209ENST00000611269 AGLP35573 1532 aa32.53■■■□□ 2.8
UBE3C-209ENST00000611269 PZPP20742 1482 aa32.52■■■□□ 2.8
UBE3C-209ENST00000611269 PRDM15P57071 1507 aaPredicted RBP32.51■■■□□ 2.79
UBE3C-209ENST00000611269 IQGAP3Q86VI3 1631 aa32.49■■■□□ 2.79
UBE3C-209ENST00000611269 GGT6Q6P531 493 aa32.48■■■□□ 2.79
UBE3C-209ENST00000611269 MPHOSPH9Q99550 1183 aa32.48■■■□□ 2.79
UBE3C-209ENST00000611269 FAM135AQ9P2D6 1515 aa32.48■■■□□ 2.79
UBE3C-209ENST00000611269 SLC4A1APQ9BWU0 796 aaKnown RBP32.47■■■□□ 2.79
UBE3C-209ENST00000611269 VWDEQ8N2E2 1590 aa32.44■■■□□ 2.78
UBE3C-209ENST00000611269 KANK1Q14678 1352 aa32.44■■■□□ 2.78
UBE3C-209ENST00000611269 ARID4BQ4LE39 1312 aaPredicted RBP32.41■■■□□ 2.78
UBE3C-209ENST00000611269 CEP152O94986 1710 aa32.38■■■□□ 2.77
UBE3C-209ENST00000611269 MLECQ14165 292 aa32.36■■■□□ 2.77
UBE3C-209ENST00000611269 PKD2Q13563 968 aa32.35■■■□□ 2.77
UBE3C-209ENST00000611269 FOXD1Q16676 465 aa32.35■■■□□ 2.77
UBE3C-209ENST00000611269 TET3O43151 1660 aa32.34■■■□□ 2.77
UBE3C-209ENST00000611269 ABCC3O15438 1527 aa32.33■■■□□ 2.77
UBE3C-209ENST00000611269 WASHC2CQ9Y4E1 1318 aa32.33■■■□□ 2.77
UBE3C-209ENST00000611269 LMTK2Q8IWU2 1503 aa32.31■■■□□ 2.76
UBE3C-209ENST00000611269 ZC3H13Q5T200 1668 aaKnown RBP32.3■■■□□ 2.76
UBE3C-209ENST00000611269 E9PCH4 1651 aa32.28■■■□□ 2.76
UBE3C-209ENST00000611269 PPP6R1Q9UPN7 881 aa32.27■■■□□ 2.76
UBE3C-209ENST00000611269 EFCAB6Q5THR3 1501 aa32.26■■■□□ 2.76
UBE3C-209ENST00000611269 CAMSAP1Q5T5Y3 1602 aa32.25■■■□□ 2.75
UBE3C-209ENST00000611269 CLTCQ00610 1675 aaKnown RBP32.24■■■□□ 2.75
UBE3C-209ENST00000611269 ZNF316A6NFI3 1004 aaPredicted RBP32.23■■■□□ 2.75
UBE3C-209ENST00000611269 ANKRD30BQ9BXX2 1392 aa32.21■■■□□ 2.75
UBE3C-209ENST00000611269 NPATQ14207 1427 aa32.17■■■□□ 2.74
UBE3C-209ENST00000611269 ESF1Q9H501 851 aaKnown RBP32.16■■■□□ 2.74
UBE3C-209ENST00000611269 SIN3AQ96ST3 1273 aa32.15■■■□□ 2.74
UBE3C-209ENST00000611269 RPRD2Q5VT52 1461 aaKnown RBP32.15■■■□□ 2.74
UBE3C-209ENST00000611269 FER1L4A9Z1Z3 1794 aa32.14■■■□□ 2.74
UBE3C-209ENST00000611269 CFAP65Q6ZU64 1925 aaKnown RBP32.14■■■□□ 2.74
UBE3C-209ENST00000611269 ARHGAP31Q2M1Z3 1444 aa32.13■■■□□ 2.73
UBE3C-209ENST00000611269 SPHKAPQ2M3C7 1700 aa32.13■■■□□ 2.73
UBE3C-209ENST00000611269 PLA2R1Q13018 1463 aa32.12■■■□□ 2.73
UBE3C-209ENST00000611269 CNTLNQ9NXG0 1405 aa32.1■■■□□ 2.73
UBE3C-209ENST00000611269 NEUROD1Q13562 356 aa32.09■■■□□ 2.73
UBE3C-209ENST00000611269 PTPRTO14522 1441 aa32.08■■■□□ 2.73
UBE3C-209ENST00000611269 MROH2AA6NES4 1674 aa32.07■■■□□ 2.72
UBE3C-209ENST00000611269 ZMYM3Q14202 1370 aa32.06■■■□□ 2.72
UBE3C-209ENST00000611269 ADAMTSL3P82987 1691 aa32.06■■■□□ 2.72
UBE3C-209ENST00000611269 MADDQ8WXG6 1647 aa32.06■■■□□ 2.72
UBE3C-209ENST00000611269 TRPM2O94759 1503 aa32.06■■■□□ 2.72
UBE3C-209ENST00000611269 DIEXFQ68CQ4 756 aaKnown RBP32.04■■■□□ 2.72
UBE3C-209ENST00000611269 PREX1Q8TCU6 1659 aa32.04■■■□□ 2.72
UBE3C-209ENST00000611269 CCDC144AA2RUR9 1427 aa32.02■■■□□ 2.72
UBE3C-209ENST00000611269 TIMELESSQ9UNS1 1208 aa32.01■■■□□ 2.72
UBE3C-209ENST00000611269 NOS1P29475 1434 aa32.01■■■□□ 2.71
UBE3C-209ENST00000611269 FBXO31Q5XUX0 539 aaPredicted RBP32■■■□□ 2.71
UBE3C-209ENST00000611269 RIMS1Q86UR5 1692 aaKnown RBP31.99■■■□□ 2.71
UBE3C-209ENST00000611269 ERVK-7P63135 1459 aa31.98■■■□□ 2.71
UBE3C-209ENST00000611269 C3P01024 1663 aa31.97■■■□□ 2.71
UBE3C-209ENST00000611269 SYNMO15061 1565 aa31.97■■■□□ 2.71
UBE3C-209ENST00000611269 UGGT1Q9NYU2 1555 aa31.97■■■□□ 2.71
UBE3C-209ENST00000611269 CLTCL1P53675 1640 aa31.97■■■□□ 2.71
UBE3C-209ENST00000611269 SPATA31D1Q6ZQQ2 1576 aa31.94■■■□□ 2.7
UBE3C-209ENST00000611269 CEBPAP49715 358 aaPredicted RBP31.93■■■□□ 2.7
UBE3C-209ENST00000611269 PIK3C2BO00750 1634 aa31.89■■■□□ 2.7
UBE3C-209ENST00000611269 TONSLQ96HA7 1378 aa31.89■■■□□ 2.7
UBE3C-209ENST00000611269 PLPPR3Q6T4P5 718 aa31.89■■■□□ 2.69
UBE3C-209ENST00000611269 KIF1BO60333 1816 aa31.85■■■□□ 2.69
UBE3C-209ENST00000611269 SLC52A1Q9NWF4 448 aa31.83■■■□□ 2.69
UBE3C-209ENST00000611269 TNRQ92752 1358 aa31.82■■■□□ 2.68
UBE3C-209ENST00000611269 IDI1Q13907 227 aa31.82■■■□□ 2.68
UBE3C-209ENST00000611269 SPATA31E1Q6ZUB1 1445 aa31.81■■■□□ 2.68
UBE3C-209ENST00000611269 L3MBTL2Q969R5 705 aa31.79■■■□□ 2.68
UBE3C-209ENST00000611269 RGL3Q3MIN7 710 aa31.78■■■□□ 2.68
UBE3C-209ENST00000611269 PTPRMP28827 1452 aa31.78■■■□□ 2.68
UBE3C-209ENST00000611269 ADGRB3O60242 1522 aa31.76■■■□□ 2.67
UBE3C-209ENST00000611269 CHGAP10645 457 aaKnown RBP31.76■■■□□ 2.67
UBE3C-209ENST00000611269 NEURL4Q96JN8 1562 aa31.75■■■□□ 2.67
UBE3C-209ENST00000611269 KDM4FA0A1W2PPD8 638 aa31.74■■■□□ 2.67
UBE3C-209ENST00000611269 PPP1R15AO75807 674 aaPredicted RBP31.72■■■□□ 2.67
UBE3C-209ENST00000611269 TMEM131LA2VDJ0 1609 aa31.71■■■□□ 2.67
UBE3C-209ENST00000611269 MYO5BQ9ULV0 1848 aa31.71■■■□□ 2.67
UBE3C-209ENST00000611269 NLRP1Q9C000 1473 aa31.68■■■□□ 2.66
UBE3C-209ENST00000611269 DCAF11Q8TEB1 546 aa31.67■■■□□ 2.66
UBE3C-209ENST00000611269 MYO3AQ8NEV4 1616 aa31.67■■■□□ 2.66
UBE3C-209ENST00000611269 ZNF326Q5BKZ1 582 aaKnown RBP31.66■■■□□ 2.66
UBE3C-209ENST00000611269 STAG3Q9UJ98 1225 aa31.65■■■□□ 2.66
UBE3C-209ENST00000611269 KDM2AQ9Y2K7 1162 aa31.63■■■□□ 2.65
UBE3C-209ENST00000611269 SETD1BQ9UPS6 1966 aaKnown RBP31.63■■■□□ 2.65
UBE3C-209ENST00000611269 A2ML1A8K2U0 1454 aa31.62■■■□□ 2.65
UBE3C-209ENST00000611269 UBR1Q8IWV7 1749 aa31.62■■■□□ 2.65
UBE3C-209ENST00000611269 IFT172Q9UG01 1749 aa31.61■■■□□ 2.65
UBE3C-209ENST00000611269 KDM5AP29375 1690 aaKnown RBP31.61■■■□□ 2.65
UBE3C-209ENST00000611269 PPLO60437 1756 aa31.59■■■□□ 2.65
UBE3C-209ENST00000611269 NEXMIFQ5QGS0 1516 aa31.56■■■□□ 2.64
UBE3C-209ENST00000611269 RPGRIP1LQ68CZ1 1315 aa31.56■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms