RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 TRIM52Q96A61 297 aa16.55■□□□□ 0.24
MIA-RAB4B-201ENST00000600729 TIAM1Q13009 1591 aa16.53■□□□□ 0.24
MIA-RAB4B-201ENST00000600729 MYT1LQ9UL68 1186 aa16.53■□□□□ 0.24
MIA-RAB4B-201ENST00000600729 ATP7AQ04656 1500 aa16.53■□□□□ 0.24
MIA-RAB4B-201ENST00000600729 CLTCQ00610 1675 aaKnown RBP16.53■□□□□ 0.24
MIA-RAB4B-201ENST00000600729 ZMYM3Q14202 1370 aa16.5■□□□□ 0.23
MIA-RAB4B-201ENST00000600729 XIRP1Q702N8 1843 aaKnown RBP16.49■□□□□ 0.23
MIA-RAB4B-201ENST00000600729 HNRNPMP52272 730 aaKnown RBP eCLIP16.49■□□□□ 0.23
MIA-RAB4B-201ENST00000600729 ZNF777Q9ULD5 760 aaPredicted RBP16.49■□□□□ 0.23
MIA-RAB4B-201ENST00000600729 ADGBQ8N7X0 1667 aa16.48■□□□□ 0.23
MIA-RAB4B-201ENST00000600729 A2ML1A8K2U0 1454 aa16.48■□□□□ 0.23
MIA-RAB4B-201ENST00000600729 KIAA1107Q9UPP5 1409 aa16.46■□□□□ 0.23
MIA-RAB4B-201ENST00000600729 EHBP1L1Q8N3D4 1523 aa16.45■□□□□ 0.22
MIA-RAB4B-201ENST00000600729 A2MP01023 1474 aa16.45■□□□□ 0.22
MIA-RAB4B-201ENST00000600729 SPAG9O60271 1321 aaKnown RBP16.45■□□□□ 0.22
MIA-RAB4B-201ENST00000600729 ZNF644Q9H582 1327 aaPredicted RBP16.45■□□□□ 0.22
MIA-RAB4B-201ENST00000600729 IQGAP1P46940 1657 aa16.44■□□□□ 0.22
MIA-RAB4B-201ENST00000600729 CDK12Q9NYV4 1490 aaPredicted RBP16.44■□□□□ 0.22
MIA-RAB4B-201ENST00000600729 MBD5Q9P267 1494 aa16.44■□□□□ 0.22
MIA-RAB4B-201ENST00000600729 RBM33Q96EV2 1170 aaKnown RBP16.44■□□□□ 0.22
MIA-RAB4B-201ENST00000600729 ROBO1Q9Y6N7 1651 aa16.43■□□□□ 0.22
MIA-RAB4B-201ENST00000600729 ZRANB1Q9UGI0 708 aa16.43■□□□□ 0.22
MIA-RAB4B-201ENST00000600729 PLEKHH2Q8IVE3 1493 aa16.42■□□□□ 0.22
MIA-RAB4B-201ENST00000600729 CCNB3Q8WWL7 1395 aa16.42■□□□□ 0.22
MIA-RAB4B-201ENST00000600729 FAM135BQ49AJ0 1406 aa16.42■□□□□ 0.22
MIA-RAB4B-201ENST00000600729 DEPDC5O75140 1603 aa16.41■□□□□ 0.22
MIA-RAB4B-201ENST00000600729 MTUS2Q5JR59 1369 aa16.41■□□□□ 0.22
MIA-RAB4B-201ENST00000600729 EP400Q96L91 3159 aa16.41■□□□□ 0.22
MIA-RAB4B-201ENST00000600729 CFDP1Q9UEE9 299 aaPredicted RBP16.4■□□□□ 0.22
MIA-RAB4B-201ENST00000600729 LRP5O75197 1615 aa16.4■□□□□ 0.22
MIA-RAB4B-201ENST00000600729 CEP162Q5TB80 1403 aa16.39■□□□□ 0.21
MIA-RAB4B-201ENST00000600729 MED14O60244 1454 aa16.38■□□□□ 0.21
MIA-RAB4B-201ENST00000600729 PHLPP1O60346 1717 aa16.38■□□□□ 0.21
MIA-RAB4B-201ENST00000600729 NPHP4O75161 1426 aaPredicted RBP16.37■□□□□ 0.21
MIA-RAB4B-201ENST00000600729 ZNF772Q68DY9 489 aaPredicted RBP16.37■□□□□ 0.21
MIA-RAB4B-201ENST00000600729 LRP6O75581 1613 aa16.37■□□□□ 0.21
MIA-RAB4B-201ENST00000600729 NCOA2Q15596 1464 aa16.35■□□□□ 0.21
MIA-RAB4B-201ENST00000600729 CAMSAP2Q08AD1 1489 aa16.35■□□□□ 0.21
MIA-RAB4B-201ENST00000600729 RXRBP28702 533 aa16.34■□□□□ 0.21
MIA-RAB4B-201ENST00000600729 FOXD1Q16676 465 aa16.34■□□□□ 0.21
MIA-RAB4B-201ENST00000600729 RTEL1-TNFRSF6BF6WH68 1400 aa16.32■□□□□ 0.2
MIA-RAB4B-201ENST00000600729 GGT6Q6P531 493 aa16.32■□□□□ 0.2
MIA-RAB4B-201ENST00000600729 CCDC141Q6ZP82 1450 aa16.31■□□□□ 0.2
MIA-RAB4B-201ENST00000600729 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.31■□□□□ 0.2
MIA-RAB4B-201ENST00000600729 JCADQ9P266 1359 aa16.31■□□□□ 0.2
MIA-RAB4B-201ENST00000600729 ZC3H13Q5T200 1668 aaKnown RBP16.3■□□□□ 0.2
MIA-RAB4B-201ENST00000600729 ANKLE2Q86XL3 938 aa16.3■□□□□ 0.2
MIA-RAB4B-201ENST00000600729 RGS12O14924 1447 aa16.29■□□□□ 0.2
MIA-RAB4B-201ENST00000600729 DHX29Q7Z478 1369 aaKnown RBP16.29■□□□□ 0.2
MIA-RAB4B-201ENST00000600729 ARHGEF5Q12774 1597 aa16.29■□□□□ 0.2
MIA-RAB4B-201ENST00000600729 KDM5DQ9BY66 1539 aa16.27■□□□□ 0.2
MIA-RAB4B-201ENST00000600729 COL16A1Q07092 1604 aaPredicted RBP16.26■□□□□ 0.19
MIA-RAB4B-201ENST00000600729 PZPP20742 1482 aa16.25■□□□□ 0.19
MIA-RAB4B-201ENST00000600729 MEX3CQ5U5Q3 659 aaKnown RBP16.25■□□□□ 0.19
MIA-RAB4B-201ENST00000600729 MROH1Q8NDA8 1641 aa16.25■□□□□ 0.19
MIA-RAB4B-201ENST00000600729 LRRC9Q6ZRR7 1453 aa16.24■□□□□ 0.19
MIA-RAB4B-201ENST00000600729 FBXO31Q5XUX0 539 aaPredicted RBP16.24■□□□□ 0.19
MIA-RAB4B-201ENST00000600729 MAST1Q9Y2H9 1570 aa16.23■□□□□ 0.19
MIA-RAB4B-201ENST00000600729 FAM135AQ9P2D6 1515 aa16.23■□□□□ 0.19
MIA-RAB4B-201ENST00000600729 KIF3BO15066 747 aa16.22■□□□□ 0.19
MIA-RAB4B-201ENST00000600729 CEP152O94986 1710 aa16.22■□□□□ 0.19
MIA-RAB4B-201ENST00000600729 SHPRHQ149N8 1683 aa16.21■□□□□ 0.19
MIA-RAB4B-201ENST00000600729 VPS8Q8N3P4 1428 aa16.21■□□□□ 0.19
MIA-RAB4B-201ENST00000600729 NUTM2BA6NNL0 878 aaPredicted RBP16.2■□□□□ 0.18
MIA-RAB4B-201ENST00000600729 NUTM2EB1AL46 878 aaPredicted RBP16.2■□□□□ 0.18
MIA-RAB4B-201ENST00000600729 NUTM2DQ5VT03 806 aaPredicted RBP16.2■□□□□ 0.18
MIA-RAB4B-201ENST00000600729 NUTM2AQ8IVF1 878 aaPredicted RBP16.2■□□□□ 0.18
MIA-RAB4B-201ENST00000600729 TNRQ92752 1358 aa16.2■□□□□ 0.18
MIA-RAB4B-201ENST00000600729 SPATA31A6Q5VVP1 1343 aa16.19■□□□□ 0.18
MIA-RAB4B-201ENST00000600729 ABCC3O15438 1527 aa16.19■□□□□ 0.18
MIA-RAB4B-201ENST00000600729 UGGT1Q9NYU2 1555 aa16.19■□□□□ 0.18
MIA-RAB4B-201ENST00000600729 ATAD2Q6PL18 1390 aa16.19■□□□□ 0.18
MIA-RAB4B-201ENST00000600729 LOC105371045A0A1W2PR82 267 aa16.19■□□□□ 0.18
MIA-RAB4B-201ENST00000600729 CFAP65Q6ZU64 1925 aaKnown RBP16.18■□□□□ 0.18
MIA-RAB4B-201ENST00000600729 KANK4Q5T7N3 995 aaPredicted RBP16.18■□□□□ 0.18
MIA-RAB4B-201ENST00000600729 EIF2AK4Q9P2K8 1649 aaKnown RBP16.18■□□□□ 0.18
MIA-RAB4B-201ENST00000600729 YY1P25490 414 aa16.17■□□□□ 0.18
MIA-RAB4B-201ENST00000600729 CROCC2H7BZ55 1655 aa16.17■□□□□ 0.18
MIA-RAB4B-201ENST00000600729 CEP350Q5VT06 3117 aa16.14■□□□□ 0.18
MIA-RAB4B-201ENST00000600729 FGD6Q6ZV73 1430 aa16.14■□□□□ 0.17
MIA-RAB4B-201ENST00000600729 MIA2Q96PC5 1412 aa16.14■□□□□ 0.17
MIA-RAB4B-201ENST00000600729 THEMISQ8N1K5 641 aaPredicted RBP16.14■□□□□ 0.17
MIA-RAB4B-201ENST00000600729 NHSL1Q5SYE7 1610 aa16.14■□□□□ 0.17
MIA-RAB4B-201ENST00000600729 MAP3K1Q13233 1512 aa16.14■□□□□ 0.17
MIA-RAB4B-201ENST00000600729 UBR1Q8IWV7 1749 aa16.14■□□□□ 0.17
MIA-RAB4B-201ENST00000600729 MYOM3Q5VTT5 1437 aa16.12■□□□□ 0.17
MIA-RAB4B-201ENST00000600729 ERVK-7P63135 1459 aa16.12■□□□□ 0.17
MIA-RAB4B-201ENST00000600729 NLRP1Q9C000 1473 aa16.12■□□□□ 0.17
MIA-RAB4B-201ENST00000600729 WASHC2CQ9Y4E1 1318 aa16.12■□□□□ 0.17
MIA-RAB4B-201ENST00000600729 RSPH4AQ5TD94 716 aa16.11■□□□□ 0.17
MIA-RAB4B-201ENST00000600729 AFF2P51816 1311 aa16.1■□□□□ 0.17
MIA-RAB4B-201ENST00000600729 TMEM94Q12767 1356 aa16.09■□□□□ 0.17
MIA-RAB4B-201ENST00000600729 PRDM15P57071 1507 aaPredicted RBP16.09■□□□□ 0.17
MIA-RAB4B-201ENST00000600729 PTPN23Q9H3S7 1636 aa16.08■□□□□ 0.17
MIA-RAB4B-201ENST00000600729 RBM6P78332 1123 aaKnown RBP16.08■□□□□ 0.16
MIA-RAB4B-201ENST00000600729 DUOX2Q9NRD8 1548 aa16.08■□□□□ 0.16
MIA-RAB4B-201ENST00000600729 TSPY4P0CV99 314 aa16.07■□□□□ 0.16
MIA-RAB4B-201ENST00000600729 TSPY10P0CW01 314 aa16.07■□□□□ 0.16
MIA-RAB4B-201ENST00000600729 NWD1Q149M9 1564 aa16.07■□□□□ 0.16
MIA-RAB4B-201ENST00000600729 ABCC5O15440 1437 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms