RNA–Protein interactions for RNA: ENST00000607931.1

LINC00963-209, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 473 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-209ENST00000607931 MTUS2Q5JR59 1369 aa13.48□□□□□ -0.25
LINC00963-209ENST00000607931 CLTCQ00610 1675 aaKnown RBP13.47□□□□□ -0.25
LINC00963-209ENST00000607931 MYO3AQ8NEV4 1616 aa13.47□□□□□ -0.25
LINC00963-209ENST00000607931 CEP170BQ9Y4F5 1589 aaPredicted RBP13.47□□□□□ -0.25
LINC00963-209ENST00000607931 PLXNC1O60486 1568 aa13.46□□□□□ -0.25
LINC00963-209ENST00000607931 INO80Q9ULG1 1556 aaPredicted RBP13.46□□□□□ -0.25
LINC00963-209ENST00000607931 PTPRKQ15262 1439 aa13.46□□□□□ -0.26
LINC00963-209ENST00000607931 ZNF142P52746 1687 aaPredicted RBP13.45□□□□□ -0.26
LINC00963-209ENST00000607931 TCOF1Q13428 1488 aaKnown RBP13.44□□□□□ -0.26
LINC00963-209ENST00000607931 ADGBQ8N7X0 1667 aa13.43□□□□□ -0.26
LINC00963-209ENST00000607931 A2ML1A8K2U0 1454 aa13.42□□□□□ -0.26
LINC00963-209ENST00000607931 TOM1O60784 492 aa13.41□□□□□ -0.26
LINC00963-209ENST00000607931 RTEL1-TNFRSF6BF6WH68 1400 aa13.4□□□□□ -0.26
LINC00963-209ENST00000607931 DHX29Q7Z478 1369 aaKnown RBP13.39□□□□□ -0.27
LINC00963-209ENST00000607931 KIF3BO15066 747 aa13.38□□□□□ -0.27
LINC00963-209ENST00000607931 PIP4K2BP78356 416 aa13.38□□□□□ -0.27
LINC00963-209ENST00000607931 RSPH4AQ5TD94 716 aa13.38□□□□□ -0.27
LINC00963-209ENST00000607931 CPS1P31327 1500 aa13.38□□□□□ -0.27
LINC00963-209ENST00000607931 EHBP1L1Q8N3D4 1523 aa13.38□□□□□ -0.27
LINC00963-209ENST00000607931 ZNF644Q9H582 1327 aaPredicted RBP13.38□□□□□ -0.27
LINC00963-209ENST00000607931 WASHC2CQ9Y4E1 1318 aa13.38□□□□□ -0.27
LINC00963-209ENST00000607931 TNRQ92752 1358 aa13.37□□□□□ -0.27
LINC00963-209ENST00000607931 ANKLE2Q86XL3 938 aa13.37□□□□□ -0.27
LINC00963-209ENST00000607931 DNMT1P26358 1616 aaKnown RBP13.37□□□□□ -0.27
LINC00963-209ENST00000607931 TIAM1Q13009 1591 aa13.37□□□□□ -0.27
LINC00963-209ENST00000607931 KDM5DQ9BY66 1539 aa13.36□□□□□ -0.27
LINC00963-209ENST00000607931 FAM135AQ9P2D6 1515 aa13.36□□□□□ -0.27
LINC00963-209ENST00000607931 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
LINC00963-209ENST00000607931 THEMISQ8N1K5 641 aaPredicted RBP13.36□□□□□ -0.27
LINC00963-209ENST00000607931 MBD5Q9P267 1494 aa13.36□□□□□ -0.27
LINC00963-209ENST00000607931 C1QBPQ07021 282 aaKnown RBP13.35□□□□□ -0.27
LINC00963-209ENST00000607931 CEP162Q5TB80 1403 aa13.34□□□□□ -0.27
LINC00963-209ENST00000607931 TSPY4P0CV99 314 aa13.34□□□□□ -0.27
LINC00963-209ENST00000607931 TSPY10P0CW01 314 aa13.34□□□□□ -0.27
LINC00963-209ENST00000607931 FBXO31Q5XUX0 539 aaPredicted RBP13.34□□□□□ -0.27
LINC00963-209ENST00000607931 PZPP20742 1482 aa13.34□□□□□ -0.27
LINC00963-209ENST00000607931 CCDC141Q6ZP82 1450 aa13.34□□□□□ -0.27
LINC00963-209ENST00000607931 SHANK2Q9UPX8 1470 aa13.34□□□□□ -0.27
LINC00963-209ENST00000607931 HSPA1LP34931 641 aa13.33□□□□□ -0.28
LINC00963-209ENST00000607931 POLR1AO95602 1720 aaPredicted RBP13.33□□□□□ -0.28
LINC00963-209ENST00000607931 NLRP1Q9C000 1473 aa13.32□□□□□ -0.28
LINC00963-209ENST00000607931 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.32□□□□□ -0.28
LINC00963-209ENST00000607931 CACNB1Q02641 598 aaPredicted RBP13.31□□□□□ -0.28
LINC00963-209ENST00000607931 UGGT1Q9NYU2 1555 aa13.31□□□□□ -0.28
LINC00963-209ENST00000607931 MIA2Q96PC5 1412 aa13.3□□□□□ -0.28
LINC00963-209ENST00000607931 CAMSAP2Q08AD1 1489 aa13.3□□□□□ -0.28
LINC00963-209ENST00000607931 NPHP4O75161 1426 aaPredicted RBP13.3□□□□□ -0.28
LINC00963-209ENST00000607931 MED1Q15648 1581 aaPredicted RBP13.29□□□□□ -0.28
LINC00963-209ENST00000607931 NEURL4Q96JN8 1562 aa13.29□□□□□ -0.28
LINC00963-209ENST00000607931 ZBTB22O15209 634 aa13.29□□□□□ -0.28
LINC00963-209ENST00000607931 NCOA2Q15596 1464 aa13.28□□□□□ -0.28
LINC00963-209ENST00000607931 MED14O60244 1454 aa13.27□□□□□ -0.29
LINC00963-209ENST00000607931 DEPDC5O75140 1603 aa13.26□□□□□ -0.29
LINC00963-209ENST00000607931 U3KPZ7 1027 aaPredicted RBP13.26□□□□□ -0.29
LINC00963-209ENST00000607931 ARHGEF5Q12774 1597 aa13.24□□□□□ -0.29
LINC00963-209ENST00000607931 VWDEQ8N2E2 1590 aa13.24□□□□□ -0.29
LINC00963-209ENST00000607931 IQGAP1P46940 1657 aa13.23□□□□□ -0.29
LINC00963-209ENST00000607931 ZC3H13Q5T200 1668 aaKnown RBP13.23□□□□□ -0.29
LINC00963-209ENST00000607931 SYNMO15061 1565 aa13.2□□□□□ -0.3
LINC00963-209ENST00000607931 ABCC3O15438 1527 aa13.2□□□□□ -0.3
LINC00963-209ENST00000607931 RNF17Q9BXT8 1623 aaKnown RBP13.2□□□□□ -0.3
LINC00963-209ENST00000607931 LRRC7Q96NW7 1537 aa13.19□□□□□ -0.3
LINC00963-209ENST00000607931 ERVK-7P63135 1459 aa13.19□□□□□ -0.3
LINC00963-209ENST00000607931 EID1Q9Y6B2 187 aa13.19□□□□□ -0.3
LINC00963-209ENST00000607931 EIF2AK4Q9P2K8 1649 aaKnown RBP13.19□□□□□ -0.3
LINC00963-209ENST00000607931 MAST1Q9Y2H9 1570 aa13.18□□□□□ -0.3
LINC00963-209ENST00000607931 LRRC9Q6ZRR7 1453 aa13.16□□□□□ -0.3
LINC00963-209ENST00000607931 SCAF11Q99590 1463 aaKnown RBP13.16□□□□□ -0.3
LINC00963-209ENST00000607931 TXNDC2Q86VQ3 553 aa13.16□□□□□ -0.3
LINC00963-209ENST00000607931 STAG3Q9UJ98 1225 aa13.16□□□□□ -0.3
LINC00963-209ENST00000607931 MYOM3Q5VTT5 1437 aa13.14□□□□□ -0.31
LINC00963-209ENST00000607931 DUOX2Q9NRD8 1548 aa13.14□□□□□ -0.31
LINC00963-209ENST00000607931 ALKQ9UM73 1620 aa13.14□□□□□ -0.31
LINC00963-209ENST00000607931 VPS8Q8N3P4 1428 aa13.13□□□□□ -0.31
LINC00963-209ENST00000607931 KANK1Q14678 1352 aa13.12□□□□□ -0.31
LINC00963-209ENST00000607931 FOXD4L1Q9NU39 408 aa13.12□□□□□ -0.31
LINC00963-209ENST00000607931 UBR1Q8IWV7 1749 aa13.12□□□□□ -0.31
LINC00963-209ENST00000607931 SLIT1O75093 1534 aa13.12□□□□□ -0.31
LINC00963-209ENST00000607931 LTKP29376 864 aa13.11□□□□□ -0.31
LINC00963-209ENST00000607931 ARHGAP31Q2M1Z3 1444 aa13.11□□□□□ -0.31
LINC00963-209ENST00000607931 ERBINQ96RT1 1412 aa13.11□□□□□ -0.31
LINC00963-209ENST00000607931 CEP152O94986 1710 aa13.1□□□□□ -0.31
LINC00963-209ENST00000607931 ARHGAP23Q9P227 1491 aa13.1□□□□□ -0.31
LINC00963-209ENST00000607931 MROH1Q8NDA8 1641 aa13.1□□□□□ -0.31
LINC00963-209ENST00000607931 KIF15Q9NS87 1388 aa13.1□□□□□ -0.31
LINC00963-209ENST00000607931 STRCP1A6NGW2 1772 aa13.1□□□□□ -0.31
LINC00963-209ENST00000607931 PRDM15P57071 1507 aaPredicted RBP13.09□□□□□ -0.31
LINC00963-209ENST00000607931 APLP2Q06481 763 aa13.09□□□□□ -0.31
LINC00963-209ENST00000607931 RRP7BPQ9NSQ0 103 aa13.09□□□□□ -0.31
LINC00963-209ENST00000607931 MAP3K1Q13233 1512 aa13.08□□□□□ -0.31
LINC00963-209ENST00000607931 TMEM2Q9UHN6 1383 aa13.08□□□□□ -0.31
LINC00963-209ENST00000607931 FAM135BQ49AJ0 1406 aa13.07□□□□□ -0.32
LINC00963-209ENST00000607931 KANK4Q5T7N3 995 aaPredicted RBP13.07□□□□□ -0.32
LINC00963-209ENST00000607931 BCANQ96GW7 911 aa13.07□□□□□ -0.32
LINC00963-209ENST00000607931 MYCNP04198 464 aaPredicted RBP13.06□□□□□ -0.32
LINC00963-209ENST00000607931 TMEM94Q12767 1356 aa13.06□□□□□ -0.32
LINC00963-209ENST00000607931 EFCAB6Q5THR3 1501 aa13.05□□□□□ -0.32
LINC00963-209ENST00000607931 KCNA6P17658 529 aa13.05□□□□□ -0.32
LINC00963-209ENST00000607931 PROSER2Q86WR7 435 aaPredicted RBP13.05□□□□□ -0.32
LINC00963-209ENST00000607931 PIK3C2BO00750 1634 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms