RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 FOXD1Q16676 465 aa19.22■□□□□ 0.67
PDLIM1P1-201ENST00000604187 FBXO31Q5XUX0 539 aaPredicted RBP19.22■□□□□ 0.67
PDLIM1P1-201ENST00000604187 ZNF644Q9H582 1327 aaPredicted RBP19.22■□□□□ 0.67
PDLIM1P1-201ENST00000604187 NEURL4Q96JN8 1562 aa19.2■□□□□ 0.66
PDLIM1P1-201ENST00000604187 MTUS2Q5JR59 1369 aa19.19■□□□□ 0.66
PDLIM1P1-201ENST00000604187 DHX29Q7Z478 1369 aaKnown RBP19.18■□□□□ 0.66
PDLIM1P1-201ENST00000604187 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.18■□□□□ 0.66
PDLIM1P1-201ENST00000604187 MBD5Q9P267 1494 aa19.17■□□□□ 0.66
PDLIM1P1-201ENST00000604187 ANKLE2Q86XL3 938 aa19.17■□□□□ 0.66
PDLIM1P1-201ENST00000604187 PZPP20742 1482 aa19.16■□□□□ 0.66
PDLIM1P1-201ENST00000604187 KIF3BO15066 747 aa19.15■□□□□ 0.66
PDLIM1P1-201ENST00000604187 RTEL1-TNFRSF6BF6WH68 1400 aa19.15■□□□□ 0.66
PDLIM1P1-201ENST00000604187 ADGBQ8N7X0 1667 aa19.14■□□□□ 0.66
PDLIM1P1-201ENST00000604187 NPHP4O75161 1426 aaPredicted RBP19.14■□□□□ 0.65
PDLIM1P1-201ENST00000604187 KDM5DQ9BY66 1539 aa19.14■□□□□ 0.65
PDLIM1P1-201ENST00000604187 VWDEQ8N2E2 1590 aa19.14■□□□□ 0.65
PDLIM1P1-201ENST00000604187 WASHC2CQ9Y4E1 1318 aa19.13■□□□□ 0.65
PDLIM1P1-201ENST00000604187 THEMISQ8N1K5 641 aaPredicted RBP19.12■□□□□ 0.65
PDLIM1P1-201ENST00000604187 ALKQ9UM73 1620 aa19.11■□□□□ 0.65
PDLIM1P1-201ENST00000604187 TIAM1Q13009 1591 aa19.11■□□□□ 0.65
PDLIM1P1-201ENST00000604187 MIA2Q96PC5 1412 aa19.11■□□□□ 0.65
PDLIM1P1-201ENST00000604187 NLRP1Q9C000 1473 aa19.1■□□□□ 0.65
PDLIM1P1-201ENST00000604187 POLR1AO95602 1720 aaPredicted RBP19.09■□□□□ 0.65
PDLIM1P1-201ENST00000604187 FAM135AQ9P2D6 1515 aa19.09■□□□□ 0.65
PDLIM1P1-201ENST00000604187 MED14O60244 1454 aa19.09■□□□□ 0.65
PDLIM1P1-201ENST00000604187 UGGT1Q9NYU2 1555 aa19.08■□□□□ 0.65
PDLIM1P1-201ENST00000604187 CCDC141Q6ZP82 1450 aa19.07■□□□□ 0.64
PDLIM1P1-201ENST00000604187 EHBP1L1Q8N3D4 1523 aa19.05■□□□□ 0.64
PDLIM1P1-201ENST00000604187 CEP162Q5TB80 1403 aa19.05■□□□□ 0.64
PDLIM1P1-201ENST00000604187 LRRC7Q96NW7 1537 aa19.05■□□□□ 0.64
PDLIM1P1-201ENST00000604187 DEPDC5O75140 1603 aa19.03■□□□□ 0.64
PDLIM1P1-201ENST00000604187 CAMSAP2Q08AD1 1489 aa19.02■□□□□ 0.63
PDLIM1P1-201ENST00000604187 RNF17Q9BXT8 1623 aaKnown RBP18.99■□□□□ 0.63
PDLIM1P1-201ENST00000604187 IQGAP1P46940 1657 aa18.98■□□□□ 0.63
PDLIM1P1-201ENST00000604187 RSPH4AQ5TD94 716 aa18.98■□□□□ 0.63
PDLIM1P1-201ENST00000604187 RGS17Q9UGC6 210 aaPredicted RBP18.98■□□□□ 0.63
PDLIM1P1-201ENST00000604187 SYNMO15061 1565 aa18.97■□□□□ 0.63
PDLIM1P1-201ENST00000604187 NCOA2Q15596 1464 aa18.97■□□□□ 0.63
PDLIM1P1-201ENST00000604187 ABCC3O15438 1527 aa18.95■□□□□ 0.62
PDLIM1P1-201ENST00000604187 TSPY4P0CV99 314 aa18.95■□□□□ 0.62
PDLIM1P1-201ENST00000604187 TSPY10P0CW01 314 aa18.95■□□□□ 0.62
PDLIM1P1-201ENST00000604187 ERVK-7P63135 1459 aa18.95■□□□□ 0.62
PDLIM1P1-201ENST00000604187 SCAF11Q99590 1463 aaKnown RBP18.92■□□□□ 0.62
PDLIM1P1-201ENST00000604187 STRCP1A6NGW2 1772 aa18.91■□□□□ 0.62
PDLIM1P1-201ENST00000604187 ARHGEF5Q12774 1597 aa18.9■□□□□ 0.62
PDLIM1P1-201ENST00000604187 LTKP29376 864 aa18.89■□□□□ 0.61
PDLIM1P1-201ENST00000604187 TXNDC2Q86VQ3 553 aa18.88■□□□□ 0.61
PDLIM1P1-201ENST00000604187 POTEAQ6S8J7 498 aa18.86■□□□□ 0.61
PDLIM1P1-201ENST00000604187 ZC3H13Q5T200 1668 aaKnown RBP18.85■□□□□ 0.61
PDLIM1P1-201ENST00000604187 ARHGAP23Q9P227 1491 aa18.85■□□□□ 0.61
PDLIM1P1-201ENST00000604187 FAM135BQ49AJ0 1406 aa18.84■□□□□ 0.61
PDLIM1P1-201ENST00000604187 MROH1Q8NDA8 1641 aa18.83■□□□□ 0.61
PDLIM1P1-201ENST00000604187 EID1Q9Y6B2 187 aa18.83■□□□□ 0.6
PDLIM1P1-201ENST00000604187 SLIT1O75093 1534 aa18.83■□□□□ 0.6
PDLIM1P1-201ENST00000604187 TMEM94Q12767 1356 aa18.82■□□□□ 0.6
PDLIM1P1-201ENST00000604187 MAST1Q9Y2H9 1570 aa18.81■□□□□ 0.6
PDLIM1P1-201ENST00000604187 UBR1Q8IWV7 1749 aa18.8■□□□□ 0.6
PDLIM1P1-201ENST00000604187 EIF2AK4Q9P2K8 1649 aaKnown RBP18.79■□□□□ 0.6
PDLIM1P1-201ENST00000604187 TMEM2Q9UHN6 1383 aa18.79■□□□□ 0.6
PDLIM1P1-201ENST00000604187 ARHGAP31Q2M1Z3 1444 aa18.77■□□□□ 0.6
PDLIM1P1-201ENST00000604187 RBM33Q96EV2 1170 aaKnown RBP18.76■□□□□ 0.59
PDLIM1P1-201ENST00000604187 STAG3Q9UJ98 1225 aa18.76■□□□□ 0.59
PDLIM1P1-201ENST00000604187 KCNA6P17658 529 aa18.75■□□□□ 0.59
PDLIM1P1-201ENST00000604187 DUOX2Q9NRD8 1548 aa18.74■□□□□ 0.59
PDLIM1P1-201ENST00000604187 LRRC9Q6ZRR7 1453 aa18.74■□□□□ 0.59
PDLIM1P1-201ENST00000604187 KIF15Q9NS87 1388 aa18.74■□□□□ 0.59
PDLIM1P1-201ENST00000604187 PRDM15P57071 1507 aaPredicted RBP18.74■□□□□ 0.59
PDLIM1P1-201ENST00000604187 MAP3K1Q13233 1512 aa18.74■□□□□ 0.59
PDLIM1P1-201ENST00000604187 PROSER2Q86WR7 435 aaPredicted RBP18.73■□□□□ 0.59
PDLIM1P1-201ENST00000604187 SLC26A8Q96RN1 970 aa18.73■□□□□ 0.59
PDLIM1P1-201ENST00000604187 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.73■□□□□ 0.59
PDLIM1P1-201ENST00000604187 CEP152O94986 1710 aa18.72■□□□□ 0.59
PDLIM1P1-201ENST00000604187 MYOM3Q5VTT5 1437 aa18.72■□□□□ 0.59
PDLIM1P1-201ENST00000604187 ERBINQ96RT1 1412 aa18.71■□□□□ 0.59
PDLIM1P1-201ENST00000604187 XIRP1Q702N8 1843 aaKnown RBP18.7■□□□□ 0.58
PDLIM1P1-201ENST00000604187 ROBO1Q9Y6N7 1651 aa18.69■□□□□ 0.58
PDLIM1P1-201ENST00000604187 EFCAB6Q5THR3 1501 aa18.69■□□□□ 0.58
PDLIM1P1-201ENST00000604187 RRP7BPQ9NSQ0 103 aa18.69■□□□□ 0.58
PDLIM1P1-201ENST00000604187 PIK3C2BO00750 1634 aa18.69■□□□□ 0.58
PDLIM1P1-201ENST00000604187 IDI1Q13907 227 aa18.68■□□□□ 0.58
PDLIM1P1-201ENST00000604187 MSH6P52701 1360 aa18.68■□□□□ 0.58
PDLIM1P1-201ENST00000604187 JCADQ9P266 1359 aa18.68■□□□□ 0.58
PDLIM1P1-201ENST00000604187 KANK4Q5T7N3 995 aaPredicted RBP18.67■□□□□ 0.58
PDLIM1P1-201ENST00000604187 KANK1Q14678 1352 aa18.67■□□□□ 0.58
PDLIM1P1-201ENST00000604187 NKTRP30414 1462 aaKnown RBP18.66■□□□□ 0.58
PDLIM1P1-201ENST00000604187 SLAIN2Q9P270 581 aa18.66■□□□□ 0.58
PDLIM1P1-201ENST00000604187 VPS8Q8N3P4 1428 aa18.66■□□□□ 0.58
PDLIM1P1-201ENST00000604187 TET3O43151 1660 aa18.65■□□□□ 0.58
PDLIM1P1-201ENST00000604187 ABCC5O15440 1437 aa18.65■□□□□ 0.58
PDLIM1P1-201ENST00000604187 BCANQ96GW7 911 aa18.64■□□□□ 0.57
PDLIM1P1-201ENST00000604187 SETD1AO15047 1707 aaKnown RBP18.63■□□□□ 0.57
PDLIM1P1-201ENST00000604187 NWD1Q149M9 1564 aa18.62■□□□□ 0.57
PDLIM1P1-201ENST00000604187 LMTK2Q8IWU2 1503 aa18.6■□□□□ 0.57
PDLIM1P1-201ENST00000604187 ADGRB3O60242 1522 aa18.59■□□□□ 0.57
PDLIM1P1-201ENST00000604187 NOS1P29475 1434 aa18.59■□□□□ 0.57
PDLIM1P1-201ENST00000604187 MEX3CQ5U5Q3 659 aaKnown RBP18.59■□□□□ 0.57
PDLIM1P1-201ENST00000604187 LRP6O75581 1613 aa18.59■□□□□ 0.57
PDLIM1P1-201ENST00000604187 UPF1Q92900 1129 aaKnown RBP eCLIP18.58■□□□□ 0.56
PDLIM1P1-201ENST00000604187 DAPK1P53355 1430 aa18.57■□□□□ 0.56
PDLIM1P1-201ENST00000604187 TRIM52Q96A61 297 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms