RNA–Protein interactions for RNA: ENST00000608788.5

LINC01278-203, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 5 BASIC

Gene LINC01278, Length 820 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-203ENST00000608788 MBD5Q9P267 1494 aa23.27■■□□□ 1.32
LINC01278-203ENST00000608788 MED1Q15648 1581 aaPredicted RBP23.27■■□□□ 1.32
LINC01278-203ENST00000608788 CCNB3Q8WWL7 1395 aa23.26■■□□□ 1.31
LINC01278-203ENST00000608788 CPS1P31327 1500 aa23.25■■□□□ 1.31
LINC01278-203ENST00000608788 HSPA1LP34931 641 aa23.24■■□□□ 1.31
LINC01278-203ENST00000608788 POLR1AO95602 1720 aaPredicted RBP23.24■■□□□ 1.31
LINC01278-203ENST00000608788 RTEL1-TNFRSF6BF6WH68 1400 aa23.23■■□□□ 1.31
LINC01278-203ENST00000608788 SHANK2Q9UPX8 1470 aa23.22■■□□□ 1.31
LINC01278-203ENST00000608788 ZNF644Q9H582 1327 aaPredicted RBP23.21■■□□□ 1.31
LINC01278-203ENST00000608788 TIAM1Q13009 1591 aa23.21■■□□□ 1.31
LINC01278-203ENST00000608788 DHX29Q7Z478 1369 aaKnown RBP23.2■■□□□ 1.3
LINC01278-203ENST00000608788 ALKQ9UM73 1620 aa23.19■■□□□ 1.3
LINC01278-203ENST00000608788 VWDEQ8N2E2 1590 aa23.18■■□□□ 1.3
LINC01278-203ENST00000608788 FAM135AQ9P2D6 1515 aa23.18■■□□□ 1.3
LINC01278-203ENST00000608788 PZPP20742 1482 aa23.18■■□□□ 1.3
LINC01278-203ENST00000608788 TNRQ92752 1358 aa23.18■■□□□ 1.3
LINC01278-203ENST00000608788 FBXO31Q5XUX0 539 aaPredicted RBP23.17■■□□□ 1.3
LINC01278-203ENST00000608788 MTUS2Q5JR59 1369 aa23.16■■□□□ 1.3
LINC01278-203ENST00000608788 TOM1O60784 492 aa23.16■■□□□ 1.3
LINC01278-203ENST00000608788 KDM5DQ9BY66 1539 aa23.15■■□□□ 1.3
LINC01278-203ENST00000608788 PIP4K2BP78356 416 aa23.15■■□□□ 1.3
LINC01278-203ENST00000608788 PPP4R3CPQ6ZMV5 832 aa23.15■■□□□ 1.3
LINC01278-203ENST00000608788 MED14O60244 1454 aa23.14■■□□□ 1.29
LINC01278-203ENST00000608788 DEPDC5O75140 1603 aa23.11■■□□□ 1.29
LINC01278-203ENST00000608788 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.11■■□□□ 1.29
LINC01278-203ENST00000608788 NLRP1Q9C000 1473 aa23.11■■□□□ 1.29
LINC01278-203ENST00000608788 CEP162Q5TB80 1403 aa23.1■■□□□ 1.29
LINC01278-203ENST00000608788 EHBP1L1Q8N3D4 1523 aa23.1■■□□□ 1.29
LINC01278-203ENST00000608788 MIA2Q96PC5 1412 aa23.09■■□□□ 1.29
LINC01278-203ENST00000608788 KIF3BO15066 747 aa23.09■■□□□ 1.29
LINC01278-203ENST00000608788 ANKLE2Q86XL3 938 aa23.09■■□□□ 1.29
LINC01278-203ENST00000608788 NPHP4O75161 1426 aaPredicted RBP23.08■■□□□ 1.28
LINC01278-203ENST00000608788 UGGT1Q9NYU2 1555 aa23.07■■□□□ 1.28
LINC01278-203ENST00000608788 CCDC141Q6ZP82 1450 aa23.07■■□□□ 1.28
LINC01278-203ENST00000608788 THEMISQ8N1K5 641 aaPredicted RBP23.06■■□□□ 1.28
LINC01278-203ENST00000608788 WASHC2CQ9Y4E1 1318 aa23.04■■□□□ 1.28
LINC01278-203ENST00000608788 STRCP1A6NGW2 1772 aa23.04■■□□□ 1.28
LINC01278-203ENST00000608788 IQGAP1P46940 1657 aa23.03■■□□□ 1.28
LINC01278-203ENST00000608788 CAMSAP2Q08AD1 1489 aa23.02■■□□□ 1.28
LINC01278-203ENST00000608788 LRRC7Q96NW7 1537 aa23.02■■□□□ 1.28
LINC01278-203ENST00000608788 RSPH4AQ5TD94 716 aa22.99■■□□□ 1.27
LINC01278-203ENST00000608788 SYNMO15061 1565 aa22.97■■□□□ 1.27
LINC01278-203ENST00000608788 ARHGEF5Q12774 1597 aa22.97■■□□□ 1.27
LINC01278-203ENST00000608788 RNF17Q9BXT8 1623 aaKnown RBP22.97■■□□□ 1.27
LINC01278-203ENST00000608788 NCOA2Q15596 1464 aa22.97■■□□□ 1.27
LINC01278-203ENST00000608788 ABCC3O15438 1527 aa22.96■■□□□ 1.27
LINC01278-203ENST00000608788 ZC3H13Q5T200 1668 aaKnown RBP22.95■■□□□ 1.26
LINC01278-203ENST00000608788 ERVK-7P63135 1459 aa22.92■■□□□ 1.26
LINC01278-203ENST00000608788 MROH1Q8NDA8 1641 aa22.9■■□□□ 1.26
LINC01278-203ENST00000608788 RGS17Q9UGC6 210 aaPredicted RBP22.89■■□□□ 1.25
LINC01278-203ENST00000608788 MAST1Q9Y2H9 1570 aa22.89■■□□□ 1.25
LINC01278-203ENST00000608788 UBR1Q8IWV7 1749 aa22.88■■□□□ 1.25
LINC01278-203ENST00000608788 EIF2AK4Q9P2K8 1649 aaKnown RBP22.87■■□□□ 1.25
LINC01278-203ENST00000608788 ARHGAP23Q9P227 1491 aa22.86■■□□□ 1.25
LINC01278-203ENST00000608788 SCAF11Q99590 1463 aaKnown RBP22.85■■□□□ 1.25
LINC01278-203ENST00000608788 TSPY4P0CV99 314 aa22.85■■□□□ 1.25
LINC01278-203ENST00000608788 TSPY10P0CW01 314 aa22.85■■□□□ 1.25
LINC01278-203ENST00000608788 XIRP1Q702N8 1843 aaKnown RBP22.85■■□□□ 1.25
LINC01278-203ENST00000608788 SLIT1O75093 1534 aa22.84■■□□□ 1.25
LINC01278-203ENST00000608788 LTKP29376 864 aa22.81■■□□□ 1.24
LINC01278-203ENST00000608788 CEP152O94986 1710 aa22.79■■□□□ 1.24
LINC01278-203ENST00000608788 ARHGAP31Q2M1Z3 1444 aa22.77■■□□□ 1.24
LINC01278-203ENST00000608788 FAM135BQ49AJ0 1406 aa22.76■■□□□ 1.23
LINC01278-203ENST00000608788 CFAP65Q6ZU64 1925 aaKnown RBP22.75■■□□□ 1.23
LINC01278-203ENST00000608788 LRRC9Q6ZRR7 1453 aa22.74■■□□□ 1.23
LINC01278-203ENST00000608788 PRDM15P57071 1507 aaPredicted RBP22.74■■□□□ 1.23
LINC01278-203ENST00000608788 TXNDC2Q86VQ3 553 aa22.74■■□□□ 1.23
LINC01278-203ENST00000608788 DUOX2Q9NRD8 1548 aa22.73■■□□□ 1.23
LINC01278-203ENST00000608788 TMEM2Q9UHN6 1383 aa22.7■■□□□ 1.22
LINC01278-203ENST00000608788 PIK3C2BO00750 1634 aa22.69■■□□□ 1.22
LINC01278-203ENST00000608788 POTEAQ6S8J7 498 aa22.69■■□□□ 1.22
LINC01278-203ENST00000608788 MAP3K1Q13233 1512 aa22.68■■□□□ 1.22
LINC01278-203ENST00000608788 TMEM94Q12767 1356 aa22.67■■□□□ 1.22
LINC01278-203ENST00000608788 KDM5AP29375 1690 aaKnown RBP22.67■■□□□ 1.22
LINC01278-203ENST00000608788 MYOM3Q5VTT5 1437 aa22.66■■□□□ 1.22
LINC01278-203ENST00000608788 CNKSR2Q8WXI2 1034 aa22.66■■□□□ 1.22
LINC01278-203ENST00000608788 EID1Q9Y6B2 187 aa22.66■■□□□ 1.22
LINC01278-203ENST00000608788 ERBINQ96RT1 1412 aa22.65■■□□□ 1.22
LINC01278-203ENST00000608788 TET3O43151 1660 aa22.65■■□□□ 1.22
LINC01278-203ENST00000608788 ROBO1Q9Y6N7 1651 aa22.65■■□□□ 1.22
LINC01278-203ENST00000608788 KIF15Q9NS87 1388 aa22.63■■□□□ 1.21
LINC01278-203ENST00000608788 KCNA6P17658 529 aa22.62■■□□□ 1.21
LINC01278-203ENST00000608788 VPS8Q8N3P4 1428 aa22.62■■□□□ 1.21
LINC01278-203ENST00000608788 EFCAB6Q5THR3 1501 aa22.62■■□□□ 1.21
LINC01278-203ENST00000608788 KANK4Q5T7N3 995 aaPredicted RBP22.61■■□□□ 1.21
LINC01278-203ENST00000608788 CROCC2H7BZ55 1655 aa22.6■■□□□ 1.21
LINC01278-203ENST00000608788 NWD1Q149M9 1564 aa22.59■■□□□ 1.21
LINC01278-203ENST00000608788 ABCC5O15440 1437 aa22.59■■□□□ 1.21
LINC01278-203ENST00000608788 LMTK2Q8IWU2 1503 aa22.59■■□□□ 1.21
LINC01278-203ENST00000608788 NKTRP30414 1462 aaKnown RBP22.58■■□□□ 1.2
LINC01278-203ENST00000608788 IDI1Q13907 227 aa22.57■■□□□ 1.2
LINC01278-203ENST00000608788 NOS1P29475 1434 aa22.55■■□□□ 1.2
LINC01278-203ENST00000608788 PROSER2Q86WR7 435 aaPredicted RBP22.54■■□□□ 1.2
LINC01278-203ENST00000608788 RBM33Q96EV2 1170 aaKnown RBP22.54■■□□□ 1.2
LINC01278-203ENST00000608788 SLC26A8Q96RN1 970 aa22.54■■□□□ 1.2
LINC01278-203ENST00000608788 RRP7BPQ9NSQ0 103 aa22.54■■□□□ 1.2
LINC01278-203ENST00000608788 ADGRB3O60242 1522 aa22.52■■□□□ 1.2
LINC01278-203ENST00000608788 SETD1AO15047 1707 aaKnown RBP22.52■■□□□ 1.2
LINC01278-203ENST00000608788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.51■■□□□ 1.19
LINC01278-203ENST00000608788 STAG3Q9UJ98 1225 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms