RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 ESF1Q9H501 851 aaKnown RBP16.67■□□□□ 0.26
TUBE1-210ENST00000604967 UHRF1BP1Q6BDS2 1440 aa16.67■□□□□ 0.26
TUBE1-210ENST00000604967 SETD1BQ9UPS6 1966 aaKnown RBP16.66■□□□□ 0.26
TUBE1-210ENST00000604967 KIF15Q9NS87 1388 aa16.65■□□□□ 0.26
TUBE1-210ENST00000604967 RRP7BPQ9NSQ0 103 aa16.65■□□□□ 0.26
TUBE1-210ENST00000604967 PPP6R1Q9UPN7 881 aa16.65■□□□□ 0.26
TUBE1-210ENST00000604967 KDM5DQ9BY66 1539 aa16.65■□□□□ 0.26
TUBE1-210ENST00000604967 CHIC2Q9UKJ5 165 aa16.64■□□□□ 0.25
TUBE1-210ENST00000604967 DUOX2Q9NRD8 1548 aa16.64■□□□□ 0.25
TUBE1-210ENST00000604967 ABCC3O15438 1527 aa16.63■□□□□ 0.25
TUBE1-210ENST00000604967 MYO3AQ8NEV4 1616 aa16.63■□□□□ 0.25
TUBE1-210ENST00000604967 EIF2AK4Q9P2K8 1649 aaKnown RBP16.62■□□□□ 0.25
TUBE1-210ENST00000604967 NCOA1Q15788 1441 aa16.62■□□□□ 0.25
TUBE1-210ENST00000604967 PZPP20742 1482 aa16.61■□□□□ 0.25
TUBE1-210ENST00000604967 FAM50AQ14320 339 aaKnown RBP16.6■□□□□ 0.25
TUBE1-210ENST00000604967 ILDR1Q86SU0 546 aaPredicted RBP16.6■□□□□ 0.25
TUBE1-210ENST00000604967 WASHC2CQ9Y4E1 1318 aa16.6■□□□□ 0.25
TUBE1-210ENST00000604967 ADGRL2O95490 1459 aa16.6■□□□□ 0.25
TUBE1-210ENST00000604967 FAM135AQ9P2D6 1515 aa16.6■□□□□ 0.25
TUBE1-210ENST00000604967 CEP170BQ9Y4F5 1589 aaPredicted RBP16.58■□□□□ 0.24
TUBE1-210ENST00000604967 ZNF142P52746 1687 aaPredicted RBP16.58■□□□□ 0.24
TUBE1-210ENST00000604967 CEP152O94986 1710 aa16.57■□□□□ 0.24
TUBE1-210ENST00000604967 CAMSAP1Q5T5Y3 1602 aa16.57■□□□□ 0.24
TUBE1-210ENST00000604967 PRDM15P57071 1507 aaPredicted RBP16.57■□□□□ 0.24
TUBE1-210ENST00000604967 ERBINQ96RT1 1412 aa16.57■□□□□ 0.24
TUBE1-210ENST00000604967 DEPDC5O75140 1603 aa16.56■□□□□ 0.24
TUBE1-210ENST00000604967 TNRQ92752 1358 aa16.55■□□□□ 0.24
TUBE1-210ENST00000604967 ANKRD30AQ9BXX3 1397 aa16.54■□□□□ 0.24
TUBE1-210ENST00000604967 NCKAP5LQ9HCH0 1330 aa16.54■□□□□ 0.24
TUBE1-210ENST00000604967 VWDEQ8N2E2 1590 aa16.54■□□□□ 0.24
TUBE1-210ENST00000604967 A2ML1A8K2U0 1454 aa16.54■□□□□ 0.24
TUBE1-210ENST00000604967 ZC3H13Q5T200 1668 aaKnown RBP16.53■□□□□ 0.24
TUBE1-210ENST00000604967 SPATA31D1Q6ZQQ2 1576 aa16.52■□□□□ 0.24
TUBE1-210ENST00000604967 ERVK-7P63135 1459 aa16.52■□□□□ 0.23
TUBE1-210ENST00000604967 PTPRTO14522 1441 aa16.51■□□□□ 0.23
TUBE1-210ENST00000604967 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.5■□□□□ 0.23
TUBE1-210ENST00000604967 PLA2R1Q13018 1463 aa16.49■□□□□ 0.23
TUBE1-210ENST00000604967 ARHGAP31Q2M1Z3 1444 aa16.48■□□□□ 0.23
TUBE1-210ENST00000604967 LMTK2Q8IWU2 1503 aa16.48■□□□□ 0.23
TUBE1-210ENST00000604967 NEURL4Q96JN8 1562 aa16.47■□□□□ 0.23
TUBE1-210ENST00000604967 ANKRD50Q9ULJ7 1429 aa16.47■□□□□ 0.23
TUBE1-210ENST00000604967 LTBP4Q8N2S1 1624 aa16.47■□□□□ 0.23
TUBE1-210ENST00000604967 RRBP1Q9P2E9 1410 aaKnown RBP16.46■□□□□ 0.23
TUBE1-210ENST00000604967 CFAP65Q6ZU64 1925 aaKnown RBP16.46■□□□□ 0.23
TUBE1-210ENST00000604967 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.46■□□□□ 0.23
TUBE1-210ENST00000604967 ITGAEP38570 1179 aa16.45■□□□□ 0.22
TUBE1-210ENST00000604967 ROCK1Q13464 1354 aa16.45■□□□□ 0.22
TUBE1-210ENST00000604967 NLRP1Q9C000 1473 aa16.45■□□□□ 0.22
TUBE1-210ENST00000604967 CERKQ8TCT0 537 aa16.44■□□□□ 0.22
TUBE1-210ENST00000604967 DMRT2Q9Y5R5 561 aa16.43■□□□□ 0.22
TUBE1-210ENST00000604967 EFCAB6Q5THR3 1501 aa16.43■□□□□ 0.22
TUBE1-210ENST00000604967 SYNMO15061 1565 aa16.43■□□□□ 0.22
TUBE1-210ENST00000604967 UGGT1Q9NYU2 1555 aa16.43■□□□□ 0.22
TUBE1-210ENST00000604967 UNC13BO14795 1591 aa16.42■□□□□ 0.22
TUBE1-210ENST00000604967 FBXO41Q8TF61 875 aa16.41■□□□□ 0.22
TUBE1-210ENST00000604967 ZNF335Q9H4Z2 1342 aaPredicted RBP16.41■□□□□ 0.22
TUBE1-210ENST00000604967 UBR1Q8IWV7 1749 aa16.4■□□□□ 0.22
TUBE1-210ENST00000604967 NOS1P29475 1434 aa16.4■□□□□ 0.22
TUBE1-210ENST00000604967 PKD2Q13563 968 aa16.4■□□□□ 0.22
TUBE1-210ENST00000604967 KANK1Q14678 1352 aa16.38■□□□□ 0.21
TUBE1-210ENST00000604967 PIK3C2BO00750 1634 aa16.37■□□□□ 0.21
TUBE1-210ENST00000604967 POLR1AO95602 1720 aaPredicted RBP16.37■□□□□ 0.21
TUBE1-210ENST00000604967 IDI1Q13907 227 aa16.37■□□□□ 0.21
TUBE1-210ENST00000604967 LTKP29376 864 aa16.36■□□□□ 0.21
TUBE1-210ENST00000604967 THEMISQ8N1K5 641 aaPredicted RBP16.36■□□□□ 0.21
TUBE1-210ENST00000604967 MED14O60244 1454 aa16.35■□□□□ 0.21
TUBE1-210ENST00000604967 ARHGAP23Q9P227 1491 aa16.35■□□□□ 0.21
TUBE1-210ENST00000604967 TET3O43151 1660 aa16.35■□□□□ 0.21
TUBE1-210ENST00000604967 NAIPQ13075 1403 aa16.34■□□□□ 0.21
TUBE1-210ENST00000604967 IQGAP3Q86VI3 1631 aa16.34■□□□□ 0.21
TUBE1-210ENST00000604967 E9PCH4 1651 aa16.34■□□□□ 0.21
TUBE1-210ENST00000604967 SLIT1O75093 1534 aa16.33■□□□□ 0.2
TUBE1-210ENST00000604967 NPHP4O75161 1426 aaPredicted RBP16.32■□□□□ 0.2
TUBE1-210ENST00000604967 ANKLE2Q86XL3 938 aa16.32■□□□□ 0.2
TUBE1-210ENST00000604967 GCC2Q8IWJ2 1684 aa16.3■□□□□ 0.2
TUBE1-210ENST00000604967 RPRD2Q5VT52 1461 aaKnown RBP16.3■□□□□ 0.2
TUBE1-210ENST00000604967 NUP155O75694 1391 aa16.3■□□□□ 0.2
TUBE1-210ENST00000604967 TMEM2Q9UHN6 1383 aa16.29■□□□□ 0.2
TUBE1-210ENST00000604967 STRCP1A6NGW2 1772 aa16.29■□□□□ 0.2
TUBE1-210ENST00000604967 IQGAP1P46940 1657 aa16.29■□□□□ 0.2
TUBE1-210ENST00000604967 SCAF11Q99590 1463 aaKnown RBP16.29■□□□□ 0.2
TUBE1-210ENST00000604967 ADGRB3O60242 1522 aa16.28■□□□□ 0.2
TUBE1-210ENST00000604967 TXNDC2Q86VQ3 553 aa16.26■□□□□ 0.19
TUBE1-210ENST00000604967 KDM5AP29375 1690 aaKnown RBP16.26■□□□□ 0.19
TUBE1-210ENST00000604967 HFM1A2PYH4 1435 aa16.26■□□□□ 0.19
TUBE1-210ENST00000604967 MYO5BQ9ULV0 1848 aa16.25■□□□□ 0.19
TUBE1-210ENST00000604967 TMEM131LA2VDJ0 1609 aa16.25■□□□□ 0.19
TUBE1-210ENST00000604967 SLC52A1Q9NWF4 448 aa16.24■□□□□ 0.19
TUBE1-210ENST00000604967 ZFYVE9O95405 1425 aa16.24■□□□□ 0.19
TUBE1-210ENST00000604967 IQSEC2Q5JU85 1478 aa16.23■□□□□ 0.19
TUBE1-210ENST00000604967 ALKQ9UM73 1620 aa16.22■□□□□ 0.19
TUBE1-210ENST00000604967 SENP3Q9H4L4 574 aaPredicted RBP16.2■□□□□ 0.18
TUBE1-210ENST00000604967 CPS1P31327 1500 aa16.19■□□□□ 0.18
TUBE1-210ENST00000604967 LRRC7Q96NW7 1537 aa16.19■□□□□ 0.18
TUBE1-210ENST00000604967 STAG3Q9UJ98 1225 aa16.18■□□□□ 0.18
TUBE1-210ENST00000604967 RIMS2Q9UQ26 1411 aa16.18■□□□□ 0.18
TUBE1-210ENST00000604967 SLC26A8Q96RN1 970 aa16.17■□□□□ 0.18
TUBE1-210ENST00000604967 NUTM2DQ5VT03 806 aaPredicted RBP16.16■□□□□ 0.18
TUBE1-210ENST00000604967 EID1Q9Y6B2 187 aa16.16■□□□□ 0.18
TUBE1-210ENST00000604967 SPHKAPQ2M3C7 1700 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms