RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 KIF15Q9NS87 1388 aa22.18■■□□□ 1.14
TUBE1-204ENST00000603621 DUOX2Q9NRD8 1548 aa22.17■■□□□ 1.14
TUBE1-204ENST00000603621 UHRF1BP1Q6BDS2 1440 aa22.16■■□□□ 1.14
TUBE1-204ENST00000603621 WASHC2CQ9Y4E1 1318 aa22.16■■□□□ 1.14
TUBE1-204ENST00000603621 EIF2AK4Q9P2K8 1649 aaKnown RBP22.15■■□□□ 1.14
TUBE1-204ENST00000603621 ANKRD30AQ9BXX3 1397 aa22.13■■□□□ 1.13
TUBE1-204ENST00000603621 KDM5DQ9BY66 1539 aa22.13■■□□□ 1.13
TUBE1-204ENST00000603621 RNF17Q9BXT8 1623 aaKnown RBP22.13■■□□□ 1.13
TUBE1-204ENST00000603621 ITGAEP38570 1179 aa22.1■■□□□ 1.13
TUBE1-204ENST00000603621 NPATQ14207 1427 aa22.1■■□□□ 1.13
TUBE1-204ENST00000603621 PTPRKQ15262 1439 aa22.1■■□□□ 1.13
TUBE1-204ENST00000603621 NCOA1Q15788 1441 aa22.08■■□□□ 1.13
TUBE1-204ENST00000603621 ERBINQ96RT1 1412 aa22.08■■□□□ 1.13
TUBE1-204ENST00000603621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.08■■□□□ 1.13
TUBE1-204ENST00000603621 CEP152O94986 1710 aa22.08■■□□□ 1.12
TUBE1-204ENST00000603621 CFAP65Q6ZU64 1925 aaKnown RBP22.08■■□□□ 1.12
TUBE1-204ENST00000603621 FAM135AQ9P2D6 1515 aa22.07■■□□□ 1.12
TUBE1-204ENST00000603621 FBXO31Q5XUX0 539 aaPredicted RBP22.07■■□□□ 1.12
TUBE1-204ENST00000603621 MROH1Q8NDA8 1641 aa22.06■■□□□ 1.12
TUBE1-204ENST00000603621 ADGRL2O95490 1459 aa22.06■■□□□ 1.12
TUBE1-204ENST00000603621 ABCC3O15438 1527 aa22.05■■□□□ 1.12
TUBE1-204ENST00000603621 ZC3H13Q5T200 1668 aaKnown RBP22.04■■□□□ 1.12
TUBE1-204ENST00000603621 MYO3AQ8NEV4 1616 aa22.04■■□□□ 1.12
TUBE1-204ENST00000603621 PZPP20742 1482 aa22.03■■□□□ 1.12
TUBE1-204ENST00000603621 STRCQ7RTU9 1775 aa22■■□□□ 1.11
TUBE1-204ENST00000603621 CAMSAP1Q5T5Y3 1602 aa22■■□□□ 1.11
TUBE1-204ENST00000603621 TNRQ92752 1358 aa21.99■■□□□ 1.11
TUBE1-204ENST00000603621 DEPDC5O75140 1603 aa21.99■■□□□ 1.11
TUBE1-204ENST00000603621 PRDM15P57071 1507 aaPredicted RBP21.99■■□□□ 1.11
TUBE1-204ENST00000603621 KANK1Q14678 1352 aa21.99■■□□□ 1.11
TUBE1-204ENST00000603621 CEP170BQ9Y4F5 1589 aaPredicted RBP21.98■■□□□ 1.11
TUBE1-204ENST00000603621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.98■■□□□ 1.11
TUBE1-204ENST00000603621 ZNF142P52746 1687 aaPredicted RBP21.98■■□□□ 1.11
TUBE1-204ENST00000603621 ANKRD50Q9ULJ7 1429 aa21.97■■□□□ 1.11
TUBE1-204ENST00000603621 RRBP1Q9P2E9 1410 aaKnown RBP21.95■■□□□ 1.1
TUBE1-204ENST00000603621 A2ML1A8K2U0 1454 aa21.93■■□□□ 1.1
TUBE1-204ENST00000603621 ROCK1Q13464 1354 aa21.93■■□□□ 1.1
TUBE1-204ENST00000603621 DMRT2Q9Y5R5 561 aa21.91■■□□□ 1.1
TUBE1-204ENST00000603621 ERVK-7P63135 1459 aa21.9■■□□□ 1.1
TUBE1-204ENST00000603621 NCKAP5LQ9HCH0 1330 aa21.9■■□□□ 1.1
TUBE1-204ENST00000603621 SPATA31D1Q6ZQQ2 1576 aa21.9■■□□□ 1.1
TUBE1-204ENST00000603621 VWDEQ8N2E2 1590 aa21.88■■□□□ 1.09
TUBE1-204ENST00000603621 NLRP1Q9C000 1473 aa21.87■■□□□ 1.09
TUBE1-204ENST00000603621 ARHGAP31Q2M1Z3 1444 aa21.87■■□□□ 1.09
TUBE1-204ENST00000603621 LMTK2Q8IWU2 1503 aa21.85■■□□□ 1.09
TUBE1-204ENST00000603621 UGGT1Q9NYU2 1555 aa21.85■■□□□ 1.09
TUBE1-204ENST00000603621 PLA2R1Q13018 1463 aa21.83■■□□□ 1.09
TUBE1-204ENST00000603621 UNC13BO14795 1591 aa21.83■■□□□ 1.09
TUBE1-204ENST00000603621 PTPRTO14522 1441 aa21.82■■□□□ 1.08
TUBE1-204ENST00000603621 EFCAB6Q5THR3 1501 aa21.82■■□□□ 1.08
TUBE1-204ENST00000603621 THEMISQ8N1K5 641 aaPredicted RBP21.82■■□□□ 1.08
TUBE1-204ENST00000603621 PKD2Q13563 968 aa21.81■■□□□ 1.08
TUBE1-204ENST00000603621 POLR1AO95602 1720 aaPredicted RBP21.8■■□□□ 1.08
TUBE1-204ENST00000603621 TET3O43151 1660 aa21.79■■□□□ 1.08
TUBE1-204ENST00000603621 NUP155O75694 1391 aa21.78■■□□□ 1.08
TUBE1-204ENST00000603621 GCC2Q8IWJ2 1684 aa21.78■■□□□ 1.08
TUBE1-204ENST00000603621 UBR1Q8IWV7 1749 aa21.77■■□□□ 1.08
TUBE1-204ENST00000603621 ILDR1Q86SU0 546 aaPredicted RBP21.76■■□□□ 1.07
TUBE1-204ENST00000603621 ANKLE2Q86XL3 938 aa21.76■■□□□ 1.07
TUBE1-204ENST00000603621 STAG3Q9UJ98 1225 aa21.76■■□□□ 1.07
TUBE1-204ENST00000603621 PIK3C2BO00750 1634 aa21.76■■□□□ 1.07
TUBE1-204ENST00000603621 IQGAP3Q86VI3 1631 aa21.76■■□□□ 1.07
TUBE1-204ENST00000603621 SYNMO15061 1565 aa21.74■■□□□ 1.07
TUBE1-204ENST00000603621 NAIPQ13075 1403 aa21.74■■□□□ 1.07
TUBE1-204ENST00000603621 E9PCH4 1651 aa21.73■■□□□ 1.07
TUBE1-204ENST00000603621 IDI1Q13907 227 aa21.73■■□□□ 1.07
TUBE1-204ENST00000603621 CERKQ8TCT0 537 aa21.73■■□□□ 1.07
TUBE1-204ENST00000603621 NOS1P29475 1434 aa21.72■■□□□ 1.07
TUBE1-204ENST00000603621 RPRD2Q5VT52 1461 aaKnown RBP21.71■■□□□ 1.07
TUBE1-204ENST00000603621 NEURL4Q96JN8 1562 aa21.71■■□□□ 1.07
TUBE1-204ENST00000603621 TRIM52Q96A61 297 aa21.68■■□□□ 1.06
TUBE1-204ENST00000603621 ZNF335Q9H4Z2 1342 aaPredicted RBP21.68■■□□□ 1.06
TUBE1-204ENST00000603621 HFM1A2PYH4 1435 aa21.68■■□□□ 1.06
TUBE1-204ENST00000603621 NPHP4O75161 1426 aaPredicted RBP21.67■■□□□ 1.06
TUBE1-204ENST00000603621 SLC52A1Q9NWF4 448 aa21.67■■□□□ 1.06
TUBE1-204ENST00000603621 FBXO41Q8TF61 875 aa21.66■■□□□ 1.06
TUBE1-204ENST00000603621 MYO5BQ9ULV0 1848 aa21.66■■□□□ 1.06
TUBE1-204ENST00000603621 TXNDC2Q86VQ3 553 aa21.65■■□□□ 1.06
TUBE1-204ENST00000603621 IQGAP1P46940 1657 aa21.65■■□□□ 1.06
TUBE1-204ENST00000603621 LTBP4Q8N2S1 1624 aa21.65■■□□□ 1.06
TUBE1-204ENST00000603621 CHGAP10645 457 aaKnown RBP21.64■■□□□ 1.05
TUBE1-204ENST00000603621 LTKP29376 864 aa21.64■■□□□ 1.05
TUBE1-204ENST00000603621 EID1Q9Y6B2 187 aa21.64■■□□□ 1.05
TUBE1-204ENST00000603621 KDM5AP29375 1690 aaKnown RBP21.63■■□□□ 1.05
TUBE1-204ENST00000603621 SLIT1O75093 1534 aa21.63■■□□□ 1.05
TUBE1-204ENST00000603621 MED14O60244 1454 aa21.63■■□□□ 1.05
TUBE1-204ENST00000603621 ADGRB3O60242 1522 aa21.62■■□□□ 1.05
TUBE1-204ENST00000603621 SCAF11Q99590 1463 aaKnown RBP21.62■■□□□ 1.05
TUBE1-204ENST00000603621 ARHGAP23Q9P227 1491 aa21.62■■□□□ 1.05
TUBE1-204ENST00000603621 TMEM2Q9UHN6 1383 aa21.61■■□□□ 1.05
TUBE1-204ENST00000603621 SPHKAPQ2M3C7 1700 aa21.6■■□□□ 1.05
TUBE1-204ENST00000603621 SENP3Q9H4L4 574 aaPredicted RBP21.57■■□□□ 1.04
TUBE1-204ENST00000603621 TMEM131LA2VDJ0 1609 aa21.56■■□□□ 1.04
TUBE1-204ENST00000603621 SLC4A1APQ9BWU0 796 aaKnown RBP21.55■■□□□ 1.04
TUBE1-204ENST00000603621 BCANQ96GW7 911 aa21.54■■□□□ 1.04
TUBE1-204ENST00000603621 PPP1R15AO75807 674 aaPredicted RBP21.52■■□□□ 1.04
TUBE1-204ENST00000603621 NUTM2DQ5VT03 806 aaPredicted RBP21.51■■□□□ 1.03
TUBE1-204ENST00000603621 RIMS2Q9UQ26 1411 aa21.51■■□□□ 1.03
TUBE1-204ENST00000603621 SETD5Q9C0A6 1442 aa21.5■■□□□ 1.03
TUBE1-204ENST00000603621 STRCP1A6NGW2 1772 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms