RNA–Protein interactions for RNA: ENST00000602775.5

SRA1-205, Transcript of steroid receptor RNA activator 1, humanhuman

TSL 1 (best)

Gene SRA1, Length 1,466 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRA1-205ENST00000602775 TNRQ92752 1358 aa24.13■■□□□ 1.45
SRA1-205ENST00000602775 CPS1P31327 1500 aa24.12■■□□□ 1.45
SRA1-205ENST00000602775 SHANK2Q9UPX8 1470 aa24.12■■□□□ 1.45
SRA1-205ENST00000602775 POLR1AO95602 1720 aaPredicted RBP24.11■■□□□ 1.45
SRA1-205ENST00000602775 DHX29Q7Z478 1369 aaKnown RBP24.1■■□□□ 1.45
SRA1-205ENST00000602775 MBD5Q9P267 1494 aa24.1■■□□□ 1.45
SRA1-205ENST00000602775 TIAM1Q13009 1591 aa24.08■■□□□ 1.45
SRA1-205ENST00000602775 KIF3BO15066 747 aa24.07■■□□□ 1.44
SRA1-205ENST00000602775 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.07■■□□□ 1.44
SRA1-205ENST00000602775 RTEL1-TNFRSF6BF6WH68 1400 aa24.07■■□□□ 1.44
SRA1-205ENST00000602775 ANKLE2Q86XL3 938 aa24.06■■□□□ 1.44
SRA1-205ENST00000602775 PZPP20742 1482 aa24.05■■□□□ 1.44
SRA1-205ENST00000602775 PHF23Q9BUL5 403 aaPredicted RBP24.04■■□□□ 1.44
SRA1-205ENST00000602775 VWDEQ8N2E2 1590 aa24.04■■□□□ 1.44
SRA1-205ENST00000602775 KDM5DQ9BY66 1539 aa24.03■■□□□ 1.44
SRA1-205ENST00000602775 SENP3Q9H4L4 574 aaPredicted RBP24.02■■□□□ 1.44
SRA1-205ENST00000602775 WASHC2CQ9Y4E1 1318 aa24.01■■□□□ 1.43
SRA1-205ENST00000602775 ALKQ9UM73 1620 aa24.01■■□□□ 1.43
SRA1-205ENST00000602775 THEMISQ8N1K5 641 aaPredicted RBP24■■□□□ 1.43
SRA1-205ENST00000602775 NPHP4O75161 1426 aaPredicted RBP24■■□□□ 1.43
SRA1-205ENST00000602775 MIA2Q96PC5 1412 aa23.99■■□□□ 1.43
SRA1-205ENST00000602775 EHBP1L1Q8N3D4 1523 aa23.99■■□□□ 1.43
SRA1-205ENST00000602775 UGGT1Q9NYU2 1555 aa23.98■■□□□ 1.43
SRA1-205ENST00000602775 CCDC141Q6ZP82 1450 aa23.96■■□□□ 1.43
SRA1-205ENST00000602775 NLRP1Q9C000 1473 aa23.96■■□□□ 1.43
SRA1-205ENST00000602775 FAM135AQ9P2D6 1515 aa23.96■■□□□ 1.43
SRA1-205ENST00000602775 MED14O60244 1454 aa23.96■■□□□ 1.43
SRA1-205ENST00000602775 CEP162Q5TB80 1403 aa23.95■■□□□ 1.42
SRA1-205ENST00000602775 DEPDC5O75140 1603 aa23.93■■□□□ 1.42
SRA1-205ENST00000602775 CAMSAP2Q08AD1 1489 aa23.93■■□□□ 1.42
SRA1-205ENST00000602775 IQGAP1P46940 1657 aa23.9■■□□□ 1.42
SRA1-205ENST00000602775 LRRC7Q96NW7 1537 aa23.89■■□□□ 1.42
SRA1-205ENST00000602775 STRCP1A6NGW2 1772 aa23.89■■□□□ 1.41
SRA1-205ENST00000602775 RSPH4AQ5TD94 716 aa23.87■■□□□ 1.41
SRA1-205ENST00000602775 NCOA2Q15596 1464 aa23.86■■□□□ 1.41
SRA1-205ENST00000602775 RNF17Q9BXT8 1623 aaKnown RBP23.85■■□□□ 1.41
SRA1-205ENST00000602775 TSPY4P0CV99 314 aa23.83■■□□□ 1.41
SRA1-205ENST00000602775 TSPY10P0CW01 314 aa23.83■■□□□ 1.41
SRA1-205ENST00000602775 ABCC3O15438 1527 aa23.82■■□□□ 1.4
SRA1-205ENST00000602775 SYNMO15061 1565 aa23.82■■□□□ 1.4
SRA1-205ENST00000602775 ARHGEF5Q12774 1597 aa23.8■■□□□ 1.4
SRA1-205ENST00000602775 ERVK-7P63135 1459 aa23.8■■□□□ 1.4
SRA1-205ENST00000602775 RGS17Q9UGC6 210 aaPredicted RBP23.79■■□□□ 1.4
SRA1-205ENST00000602775 ZC3H13Q5T200 1668 aaKnown RBP23.77■■□□□ 1.4
SRA1-205ENST00000602775 SCAF11Q99590 1463 aaKnown RBP23.74■■□□□ 1.39
SRA1-205ENST00000602775 UBR1Q8IWV7 1749 aa23.73■■□□□ 1.39
SRA1-205ENST00000602775 LTKP29376 864 aa23.73■■□□□ 1.39
SRA1-205ENST00000602775 MROH1Q8NDA8 1641 aa23.71■■□□□ 1.39
SRA1-205ENST00000602775 TXNDC2Q86VQ3 553 aa23.71■■□□□ 1.39
SRA1-205ENST00000602775 CEP152O94986 1710 aa23.7■■□□□ 1.39
SRA1-205ENST00000602775 MAST1Q9Y2H9 1570 aa23.69■■□□□ 1.38
SRA1-205ENST00000602775 EIF2AK4Q9P2K8 1649 aaKnown RBP23.69■■□□□ 1.38
SRA1-205ENST00000602775 ARHGAP23Q9P227 1491 aa23.68■■□□□ 1.38
SRA1-205ENST00000602775 CFAP65Q6ZU64 1925 aaKnown RBP23.67■■□□□ 1.38
SRA1-205ENST00000602775 XIRP1Q702N8 1843 aaKnown RBP23.67■■□□□ 1.38
SRA1-205ENST00000602775 SLIT1O75093 1534 aa23.66■■□□□ 1.38
SRA1-205ENST00000602775 POTEAQ6S8J7 498 aa23.64■■□□□ 1.38
SRA1-205ENST00000602775 EID1Q9Y6B2 187 aa23.64■■□□□ 1.38
SRA1-205ENST00000602775 LOC105371045A0A1W2PR82 267 aa23.63■■□□□ 1.37
SRA1-205ENST00000602775 FAM135BQ49AJ0 1406 aa23.62■■□□□ 1.37
SRA1-205ENST00000602775 LRRC9Q6ZRR7 1453 aa23.6■■□□□ 1.37
SRA1-205ENST00000602775 TMEM94Q12767 1356 aa23.59■■□□□ 1.37
SRA1-205ENST00000602775 DUOX2Q9NRD8 1548 aa23.59■■□□□ 1.37
SRA1-205ENST00000602775 ARHGAP31Q2M1Z3 1444 aa23.58■■□□□ 1.37
SRA1-205ENST00000602775 TMEM2Q9UHN6 1383 aa23.57■■□□□ 1.36
SRA1-205ENST00000602775 RBM33Q96EV2 1170 aaKnown RBP23.57■■□□□ 1.36
SRA1-205ENST00000602775 STAG3Q9UJ98 1225 aa23.57■■□□□ 1.36
SRA1-205ENST00000602775 PIK3C2BO00750 1634 aa23.57■■□□□ 1.36
SRA1-205ENST00000602775 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.56■■□□□ 1.36
SRA1-205ENST00000602775 PRDM15P57071 1507 aaPredicted RBP23.55■■□□□ 1.36
SRA1-205ENST00000602775 KANK4Q5T7N3 995 aaPredicted RBP23.55■■□□□ 1.36
SRA1-205ENST00000602775 ROBO1Q9Y6N7 1651 aa23.54■■□□□ 1.36
SRA1-205ENST00000602775 MYOM3Q5VTT5 1437 aa23.54■■□□□ 1.36
SRA1-205ENST00000602775 KIF15Q9NS87 1388 aa23.53■■□□□ 1.36
SRA1-205ENST00000602775 KCNA6P17658 529 aa23.53■■□□□ 1.36
SRA1-205ENST00000602775 PROSER2Q86WR7 435 aaPredicted RBP23.53■■□□□ 1.36
SRA1-205ENST00000602775 SLC26A8Q96RN1 970 aa23.53■■□□□ 1.36
SRA1-205ENST00000602775 RRP7BPQ9NSQ0 103 aa23.52■■□□□ 1.36
SRA1-205ENST00000602775 MAP3K1Q13233 1512 aa23.52■■□□□ 1.36
SRA1-205ENST00000602775 ERBINQ96RT1 1412 aa23.5■■□□□ 1.35
SRA1-205ENST00000602775 EFCAB6Q5THR3 1501 aa23.5■■□□□ 1.35
SRA1-205ENST00000602775 VPS8Q8N3P4 1428 aa23.49■■□□□ 1.35
SRA1-205ENST00000602775 IDI1Q13907 227 aa23.49■■□□□ 1.35
SRA1-205ENST00000602775 TET3O43151 1660 aa23.46■■□□□ 1.35
SRA1-205ENST00000602775 SETD1AO15047 1707 aaKnown RBP23.45■■□□□ 1.35
SRA1-205ENST00000602775 KANK1Q14678 1352 aa23.45■■□□□ 1.35
SRA1-205ENST00000602775 ABCC5O15440 1437 aa23.45■■□□□ 1.34
SRA1-205ENST00000602775 BCANQ96GW7 911 aa23.43■■□□□ 1.34
SRA1-205ENST00000602775 CROCC2H7BZ55 1655 aa23.42■■□□□ 1.34
SRA1-205ENST00000602775 MSH6P52701 1360 aa23.42■■□□□ 1.34
SRA1-205ENST00000602775 KDM5AP29375 1690 aaKnown RBP23.42■■□□□ 1.34
SRA1-205ENST00000602775 NKTRP30414 1462 aaKnown RBP23.41■■□□□ 1.34
SRA1-205ENST00000602775 NWD1Q149M9 1564 aa23.41■■□□□ 1.34
SRA1-205ENST00000602775 PHLPP1O60346 1717 aa23.4■■□□□ 1.34
SRA1-205ENST00000602775 SLAIN2Q9P270 581 aa23.4■■□□□ 1.34
SRA1-205ENST00000602775 JCADQ9P266 1359 aa23.39■■□□□ 1.33
SRA1-205ENST00000602775 LMTK2Q8IWU2 1503 aa23.39■■□□□ 1.33
SRA1-205ENST00000602775 DAPK1P53355 1430 aa23.38■■□□□ 1.33
SRA1-205ENST00000602775 ADGRB3O60242 1522 aa23.38■■□□□ 1.33
SRA1-205ENST00000602775 CHIC2Q9UKJ5 165 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms