RNA–Protein interactions for RNA: ENST00000607102.1

CNN2-212, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-212ENST00000607102 BCORL1Q5H9F3 1711 aa23.74■■□□□ 1.39
CNN2-212ENST00000607102 DHX57Q6P158 1386 aaKnown RBP23.74■■□□□ 1.39
CNN2-212ENST00000607102 KANK1Q14678 1352 aa23.72■■□□□ 1.39
CNN2-212ENST00000607102 NUP155O75694 1391 aa23.71■■□□□ 1.39
CNN2-212ENST00000607102 DEPDC5O75140 1603 aa23.7■■□□□ 1.39
CNN2-212ENST00000607102 KIF3BO15066 747 aa23.7■■□□□ 1.38
CNN2-212ENST00000607102 RNF17Q9BXT8 1623 aaKnown RBP23.69■■□□□ 1.38
CNN2-212ENST00000607102 AGLP35573 1532 aa23.68■■□□□ 1.38
CNN2-212ENST00000607102 IQGAP3Q86VI3 1631 aa23.66■■□□□ 1.38
CNN2-212ENST00000607102 PRDM15P57071 1507 aaPredicted RBP23.66■■□□□ 1.38
CNN2-212ENST00000607102 SLC4A1APQ9BWU0 796 aaKnown RBP23.66■■□□□ 1.38
CNN2-212ENST00000607102 MPHOSPH9Q99550 1183 aa23.65■■□□□ 1.38
CNN2-212ENST00000607102 FAM135AQ9P2D6 1515 aa23.64■■□□□ 1.37
CNN2-212ENST00000607102 PZPP20742 1482 aa23.63■■□□□ 1.37
CNN2-212ENST00000607102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.63■■□□□ 1.37
CNN2-212ENST00000607102 ZEB1P37275 1124 aaPredicted RBP23.61■■□□□ 1.37
CNN2-212ENST00000607102 PPP6R1Q9UPN7 881 aa23.59■■□□□ 1.37
CNN2-212ENST00000607102 VWDEQ8N2E2 1590 aa23.58■■□□□ 1.37
CNN2-212ENST00000607102 MROH1Q8NDA8 1641 aa23.58■■□□□ 1.36
CNN2-212ENST00000607102 ZC3H13Q5T200 1668 aaKnown RBP23.57■■□□□ 1.36
CNN2-212ENST00000607102 GGT6Q6P531 493 aa23.56■■□□□ 1.36
CNN2-212ENST00000607102 TET3O43151 1660 aa23.56■■□□□ 1.36
CNN2-212ENST00000607102 LMTK2Q8IWU2 1503 aa23.55■■□□□ 1.36
CNN2-212ENST00000607102 PKD2Q13563 968 aa23.53■■□□□ 1.36
CNN2-212ENST00000607102 ARID4BQ4LE39 1312 aaPredicted RBP23.52■■□□□ 1.36
CNN2-212ENST00000607102 WASHC2CQ9Y4E1 1318 aa23.51■■□□□ 1.35
CNN2-212ENST00000607102 ABCC3O15438 1527 aa23.49■■□□□ 1.35
CNN2-212ENST00000607102 EFCAB6Q5THR3 1501 aa23.49■■□□□ 1.35
CNN2-212ENST00000607102 CEP152O94986 1710 aa23.48■■□□□ 1.35
CNN2-212ENST00000607102 RPRD2Q5VT52 1461 aaKnown RBP23.48■■□□□ 1.35
CNN2-212ENST00000607102 ESF1Q9H501 851 aaKnown RBP23.47■■□□□ 1.35
CNN2-212ENST00000607102 ANKRD30BQ9BXX2 1392 aa23.45■■□□□ 1.34
CNN2-212ENST00000607102 SIGLEC1Q9BZZ2 1709 aa23.45■■□□□ 1.34
CNN2-212ENST00000607102 CAMSAP1Q5T5Y3 1602 aa23.44■■□□□ 1.34
CNN2-212ENST00000607102 E9PCH4 1651 aa23.43■■□□□ 1.34
CNN2-212ENST00000607102 ARHGAP31Q2M1Z3 1444 aa23.42■■□□□ 1.34
CNN2-212ENST00000607102 CNTLNQ9NXG0 1405 aa23.42■■□□□ 1.34
CNN2-212ENST00000607102 FOXD1Q16676 465 aa23.4■■□□□ 1.34
CNN2-212ENST00000607102 TIMELESSQ9UNS1 1208 aa23.4■■□□□ 1.34
CNN2-212ENST00000607102 MLECQ14165 292 aa23.39■■□□□ 1.33
CNN2-212ENST00000607102 SPHKAPQ2M3C7 1700 aa23.39■■□□□ 1.33
CNN2-212ENST00000607102 CCDC144AA2RUR9 1427 aa23.37■■□□□ 1.33
CNN2-212ENST00000607102 CLTCQ00610 1675 aaKnown RBP23.36■■□□□ 1.33
CNN2-212ENST00000607102 TRPM2O94759 1503 aa23.36■■□□□ 1.33
CNN2-212ENST00000607102 PTPRTO14522 1441 aa23.35■■□□□ 1.33
CNN2-212ENST00000607102 NPATQ14207 1427 aa23.35■■□□□ 1.33
CNN2-212ENST00000607102 NEUROD1Q13562 356 aa23.35■■□□□ 1.33
CNN2-212ENST00000607102 MROH2AA6NES4 1674 aa23.35■■□□□ 1.33
CNN2-212ENST00000607102 TONSLQ96HA7 1378 aa23.34■■□□□ 1.33
CNN2-212ENST00000607102 SIN3AQ96ST3 1273 aa23.32■■□□□ 1.32
CNN2-212ENST00000607102 FER1L4A9Z1Z3 1794 aa23.31■■□□□ 1.32
CNN2-212ENST00000607102 PLA2R1Q13018 1463 aa23.29■■□□□ 1.32
CNN2-212ENST00000607102 NOS1P29475 1434 aa23.27■■□□□ 1.32
CNN2-212ENST00000607102 PREX1Q8TCU6 1659 aa23.26■■□□□ 1.31
CNN2-212ENST00000607102 ZMYM3Q14202 1370 aa23.26■■□□□ 1.31
CNN2-212ENST00000607102 ERVK-7P63135 1459 aa23.24■■□□□ 1.31
CNN2-212ENST00000607102 NEURL4Q96JN8 1562 aa23.23■■□□□ 1.31
CNN2-212ENST00000607102 SLC52A1Q9NWF4 448 aa23.22■■□□□ 1.31
CNN2-212ENST00000607102 SPATA31D1Q6ZQQ2 1576 aa23.22■■□□□ 1.31
CNN2-212ENST00000607102 CLTCL1P53675 1640 aa23.22■■□□□ 1.31
CNN2-212ENST00000607102 ADAMTSL3P82987 1691 aa23.21■■□□□ 1.31
CNN2-212ENST00000607102 CFAP65Q6ZU64 1925 aaKnown RBP23.21■■□□□ 1.31
CNN2-212ENST00000607102 KIF1BO60333 1816 aa23.2■■□□□ 1.3
CNN2-212ENST00000607102 MADDQ8WXG6 1647 aa23.19■■□□□ 1.3
CNN2-212ENST00000607102 SYNMO15061 1565 aa23.18■■□□□ 1.3
CNN2-212ENST00000607102 PIK3C2BO00750 1634 aa23.18■■□□□ 1.3
CNN2-212ENST00000607102 C3P01024 1663 aa23.16■■□□□ 1.3
CNN2-212ENST00000607102 RIMS1Q86UR5 1692 aaKnown RBP23.16■■□□□ 1.3
CNN2-212ENST00000607102 STAC3Q96MF2 364 aa23.15■■□□□ 1.3
CNN2-212ENST00000607102 TNRQ92752 1358 aa23.14■■□□□ 1.29
CNN2-212ENST00000607102 SPATA31E1Q6ZUB1 1445 aa23.13■■□□□ 1.29
CNN2-212ENST00000607102 FBXO31Q5XUX0 539 aaPredicted RBP23.12■■□□□ 1.29
CNN2-212ENST00000607102 L3MBTL2Q969R5 705 aa23.12■■□□□ 1.29
CNN2-212ENST00000607102 UGGT1Q9NYU2 1555 aa23.12■■□□□ 1.29
CNN2-212ENST00000607102 ADGRB3O60242 1522 aa23.11■■□□□ 1.29
CNN2-212ENST00000607102 PPP1R15AO75807 674 aaPredicted RBP23.1■■□□□ 1.29
CNN2-212ENST00000607102 NLRP1Q9C000 1473 aa23.1■■□□□ 1.29
CNN2-212ENST00000607102 CHGAP10645 457 aaKnown RBP23.08■■□□□ 1.29
CNN2-212ENST00000607102 RGL3Q3MIN7 710 aa23.08■■□□□ 1.29
CNN2-212ENST00000607102 IDI1Q13907 227 aa23.07■■□□□ 1.28
CNN2-212ENST00000607102 STAG3Q9UJ98 1225 aa23.07■■□□□ 1.28
CNN2-212ENST00000607102 RPGRIP1LQ68CZ1 1315 aa23.07■■□□□ 1.28
CNN2-212ENST00000607102 KDM5AP29375 1690 aaKnown RBP23.06■■□□□ 1.28
CNN2-212ENST00000607102 ZNF326Q5BKZ1 582 aaKnown RBP23.04■■□□□ 1.28
CNN2-212ENST00000607102 DCAF11Q8TEB1 546 aa23.04■■□□□ 1.28
CNN2-212ENST00000607102 TMEM131LA2VDJ0 1609 aa23.03■■□□□ 1.28
CNN2-212ENST00000607102 CEBPAP49715 358 aaPredicted RBP23.02■■□□□ 1.28
CNN2-212ENST00000607102 UHRF1BP1Q6BDS2 1440 aa23.01■■□□□ 1.27
CNN2-212ENST00000607102 PTPRMP28827 1452 aa23.01■■□□□ 1.27
CNN2-212ENST00000607102 MYOM2P54296 1465 aa23■■□□□ 1.27
CNN2-212ENST00000607102 MYO3AQ8NEV4 1616 aa22.98■■□□□ 1.27
CNN2-212ENST00000607102 PLPPR3Q6T4P5 718 aa22.98■■□□□ 1.27
CNN2-212ENST00000607102 KDM2AQ9Y2K7 1162 aa22.98■■□□□ 1.27
CNN2-212ENST00000607102 IFT172Q9UG01 1749 aa22.98■■□□□ 1.27
CNN2-212ENST00000607102 SETD1BQ9UPS6 1966 aaKnown RBP22.98■■□□□ 1.27
CNN2-212ENST00000607102 HDGFP51858 240 aaKnown RBP22.97■■□□□ 1.27
CNN2-212ENST00000607102 PPLO60437 1756 aa22.96■■□□□ 1.27
CNN2-212ENST00000607102 A2ML1A8K2U0 1454 aa22.96■■□□□ 1.27
CNN2-212ENST00000607102 VGFO15240 615 aaPredicted RBP22.95■■□□□ 1.26
CNN2-212ENST00000607102 PRAG1Q86YV5 1406 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms