RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 SETD1BQ9UPS6 1966 aaKnown RBP21.85■■□□□ 1.09
HDDC2-209ENST00000609477 RNF17Q9BXT8 1623 aaKnown RBP21.84■■□□□ 1.09
HDDC2-209ENST00000609477 RRBP1Q9P2E9 1410 aaKnown RBP21.84■■□□□ 1.09
HDDC2-209ENST00000609477 RRP7BPQ9NSQ0 103 aa21.84■■□□□ 1.09
HDDC2-209ENST00000609477 CLTCQ00610 1675 aaKnown RBP21.82■■□□□ 1.08
HDDC2-209ENST00000609477 CHIC2Q9UKJ5 165 aa21.82■■□□□ 1.08
HDDC2-209ENST00000609477 KDM5DQ9BY66 1539 aa21.81■■□□□ 1.08
HDDC2-209ENST00000609477 CEBPAP49715 358 aaPredicted RBP21.81■■□□□ 1.08
HDDC2-209ENST00000609477 NPATQ14207 1427 aa21.8■■□□□ 1.08
HDDC2-209ENST00000609477 ROCK1Q13464 1354 aa21.8■■□□□ 1.08
HDDC2-209ENST00000609477 WASHC2CQ9Y4E1 1318 aa21.8■■□□□ 1.08
HDDC2-209ENST00000609477 PLPPR3Q6T4P5 718 aa21.79■■□□□ 1.08
HDDC2-209ENST00000609477 ZC3H13Q5T200 1668 aaKnown RBP21.78■■□□□ 1.08
HDDC2-209ENST00000609477 PREX1Q8TCU6 1659 aa21.78■■□□□ 1.08
HDDC2-209ENST00000609477 LMTK3Q96Q04 1460 aa21.77■■□□□ 1.08
HDDC2-209ENST00000609477 PTPRKQ15262 1439 aa21.76■■□□□ 1.07
HDDC2-209ENST00000609477 DEPDC5O75140 1603 aa21.74■■□□□ 1.07
HDDC2-209ENST00000609477 PRDM15P57071 1507 aaPredicted RBP21.74■■□□□ 1.07
HDDC2-209ENST00000609477 MROH1Q8NDA8 1641 aa21.73■■□□□ 1.07
HDDC2-209ENST00000609477 UHRF1BP1Q6BDS2 1440 aa21.73■■□□□ 1.07
HDDC2-209ENST00000609477 ANKRD50Q9ULJ7 1429 aa21.73■■□□□ 1.07
HDDC2-209ENST00000609477 KANK1Q14678 1352 aa21.72■■□□□ 1.07
HDDC2-209ENST00000609477 PZPP20742 1482 aa21.71■■□□□ 1.07
HDDC2-209ENST00000609477 ABCC3O15438 1527 aa21.71■■□□□ 1.07
HDDC2-209ENST00000609477 ITGAEP38570 1179 aa21.67■■□□□ 1.06
HDDC2-209ENST00000609477 ARHGAP31Q2M1Z3 1444 aa21.65■■□□□ 1.06
HDDC2-209ENST00000609477 VWDEQ8N2E2 1590 aa21.65■■□□□ 1.06
HDDC2-209ENST00000609477 LMTK2Q8IWU2 1503 aa21.65■■□□□ 1.06
HDDC2-209ENST00000609477 CAMSAP1Q5T5Y3 1602 aa21.64■■□□□ 1.05
HDDC2-209ENST00000609477 CEP152O94986 1710 aa21.63■■□□□ 1.05
HDDC2-209ENST00000609477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.63■■□□□ 1.052e-7■■■■□ 19.8
HDDC2-209ENST00000609477 ZNF142P52746 1687 aaPredicted RBP21.61■■□□□ 1.05
HDDC2-209ENST00000609477 MYO3AQ8NEV4 1616 aa21.61■■□□□ 1.05
HDDC2-209ENST00000609477 TNRQ92752 1358 aa21.61■■□□□ 1.05
HDDC2-209ENST00000609477 HSPA2P54652 639 aa21.6■■□□□ 1.05
HDDC2-209ENST00000609477 FBXO31Q5XUX0 539 aaPredicted RBP21.6■■□□□ 1.05
HDDC2-209ENST00000609477 UNC13BO14795 1591 aa21.6■■□□□ 1.05
HDDC2-209ENST00000609477 SPATA31D1Q6ZQQ2 1576 aa21.6■■□□□ 1.05
HDDC2-209ENST00000609477 NLRP1Q9C000 1473 aa21.58■■□□□ 1.05
HDDC2-209ENST00000609477 CEP170BQ9Y4F5 1589 aaPredicted RBP21.57■■□□□ 1.04
HDDC2-209ENST00000609477 A2ML1A8K2U0 1454 aa21.57■■□□□ 1.04
HDDC2-209ENST00000609477 ERVK-7P63135 1459 aa21.56■■□□□ 1.04
HDDC2-209ENST00000609477 HFM1A2PYH4 1435 aa21.55■■□□□ 1.04
HDDC2-209ENST00000609477 DMRT2Q9Y5R5 561 aa21.55■■□□□ 1.04
HDDC2-209ENST00000609477 RPRD2Q5VT52 1461 aaKnown RBP21.55■■□□□ 1.04
HDDC2-209ENST00000609477 NAIPQ13075 1403 aa21.55■■□□□ 1.04
HDDC2-209ENST00000609477 GCC2Q8IWJ2 1684 aa21.54■■□□□ 1.04
HDDC2-209ENST00000609477 EFCAB6Q5THR3 1501 aa21.54■■□□□ 1.04
HDDC2-209ENST00000609477 TET3O43151 1660 aa21.53■■□□□ 1.04
HDDC2-209ENST00000609477 PLA2R1Q13018 1463 aa21.52■■□□□ 1.04
HDDC2-209ENST00000609477 IQGAP3Q86VI3 1631 aa21.51■■□□□ 1.03
HDDC2-209ENST00000609477 NUP155O75694 1391 aa21.49■■□□□ 1.03
HDDC2-209ENST00000609477 STRCQ7RTU9 1775 aa21.49■■□□□ 1.03
HDDC2-209ENST00000609477 THEMISQ8N1K5 641 aaPredicted RBP21.49■■□□□ 1.03
HDDC2-209ENST00000609477 ACIN1Q9UKV3 1341 aaKnown RBP21.49■■□□□ 1.03
HDDC2-209ENST00000609477 CFAP65Q6ZU64 1925 aaKnown RBP21.49■■□□□ 1.03
HDDC2-209ENST00000609477 PKD2Q13563 968 aa21.47■■□□□ 1.03
HDDC2-209ENST00000609477 UGGT1Q9NYU2 1555 aa21.47■■□□□ 1.03
HDDC2-209ENST00000609477 NOS1P29475 1434 aa21.46■■□□□ 1.03
HDDC2-209ENST00000609477 SLC52A1Q9NWF4 448 aa21.45■■□□□ 1.02
HDDC2-209ENST00000609477 PTPRTO14522 1441 aa21.45■■□□□ 1.02
HDDC2-209ENST00000609477 KDM5AP29375 1690 aaKnown RBP21.43■■□□□ 1.02
HDDC2-209ENST00000609477 E9PCH4 1651 aa21.4■■□□□ 1.02
HDDC2-209ENST00000609477 UBR1Q8IWV7 1749 aa21.39■■□□□ 1.01
HDDC2-209ENST00000609477 ANKLE2Q86XL3 938 aa21.39■■□□□ 1.01
HDDC2-209ENST00000609477 SYNMO15061 1565 aa21.39■■□□□ 1.01
HDDC2-209ENST00000609477 IDI1Q13907 227 aa21.38■■□□□ 1.01
HDDC2-209ENST00000609477 PIK3C2BO00750 1634 aa21.36■■□□□ 1.01
HDDC2-209ENST00000609477 POLR1AO95602 1720 aaPredicted RBP21.35■■□□□ 1.01
HDDC2-209ENST00000609477 NCKAP5LQ9HCH0 1330 aa21.35■■□□□ 1.01
HDDC2-209ENST00000609477 TRIM52Q96A61 297 aa21.34■■□□□ 1.01
HDDC2-209ENST00000609477 STAG3Q9UJ98 1225 aa21.34■■□□□ 1.01
HDDC2-209ENST00000609477 SETD5Q9C0A6 1442 aa21.34■■□□□ 1.01
HDDC2-209ENST00000609477 SLIT1O75093 1534 aa21.34■■□□□ 1.01
HDDC2-209ENST00000609477 MED14O60244 1454 aa21.32■■□□□ 1
HDDC2-209ENST00000609477 ARHGAP23Q9P227 1491 aa21.32■■□□□ 1
HDDC2-209ENST00000609477 ADGRB3O60242 1522 aa21.3■■□□□ 1
HDDC2-209ENST00000609477 NEURL4Q96JN8 1562 aa21.29■■□□□ 1
HDDC2-209ENST00000609477 TMEM2Q9UHN6 1383 aa21.29■■□□□ 1
HDDC2-209ENST00000609477 SLC4A1APQ9BWU0 796 aaKnown RBP21.29■■□□□ 1
HDDC2-209ENST00000609477 EID1Q9Y6B2 187 aa21.29■■□□□ 1
HDDC2-209ENST00000609477 SPHKAPQ2M3C7 1700 aa21.29■■□□□ 1
HDDC2-209ENST00000609477 HRCP23327 699 aa21.28■■□□□ 1
HDDC2-209ENST00000609477 SCAF11Q99590 1463 aaKnown RBP21.27■■□□□ 1
HDDC2-209ENST00000609477 HDGFP51858 240 aaKnown RBP21.27■■□□□ 1
HDDC2-209ENST00000609477 NPHP4O75161 1426 aaPredicted RBP21.26■□□□□ 0.99
HDDC2-209ENST00000609477 TMEM131LA2VDJ0 1609 aa21.26■□□□□ 0.99
HDDC2-209ENST00000609477 TXNDC2Q86VQ3 553 aa21.25■□□□□ 0.99
HDDC2-209ENST00000609477 IQGAP1P46940 1657 aa21.24■□□□□ 0.99
HDDC2-209ENST00000609477 TRPM2O94759 1503 aa21.24■□□□□ 0.99
HDDC2-209ENST00000609477 RAB3GAP2Q9H2M9 1393 aa21.23■□□□□ 0.99
HDDC2-209ENST00000609477 LTKP29376 864 aa21.22■□□□□ 0.99
HDDC2-209ENST00000609477 MPHOSPH9Q99550 1183 aa21.22■□□□□ 0.99
HDDC2-209ENST00000609477 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.2■□□□□ 0.98
HDDC2-209ENST00000609477 CERKQ8TCT0 537 aa21.19■□□□□ 0.98
HDDC2-209ENST00000609477 LTBP4Q8N2S1 1624 aa21.18■□□□□ 0.98
HDDC2-209ENST00000609477 MYO5BQ9ULV0 1848 aa21.18■□□□□ 0.98
HDDC2-209ENST00000609477 ZFYVE9O95405 1425 aa21.18■□□□□ 0.98
HDDC2-209ENST00000609477 CHGAP10645 457 aaKnown RBP21.17■□□□□ 0.98
HDDC2-209ENST00000609477 RIMS2Q9UQ26 1411 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms