RNA–Protein interactions for RNA: ENST00000600277.5

SLC27A1-208, Transcript of solute carrier family 27 member 1, human

TSL 2

Gene SLC27A1, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC27A1-208	ENST00000600277	PCGF6	Q9BYE7	350 aa		33.08	■■■□□ 2.89
SLC27A1-208	ENST00000600277	GCC2	Q8IWJ2	1684 aa		33.05	■■■□□ 2.88
SLC27A1-208	ENST00000600277	ESF1	Q9H501	851 aa	Known RBP	33.05	■■■□□ 2.88
SLC27A1-208	ENST00000600277	MADD	Q8WXG6	1647 aa		33.05	■■■□□ 2.88
SLC27A1-208	ENST00000600277	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.02	■■■□□ 2.88
SLC27A1-208	ENST00000600277	PPP6R1	Q9UPN7	881 aa		33	■■■□□ 2.87
SLC27A1-208	ENST00000600277	RAB3GAP2	Q9H2M9	1393 aa		32.99	■■■□□ 2.87
SLC27A1-208	ENST00000600277	HRC	P23327	699 aa		32.98	■■■□□ 2.87
SLC27A1-208	ENST00000600277	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.93	■■■□□ 2.86
SLC27A1-208	ENST00000600277	RNF17	Q9BXT8	1623 aa	Known RBP	32.92	■■■□□ 2.86
SLC27A1-208	ENST00000600277	FER1L4	A9Z1Z3	1794 aa		32.92	■■■□□ 2.86
SLC27A1-208	ENST00000600277	WASHC2C	Q9Y4E1	1318 aa		32.92	■■■□□ 2.86
SLC27A1-208	ENST00000600277	RIMS1	Q86UR5	1692 aa	Known RBP	32.91	■■■□□ 2.86
SLC27A1-208	ENST00000600277	ACIN1	Q9UKV3	1341 aa	Known RBP	32.9	■■■□□ 2.86
SLC27A1-208	ENST00000600277	DEPDC5	O75140	1603 aa		32.89	■■■□□ 2.86
SLC27A1-208	ENST00000600277	MROH1	Q8NDA8	1641 aa		32.89	■■■□□ 2.86
SLC27A1-208	ENST00000600277	CNTLN	Q9NXG0	1405 aa		32.89	■■■□□ 2.86
SLC27A1-208	ENST00000600277	PLPPR3	Q6T4P5	718 aa		32.88	■■■□□ 2.85
SLC27A1-208	ENST00000600277	KANK1	Q14678	1352 aa		32.88	■■■□□ 2.85
SLC27A1-208	ENST00000600277	PRDM15	P57071	1507 aa	Predicted RBP	32.88	■■■□□ 2.85
SLC27A1-208	ENST00000600277	UNC13B	O14795	1591 aa		32.87	■■■□□ 2.85
SLC27A1-208	ENST00000600277	VWDE	Q8N2E2	1590 aa		32.83	■■■□□ 2.85
SLC27A1-208	ENST00000600277	FAM135A	Q9P2D6	1515 aa		32.82	■■■□□ 2.85
SLC27A1-208	ENST00000600277	NUP155	O75694	1391 aa		32.82	■■■□□ 2.84
SLC27A1-208	ENST00000600277	KDM5D	Q9BY66	1539 aa		32.82	■■■□□ 2.84
SLC27A1-208	ENST00000600277	CLTC	Q00610	1675 aa	Known RBP	32.8	■■■□□ 2.84
SLC27A1-208	ENST00000600277	ZMYM3	Q14202	1370 aa		32.78	■■■□□ 2.84
SLC27A1-208	ENST00000600277	TRIM52	Q96A61	297 aa		32.77	■■■□□ 2.84
SLC27A1-208	ENST00000600277	LMTK3	Q96Q04	1460 aa		32.76	■■■□□ 2.84
SLC27A1-208	ENST00000600277	LMTK2	Q8IWU2	1503 aa		32.76	■■■□□ 2.83
SLC27A1-208	ENST00000600277	CEBPA	P49715	358 aa	Predicted RBP	32.76	■■■□□ 2.83
SLC27A1-208	ENST00000600277	ABCC3	O15438	1527 aa		32.75	■■■□□ 2.83
SLC27A1-208	ENST00000600277	ZC3H13	Q5T200	1668 aa	Known RBP	32.75	■■■□□ 2.83
SLC27A1-208	ENST00000600277	MROH2A	A6NES4	1674 aa		32.74	■■■□□ 2.83
SLC27A1-208	ENST00000600277	PZP	P20742	1482 aa		32.73	■■■□□ 2.83
SLC27A1-208	ENST00000600277	IQGAP3	Q86VI3	1631 aa		32.72	■■■□□ 2.83
SLC27A1-208	ENST00000600277	CEP152	O94986	1710 aa		32.7	■■■□□ 2.82
SLC27A1-208	ENST00000600277	C3	P01024	1663 aa		32.68	■■■□□ 2.82
SLC27A1-208	ENST00000600277	HSPA2	P54652	639 aa		32.66	■■■□□ 2.82
SLC27A1-208	ENST00000600277	MPHOSPH9	Q99550	1183 aa		32.66	■■■□□ 2.82
SLC27A1-208	ENST00000600277	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.66	■■■□□ 2.82
SLC27A1-208	ENST00000600277	ARHGAP31	Q2M1Z3	1444 aa		32.64	■■■□□ 2.82
SLC27A1-208	ENST00000600277	CAMSAP1	Q5T5Y3	1602 aa		32.64	■■■□□ 2.82
SLC27A1-208	ENST00000600277	EFCAB6	Q5THR3	1501 aa		32.6	■■■□□ 2.81
SLC27A1-208	ENST00000600277	ILDR1	Q86SU0	546 aa	Predicted RBP	32.6	■■■□□ 2.81
SLC27A1-208	ENST00000600277	NPAT	Q14207	1427 aa		32.59	■■■□□ 2.81
SLC27A1-208	ENST00000600277	TET3	O43151	1660 aa		32.59	■■■□□ 2.81
SLC27A1-208	ENST00000600277	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.59	■■■□□ 2.81
SLC27A1-208	ENST00000600277	PKD2	Q13563	968 aa		32.58	■■■□□ 2.81
SLC27A1-208	ENST00000600277	RPRD2	Q5VT52	1461 aa	Known RBP	32.56	■■■□□ 2.8
SLC27A1-208	ENST00000600277	DHX57	Q6P158	1386 aa	Known RBP	32.54	■■■□□ 2.8
SLC27A1-208	ENST00000600277	SETD1B	Q9UPS6	1966 aa	Known RBP	32.5	■■■□□ 2.79
SLC27A1-208	ENST00000600277	CFAP65	Q6ZU64	1925 aa	Known RBP	32.5	■■■□□ 2.79
SLC27A1-208	ENST00000600277	TNR	Q92752	1358 aa		32.49	■■■□□ 2.79
SLC27A1-208	ENST00000600277	ERVK-7	P63135	1459 aa		32.48	■■■□□ 2.79
SLC27A1-208	ENST00000600277		E9PCH4	1651 aa		32.47	■■■□□ 2.79
SLC27A1-208	ENST00000600277	FOXD1	Q16676	465 aa		32.47	■■■□□ 2.79
SLC27A1-208	ENST00000600277	PTPRT	O14522	1441 aa		32.46	■■■□□ 2.79
SLC27A1-208	ENST00000600277	NOS1	P29475	1434 aa		32.46	■■■□□ 2.79
SLC27A1-208	ENST00000600277	PREX1	Q8TCU6	1659 aa		32.45	■■■□□ 2.78
SLC27A1-208	ENST00000600277	SPATA31D1	Q6ZQQ2	1576 aa		32.44	■■■□□ 2.78
SLC27A1-208	ENST00000600277	UHRF1BP1	Q6BDS2	1440 aa		32.43	■■■□□ 2.78
SLC27A1-208	ENST00000600277	PLA2R1	Q13018	1463 aa		32.43	■■■□□ 2.78
SLC27A1-208	ENST00000600277	ANKRD30B	Q9BXX2	1392 aa		32.4	■■■□□ 2.78
SLC27A1-208	ENST00000600277	NLRP1	Q9C000	1473 aa		32.35	■■■□□ 2.77
SLC27A1-208	ENST00000600277	SLC52A1	Q9NWF4	448 aa		32.34	■■■□□ 2.77
SLC27A1-208	ENST00000600277	MYO3A	Q8NEV4	1616 aa		32.34	■■■□□ 2.77
SLC27A1-208	ENST00000600277	TRPM2	O94759	1503 aa		32.33	■■■□□ 2.77
SLC27A1-208	ENST00000600277	SYNM	O15061	1565 aa		32.32	■■■□□ 2.76
SLC27A1-208	ENST00000600277	IDI1	Q13907	227 aa		32.3	■■■□□ 2.76
SLC27A1-208	ENST00000600277	A2ML1	A8K2U0	1454 aa		32.3	■■■□□ 2.76
SLC27A1-208	ENST00000600277	STAG3	Q9UJ98	1225 aa		32.29	■■■□□ 2.76
SLC27A1-208	ENST00000600277	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.28	■■■□□ 2.76
SLC27A1-208	ENST00000600277	SPHKAP	Q2M3C7	1700 aa		32.27	■■■□□ 2.76
SLC27A1-208	ENST00000600277	CLSPN	Q9HAW4	1339 aa		32.27	■■■□□ 2.76
SLC27A1-208	ENST00000600277	ZNF142	P52746	1687 aa	Predicted RBP	32.24	■■■□□ 2.75
SLC27A1-208	ENST00000600277	CCDC144A	A2RUR9	1427 aa		32.24	■■■□□ 2.75
SLC27A1-208	ENST00000600277	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.24	■■■□□ 2.75
SLC27A1-208	ENST00000600277	CCER1	Q8TC90	406 aa	Predicted RBP	32.23	■■■□□ 2.75
SLC27A1-208	ENST00000600277	FBXO41	Q8TF61	875 aa		32.23	■■■□□ 2.75
SLC27A1-208	ENST00000600277	UGGT1	Q9NYU2	1555 aa		32.22	■■■□□ 2.75
SLC27A1-208	ENST00000600277	PIK3C2B	O00750	1634 aa		32.22	■■■□□ 2.75
SLC27A1-208	ENST00000600277	CHGA	P10645	457 aa	Known RBP	32.2	■■■□□ 2.75
SLC27A1-208	ENST00000600277	STRC	Q7RTU9	1775 aa		32.19	■■■□□ 2.74
SLC27A1-208	ENST00000600277	DMRT2	Q9Y5R5	561 aa		32.19	■■■□□ 2.74
SLC27A1-208	ENST00000600277	CLTCL1	P53675	1640 aa		32.18	■■■□□ 2.74
SLC27A1-208	ENST00000600277	SIN3A	Q96ST3	1273 aa		32.15	■■■□□ 2.74
SLC27A1-208	ENST00000600277	UBR1	Q8IWV7	1749 aa		32.13	■■■□□ 2.73
SLC27A1-208	ENST00000600277	SPATA31E1	Q6ZUB1	1445 aa		32.11	■■■□□ 2.73
SLC27A1-208	ENST00000600277	ADGRB3	O60242	1522 aa		32.11	■■■□□ 2.73
SLC27A1-208	ENST00000600277	KDM5A	P29375	1690 aa	Known RBP	32.11	■■■□□ 2.73
SLC27A1-208	ENST00000600277	CERK	Q8TCT0	537 aa		32.1	■■■□□ 2.73
SLC27A1-208	ENST00000600277	NEURL4	Q96JN8	1562 aa		32.07	■■■□□ 2.72
SLC27A1-208	ENST00000600277	ANKLE2	Q86XL3	938 aa		32.07	■■■□□ 2.72
SLC27A1-208	ENST00000600277	TMEM131L	A2VDJ0	1609 aa		32.06	■■■□□ 2.72
SLC27A1-208	ENST00000600277	ZNF326	Q5BKZ1	582 aa	Known RBP	32.05	■■■□□ 2.72
SLC27A1-208	ENST00000600277	EID1	Q9Y6B2	187 aa		32.05	■■■□□ 2.72
SLC27A1-208	ENST00000600277	TMEM2	Q9UHN6	1383 aa		32.04	■■■□□ 2.72
SLC27A1-208	ENST00000600277	KIF1B	O60333	1816 aa		32.04	■■■□□ 2.72
SLC27A1-208	ENST00000600277	HDGF	P51858	240 aa	Known RBP	32.03	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms