RNA–Protein interactions for RNA: ENST00000605166.1

HMGB1P51-201, Transcript of high mobility group box 1 pseudogene 51, humanhuman

BASIC

Gene HMGB1P51, Length 638 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P51-201ENST00000605166 POTEBQ6S5H4 581 aa10.58□□□□□ -0.72
HMGB1P51-201ENST00000605166 OXER1Q8TDS5 423 aa10.58□□□□□ -0.72
HMGB1P51-201ENST00000605166 UPF1Q92900 1129 aaKnown RBP eCLIP10.56□□□□□ -0.72
HMGB1P51-201ENST00000605166 LHX6Q9UPM6 363 aa10.56□□□□□ -0.72
HMGB1P51-201ENST00000605166 MAP3K9P80192 1104 aa10.54□□□□□ -0.72
HMGB1P51-201ENST00000605166 MINK1Q8N4C8 1332 aaPredicted RBP10.54□□□□□ -0.72
HMGB1P51-201ENST00000605166 KDM4FA0A1W2PPD8 638 aa10.51□□□□□ -0.73
HMGB1P51-201ENST00000605166 PBX2P40425 430 aa10.51□□□□□ -0.73
HMGB1P51-201ENST00000605166 MAP2K5Q13163 448 aa10.51□□□□□ -0.73
HMGB1P51-201ENST00000605166 PPP4R3BQ5MIZ7 849 aa10.5□□□□□ -0.73
HMGB1P51-201ENST00000605166 ZMYND15Q9H091 742 aa10.5□□□□□ -0.73
HMGB1P51-201ENST00000605166 GRXCR2A6NFK2 248 aa10.49□□□□□ -0.73
HMGB1P51-201ENST00000605166 KRTAP3-3Q9BYR6 98 aa10.49□□□□□ -0.73
HMGB1P51-201ENST00000605166 KRTAP3-2Q9BYR7 98 aa10.49□□□□□ -0.73
HMGB1P51-201ENST00000605166 NUTM2FA1L443 756 aa10.48□□□□□ -0.73
HMGB1P51-201ENST00000605166 CCDC102AQ96A19 550 aa10.48□□□□□ -0.73
HMGB1P51-201ENST00000605166 FAM117AQ9C073 453 aa10.48□□□□□ -0.73
HMGB1P51-201ENST00000605166 IRF6O14896 467 aa10.47□□□□□ -0.73
HMGB1P51-201ENST00000605166 EVI5O60447 810 aa10.47□□□□□ -0.73
HMGB1P51-201ENST00000605166 AMHR2Q16671 573 aa10.47□□□□□ -0.73
HMGB1P51-201ENST00000605166 DDRGK1Q96HY6 314 aa10.47□□□□□ -0.73
HMGB1P51-201ENST00000605166 KCNH8Q96L42 1107 aa10.47□□□□□ -0.73
HMGB1P51-201ENST00000605166 GNPATO15228 680 aa10.46□□□□□ -0.73
HMGB1P51-201ENST00000605166 SPNS2Q8IVW8 549 aa10.46□□□□□ -0.73
HMGB1P51-201ENST00000605166 RSPH6AQ9H0K4 717 aa10.46□□□□□ -0.73
HMGB1P51-201ENST00000605166 ANO8Q9HCE9 1232 aaPredicted RBP10.46□□□□□ -0.73
HMGB1P51-201ENST00000605166 OSBPP22059 807 aa10.45□□□□□ -0.74
HMGB1P51-201ENST00000605166 PTGER2P43116 358 aa10.45□□□□□ -0.74
HMGB1P51-201ENST00000605166 HIC1Q14526 733 aa10.44□□□□□ -0.74
HMGB1P51-201ENST00000605166 ARHGAP33O14559 1287 aa10.43□□□□□ -0.74
HMGB1P51-201ENST00000605166 FCHSD2O94868 740 aa10.43□□□□□ -0.74
HMGB1P51-201ENST00000605166 PLEKHG3A1L390 1219 aa10.42□□□□□ -0.74
HMGB1P51-201ENST00000605166 PARP9Q8IXQ6 854 aa10.42□□□□□ -0.74
HMGB1P51-201ENST00000605166 ZNF454Q8N9F8 522 aa10.42□□□□□ -0.74
HMGB1P51-201ENST00000605166 ANKRD13DQ6ZTN6 518 aa10.41□□□□□ -0.74
HMGB1P51-201ENST00000605166 LSM11P83369 360 aaKnown RBP eCLIP10.4□□□□□ -0.74
HMGB1P51-201ENST00000605166 JPH4Q96JJ6 628 aa10.4□□□□□ -0.74
HMGB1P51-201ENST00000605166 FOSBP53539 338 aa10.38□□□□□ -0.75
HMGB1P51-201ENST00000605166 MMRN1Q13201 1228 aa10.38□□□□□ -0.75
HMGB1P51-201ENST00000605166 DDX12PQ92771 950 aa10.38□□□□□ -0.75
HMGB1P51-201ENST00000605166 FECHP22830 423 aa10.37□□□□□ -0.75
HMGB1P51-201ENST00000605166 GOPCQ9HD26 462 aa10.37□□□□□ -0.75
HMGB1P51-201ENST00000605166 ZDHHC16Q969W1 377 aa10.36□□□□□ -0.75
HMGB1P51-201ENST00000605166 AXIN2Q9Y2T1 843 aa10.36□□□□□ -0.75
HMGB1P51-201ENST00000605166 FLIIQ13045 1269 aa10.35□□□□□ -0.75
HMGB1P51-201ENST00000605166 PTGDRQ13258 359 aa10.35□□□□□ -0.75
HMGB1P51-201ENST00000605166 FBXW7Q969H0 707 aa10.35□□□□□ -0.75
HMGB1P51-201ENST00000605166 BCL2L12Q9HB09 334 aa10.35□□□□□ -0.75
HMGB1P51-201ENST00000605166 PTPREP23469 700 aa10.34□□□□□ -0.75
HMGB1P51-201ENST00000605166 TTLL12Q14166 644 aaPredicted RBP10.34□□□□□ -0.75
HMGB1P51-201ENST00000605166 TK2O00142 265 aa10.33□□□□□ -0.76
HMGB1P51-201ENST00000605166 PHF14O94880 888 aa10.33□□□□□ -0.76
HMGB1P51-201ENST00000605166 KCNK17Q96T54 332 aa10.33□□□□□ -0.76
HMGB1P51-201ENST00000605166 EPAS1Q99814 870 aa10.33□□□□□ -0.76
HMGB1P51-201ENST00000605166 PRIM1P49642 420 aaKnown RBP10.32□□□□□ -0.76
HMGB1P51-201ENST00000605166 TYW1BQ6NUM6 668 aa10.32□□□□□ -0.76
HMGB1P51-201ENST00000605166 POTEEQ6S8J3 1075 aa10.32□□□□□ -0.76
HMGB1P51-201ENST00000605166 STAC3Q96MF2 364 aa10.32□□□□□ -0.76
HMGB1P51-201ENST00000605166 MYT1LQ9UL68 1186 aa10.32□□□□□ -0.76
HMGB1P51-201ENST00000605166 UBTFP17480 764 aaKnown RBP10.31□□□□□ -0.76
HMGB1P51-201ENST00000605166 PSEN2P49810 448 aa10.3□□□□□ -0.76
HMGB1P51-201ENST00000605166 GIGYF2Q6Y7W6 1299 aaKnown RBP10.3□□□□□ -0.76
HMGB1P51-201ENST00000605166 ADGRD1Q6QNK2 874 aa10.29□□□□□ -0.76
HMGB1P51-201ENST00000605166 PCDHGA10Q9Y5H3 936 aa10.29□□□□□ -0.76
HMGB1P51-201ENST00000605166 ONECUT3O60422 494 aaPredicted RBP10.27□□□□□ -0.77
HMGB1P51-201ENST00000605166 MS4A1P11836 297 aa10.27□□□□□ -0.77
HMGB1P51-201ENST00000605166 RNF166Q96A37 237 aaPredicted RBP10.27□□□□□ -0.77
HMGB1P51-201ENST00000605166 SLC4A5Q9BY07 1137 aa10.27□□□□□ -0.77
HMGB1P51-201ENST00000605166 ADAM33Q9BZ11 813 aa10.27□□□□□ -0.77
HMGB1P51-201ENST00000605166 DMRTA1Q5VZB9 504 aa10.26□□□□□ -0.77
HMGB1P51-201ENST00000605166 PCMTD1Q96MG8 357 aaPredicted RBP10.26□□□□□ -0.77
HMGB1P51-201ENST00000605166 C1orf115Q9H7X2 142 aa10.25□□□□□ -0.77
HMGB1P51-201ENST00000605166 EN1Q05925 392 aaPredicted RBP10.24□□□□□ -0.77
HMGB1P51-201ENST00000605166 REPIN1Q9BWE0 567 aaKnown RBP10.24□□□□□ -0.77
HMGB1P51-201ENST00000605166 CLCN1P35523 988 aa10.23□□□□□ -0.77
HMGB1P51-201ENST00000605166 SH3D19Q5HYK7 790 aa10.23□□□□□ -0.77
HMGB1P51-201ENST00000605166 PPP1R3GB7ZBB8 358 aa10.22□□□□□ -0.77
HMGB1P51-201ENST00000605166 TMUB1Q9BVT8 246 aa10.22□□□□□ -0.77
HMGB1P51-201ENST00000605166 CDHR5Q9HBB8 845 aa10.22□□□□□ -0.77
HMGB1P51-201ENST00000605166 NPDC1Q9NQX5 325 aaPredicted RBP10.22□□□□□ -0.77
HMGB1P51-201ENST00000605166 VPS9D1Q9Y2B5 631 aa10.22□□□□□ -0.77
HMGB1P51-201ENST00000605166 GPCPD1Q9NPB8 672 aa10.21□□□□□ -0.77
HMGB1P51-201ENST00000605166 A6NJR5 290 aa10.2□□□□□ -0.78
HMGB1P51-201ENST00000605166 C6orf132Q5T0Z8 1188 aa10.2□□□□□ -0.78
HMGB1P51-201ENST00000605166 ARID3AQ99856 593 aa10.2□□□□□ -0.78
HMGB1P51-201ENST00000605166 ZBED2Q9BTP6 218 aa10.2□□□□□ -0.78
HMGB1P51-201ENST00000605166 APBB1O00213 710 aa10.19□□□□□ -0.78
HMGB1P51-201ENST00000605166 MAP3K7O43318 606 aa10.19□□□□□ -0.78
HMGB1P51-201ENST00000605166 HRO43593 1189 aa10.19□□□□□ -0.78
HMGB1P51-201ENST00000605166 RBM33Q96EV2 1170 aaKnown RBP10.19□□□□□ -0.78
HMGB1P51-201ENST00000605166 ARID3CA6NKF2 412 aa10.18□□□□□ -0.78
HMGB1P51-201ENST00000605166 PODXL2Q9NZ53 605 aa10.18□□□□□ -0.78
HMGB1P51-201ENST00000605166 MDM2Q00987 491 aaPredicted RBP10.17□□□□□ -0.78
HMGB1P51-201ENST00000605166 NBPF3Q9H094 633 aa10.17□□□□□ -0.78
HMGB1P51-201ENST00000605166 GOLGA8CPA6NN73 597 aa10.16□□□□□ -0.78
HMGB1P51-201ENST00000605166 SKIV2LQ15477 1246 aaKnown RBP10.16□□□□□ -0.78
HMGB1P51-201ENST00000605166 SSTR3P32745 418 aaPredicted RBP10.15□□□□□ -0.78
HMGB1P51-201ENST00000605166 MCM6Q14566 821 aa10.15□□□□□ -0.78
HMGB1P51-201ENST00000605166 MRPL50Q8N5N7 158 aaKnown RBP10.15□□□□□ -0.78
HMGB1P51-201ENST00000605166 CERKQ8TCT0 537 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms