RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 PLPPR3Q6T4P5 718 aa24.36■■□□□ 1.49
RPS28-203ENST00000600659 NCOA1Q15788 1441 aa24.36■■□□□ 1.49
RPS28-203ENST00000600659 KDM5DQ9BY66 1539 aa24.35■■□□□ 1.49
RPS28-203ENST00000600659 FAM50AQ14320 339 aaKnown RBP24.35■■□□□ 1.49
RPS28-203ENST00000600659 ERBINQ96RT1 1412 aa24.34■■□□□ 1.49
RPS28-203ENST00000600659 DEPDC5O75140 1603 aa24.33■■□□□ 1.49
RPS28-203ENST00000600659 ZMYM3Q14202 1370 aa24.33■■□□□ 1.49
RPS28-203ENST00000600659 RRBP1Q9P2E9 1410 aaKnown RBP24.33■■□□□ 1.49
RPS28-203ENST00000600659 PPP6R1Q9UPN7 881 aa24.33■■□□□ 1.48
RPS28-203ENST00000600659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.32■■□□□ 1.486e-8■■■■□ 21.9
RPS28-203ENST00000600659 PRDM15P57071 1507 aaPredicted RBP24.31■■□□□ 1.48
RPS28-203ENST00000600659 ZC3H13Q5T200 1668 aaKnown RBP24.31■■□□□ 1.48
RPS28-203ENST00000600659 CHIC2Q9UKJ5 165 aa24.31■■□□□ 1.48
RPS28-203ENST00000600659 ANKRD30AQ9BXX3 1397 aa24.31■■□□□ 1.48
RPS28-203ENST00000600659 RRP7BPQ9NSQ0 103 aa24.3■■□□□ 1.48
RPS28-203ENST00000600659 ABCC3O15438 1527 aa24.3■■□□□ 1.48
RPS28-203ENST00000600659 CEP152O94986 1710 aa24.29■■□□□ 1.48
RPS28-203ENST00000600659 ESF1Q9H501 851 aaKnown RBP24.29■■□□□ 1.48
RPS28-203ENST00000600659 NPATQ14207 1427 aa24.28■■□□□ 1.48
RPS28-203ENST00000600659 MYO3AQ8NEV4 1616 aa24.24■■□□□ 1.47
RPS28-203ENST00000600659 PZPP20742 1482 aa24.24■■□□□ 1.47
RPS28-203ENST00000600659 VWDEQ8N2E2 1590 aa24.23■■□□□ 1.47
RPS28-203ENST00000600659 ZNF142P52746 1687 aaPredicted RBP24.23■■□□□ 1.47
RPS28-203ENST00000600659 CAMSAP1Q5T5Y3 1602 aa24.23■■□□□ 1.47
RPS28-203ENST00000600659 UHRF1BP1Q6BDS2 1440 aa24.23■■□□□ 1.47
RPS28-203ENST00000600659 ROCK1Q13464 1354 aa24.22■■□□□ 1.47
RPS28-203ENST00000600659 HSPA2P54652 639 aa24.2■■□□□ 1.46
RPS28-203ENST00000600659 WASHC2CQ9Y4E1 1318 aa24.2■■□□□ 1.46
RPS28-203ENST00000600659 ANKRD50Q9ULJ7 1429 aa24.18■■□□□ 1.46
RPS28-203ENST00000600659 STRCQ7RTU9 1775 aa24.16■■□□□ 1.46
RPS28-203ENST00000600659 UNC13BO14795 1591 aa24.16■■□□□ 1.46
RPS28-203ENST00000600659 LMTK2Q8IWU2 1503 aa24.15■■□□□ 1.46
RPS28-203ENST00000600659 SPATA31D1Q6ZQQ2 1576 aa24.15■■□□□ 1.46
RPS28-203ENST00000600659 CEP170BQ9Y4F5 1589 aaPredicted RBP24.15■■□□□ 1.46
RPS28-203ENST00000600659 FBXO31Q5XUX0 539 aaPredicted RBP24.13■■□□□ 1.45
RPS28-203ENST00000600659 CFAP65Q6ZU64 1925 aaKnown RBP24.12■■□□□ 1.45
RPS28-203ENST00000600659 ERVK-7P63135 1459 aa24.11■■□□□ 1.45
RPS28-203ENST00000600659 ARHGAP31Q2M1Z3 1444 aa24.11■■□□□ 1.45
RPS28-203ENST00000600659 ITGAEP38570 1179 aa24.1■■□□□ 1.45
RPS28-203ENST00000600659 TNRQ92752 1358 aa24.09■■□□□ 1.45
RPS28-203ENST00000600659 GCC2Q8IWJ2 1684 aa24.09■■□□□ 1.45
RPS28-203ENST00000600659 EFCAB6Q5THR3 1501 aa24.08■■□□□ 1.45
RPS28-203ENST00000600659 A2ML1A8K2U0 1454 aa24.07■■□□□ 1.44
RPS28-203ENST00000600659 TET3O43151 1660 aa24.05■■□□□ 1.44
RPS28-203ENST00000600659 IQGAP3Q86VI3 1631 aa24.05■■□□□ 1.44
RPS28-203ENST00000600659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.05■■□□□ 1.44
RPS28-203ENST00000600659 NAIPQ13075 1403 aa24.03■■□□□ 1.44
RPS28-203ENST00000600659 KANK1Q14678 1352 aa24.03■■□□□ 1.44
RPS28-203ENST00000600659 NLRP1Q9C000 1473 aa24.02■■□□□ 1.44
RPS28-203ENST00000600659 PLA2R1Q13018 1463 aa24.01■■□□□ 1.43
RPS28-203ENST00000600659 SYNMO15061 1565 aa23.99■■□□□ 1.43
RPS28-203ENST00000600659 E9PCH4 1651 aa23.98■■□□□ 1.43
RPS28-203ENST00000600659 HFM1A2PYH4 1435 aa23.98■■□□□ 1.43
RPS28-203ENST00000600659 NOS1P29475 1434 aa23.97■■□□□ 1.43
RPS28-203ENST00000600659 UBR1Q8IWV7 1749 aa23.97■■□□□ 1.43
RPS28-203ENST00000600659 UGGT1Q9NYU2 1555 aa23.96■■□□□ 1.43
RPS28-203ENST00000600659 RPRD2Q5VT52 1461 aaKnown RBP23.96■■□□□ 1.43
RPS28-203ENST00000600659 POLR1AO95602 1720 aaPredicted RBP23.95■■□□□ 1.42
RPS28-203ENST00000600659 PIK3C2BO00750 1634 aa23.93■■□□□ 1.42
RPS28-203ENST00000600659 NEURL4Q96JN8 1562 aa23.93■■□□□ 1.42
RPS28-203ENST00000600659 PTPRTO14522 1441 aa23.92■■□□□ 1.42
RPS28-203ENST00000600659 KDM5AP29375 1690 aaKnown RBP23.89■■□□□ 1.42
RPS28-203ENST00000600659 NUP155O75694 1391 aa23.89■■□□□ 1.41
RPS28-203ENST00000600659 NCKAP5LQ9HCH0 1330 aa23.87■■□□□ 1.41
RPS28-203ENST00000600659 ARHGAP23Q9P227 1491 aa23.84■■□□□ 1.41
RPS28-203ENST00000600659 MYO5BQ9ULV0 1848 aa23.83■■□□□ 1.41
RPS28-203ENST00000600659 SLIT1O75093 1534 aa23.83■■□□□ 1.41
RPS28-203ENST00000600659 PKD2Q13563 968 aa23.83■■□□□ 1.4
RPS28-203ENST00000600659 ADGRB3O60242 1522 aa23.82■■□□□ 1.4
RPS28-203ENST00000600659 DMRT2Q9Y5R5 561 aa23.82■■□□□ 1.4
RPS28-203ENST00000600659 SPHKAPQ2M3C7 1700 aa23.81■■□□□ 1.4
RPS28-203ENST00000600659 THEMISQ8N1K5 641 aaPredicted RBP23.81■■□□□ 1.4
RPS28-203ENST00000600659 MED14O60244 1454 aa23.8■■□□□ 1.4
RPS28-203ENST00000600659 IDI1Q13907 227 aa23.8■■□□□ 1.4
RPS28-203ENST00000600659 LTBP4Q8N2S1 1624 aa23.79■■□□□ 1.4
RPS28-203ENST00000600659 TMEM131LA2VDJ0 1609 aa23.78■■□□□ 1.4
RPS28-203ENST00000600659 IQGAP1P46940 1657 aa23.77■■□□□ 1.4
RPS28-203ENST00000600659 SLC52A1Q9NWF4 448 aa23.74■■□□□ 1.39
RPS28-203ENST00000600659 SCAF11Q99590 1463 aaKnown RBP23.73■■□□□ 1.39
RPS28-203ENST00000600659 TMEM2Q9UHN6 1383 aa23.73■■□□□ 1.39
RPS28-203ENST00000600659 NPHP4O75161 1426 aaPredicted RBP23.72■■□□□ 1.39
RPS28-203ENST00000600659 ANKLE2Q86XL3 938 aa23.72■■□□□ 1.39
RPS28-203ENST00000600659 TRPM2O94759 1503 aa23.71■■□□□ 1.39
RPS28-203ENST00000600659 LTKP29376 864 aa23.7■■□□□ 1.38
RPS28-203ENST00000600659 CLTCL1P53675 1640 aa23.7■■□□□ 1.38
RPS28-203ENST00000600659 ZFYVE9O95405 1425 aa23.69■■□□□ 1.38
RPS28-203ENST00000600659 SETD5Q9C0A6 1442 aa23.69■■□□□ 1.38
RPS28-203ENST00000600659 ZNF335Q9H4Z2 1342 aaPredicted RBP23.67■■□□□ 1.38
RPS28-203ENST00000600659 STRCP1A6NGW2 1772 aa23.66■■□□□ 1.38
RPS28-203ENST00000600659 TRIM52Q96A61 297 aa23.64■■□□□ 1.38
RPS28-203ENST00000600659 RAB3GAP2Q9H2M9 1393 aa23.64■■□□□ 1.37
RPS28-203ENST00000600659 CERKQ8TCT0 537 aa23.62■■□□□ 1.37
RPS28-203ENST00000600659 STAG3Q9UJ98 1225 aa23.62■■□□□ 1.37
RPS28-203ENST00000600659 TXNDC2Q86VQ3 553 aa23.61■■□□□ 1.37
RPS28-203ENST00000600659 SLC4A1APQ9BWU0 796 aaKnown RBP23.6■■□□□ 1.37
RPS28-203ENST00000600659 KIF1BO60333 1816 aa23.6■■□□□ 1.37
RPS28-203ENST00000600659 RIMS2Q9UQ26 1411 aa23.59■■□□□ 1.37
RPS28-203ENST00000600659 ILDR1Q86SU0 546 aaPredicted RBP23.58■■□□□ 1.36
RPS28-203ENST00000600659 IQSEC2Q5JU85 1478 aa23.57■■□□□ 1.36
RPS28-203ENST00000600659 EID1Q9Y6B2 187 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms