RNA–Protein interactions for RNA: ENST00000599421.1

LINC00649-210, long intergenic non-protein coding RNA 649, humanhuman

TSL 2

Gene LINC00649, Length 728 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-210ENST00000599421 PIP4K2BP78356 416 aa15.32■□□□□ 0.04
LINC00649-210ENST00000599421 RTEL1-TNFRSF6BF6WH68 1400 aa15.3■□□□□ 0.04
LINC00649-210ENST00000599421 TNRQ92752 1358 aa15.3■□□□□ 0.04
LINC00649-210ENST00000599421 FAM135AQ9P2D6 1515 aa15.3■□□□□ 0.04
LINC00649-210ENST00000599421 EHBP1L1Q8N3D4 1523 aa15.29■□□□□ 0.04
LINC00649-210ENST00000599421 PZPP20742 1482 aa15.29■□□□□ 0.04
LINC00649-210ENST00000599421 MBD5Q9P267 1494 aa15.29■□□□□ 0.04
LINC00649-210ENST00000599421 VWDEQ8N2E2 1590 aa15.28■□□□□ 0.04
LINC00649-210ENST00000599421 KDM5DQ9BY66 1539 aa15.28■□□□□ 0.04
LINC00649-210ENST00000599421 MTUS2Q5JR59 1369 aa15.28■□□□□ 0.04
LINC00649-210ENST00000599421 DHX29Q7Z478 1369 aaKnown RBP15.28■□□□□ 0.04
LINC00649-210ENST00000599421 ALKQ9UM73 1620 aa15.27■□□□□ 0.03
LINC00649-210ENST00000599421 ZNF644Q9H582 1327 aaPredicted RBP15.26■□□□□ 0.03
LINC00649-210ENST00000599421 DEPDC5O75140 1603 aa15.26■□□□□ 0.03
LINC00649-210ENST00000599421 FBXO31Q5XUX0 539 aaPredicted RBP15.26■□□□□ 0.03
LINC00649-210ENST00000599421 ANKLE2Q86XL3 938 aa15.25■□□□□ 0.03
LINC00649-210ENST00000599421 MED14O60244 1454 aa15.25■□□□□ 0.03
LINC00649-210ENST00000599421 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.24■□□□□ 0.03
LINC00649-210ENST00000599421 PHF23Q9BUL5 403 aaPredicted RBP15.24■□□□□ 0.03
LINC00649-210ENST00000599421 NLRP1Q9C000 1473 aa15.24■□□□□ 0.03
LINC00649-210ENST00000599421 CEP162Q5TB80 1403 aa15.24■□□□□ 0.03
LINC00649-210ENST00000599421 UGGT1Q9NYU2 1555 aa15.24■□□□□ 0.03
LINC00649-210ENST00000599421 IQGAP1P46940 1657 aa15.23■□□□□ 0.03
LINC00649-210ENST00000599421 KIF3BO15066 747 aa15.23■□□□□ 0.03
LINC00649-210ENST00000599421 THEMISQ8N1K5 641 aaPredicted RBP15.23■□□□□ 0.03
LINC00649-210ENST00000599421 NPHP4O75161 1426 aaPredicted RBP15.23■□□□□ 0.03
LINC00649-210ENST00000599421 MIA2Q96PC5 1412 aa15.22■□□□□ 0.03
LINC00649-210ENST00000599421 STRCP1A6NGW2 1772 aa15.21■□□□□ 0.03
LINC00649-210ENST00000599421 CCDC141Q6ZP82 1450 aa15.21■□□□□ 0.03
LINC00649-210ENST00000599421 WASHC2CQ9Y4E1 1318 aa15.2■□□□□ 0.02
LINC00649-210ENST00000599421 RNF17Q9BXT8 1623 aaKnown RBP15.2■□□□□ 0.02
LINC00649-210ENST00000599421 SYNMO15061 1565 aa15.19■□□□□ 0.02
LINC00649-210ENST00000599421 CAMSAP2Q08AD1 1489 aa15.18■□□□□ 0.02
LINC00649-210ENST00000599421 LRRC7Q96NW7 1537 aa15.17■□□□□ 0.02
LINC00649-210ENST00000599421 NCOA2Q15596 1464 aa15.17■□□□□ 0.02
LINC00649-210ENST00000599421 RSPH4AQ5TD94 716 aa15.16■□□□□ 0.02
LINC00649-210ENST00000599421 ZC3H13Q5T200 1668 aaKnown RBP15.16■□□□□ 0.02
LINC00649-210ENST00000599421 CFAP65Q6ZU64 1925 aaKnown RBP15.15■□□□□ 0.02
LINC00649-210ENST00000599421 ARHGEF5Q12774 1597 aa15.15■□□□□ 0.02
LINC00649-210ENST00000599421 ABCC3O15438 1527 aa15.13■□□□□ 0.01
LINC00649-210ENST00000599421 ERVK-7P63135 1459 aa15.12■□□□□ 0.01
LINC00649-210ENST00000599421 UBR1Q8IWV7 1749 aa15.12■□□□□ 0.01
LINC00649-210ENST00000599421 XIRP1Q702N8 1843 aaKnown RBP15.11■□□□□ 0.01
LINC00649-210ENST00000599421 SENP3Q9H4L4 574 aaPredicted RBP15.11■□□□□ 0.01
LINC00649-210ENST00000599421 EIF2AK4Q9P2K8 1649 aaKnown RBP15.1■□□□□ 0.01
LINC00649-210ENST00000599421 TSPY4P0CV99 314 aa15.09■□□□□ 0.01
LINC00649-210ENST00000599421 TSPY10P0CW01 314 aa15.09■□□□□ 0.01
LINC00649-210ENST00000599421 CEP152O94986 1710 aa15.09■□□□□ 0.01
LINC00649-210ENST00000599421 SCAF11Q99590 1463 aaKnown RBP15.08■□□□□ 0.01
LINC00649-210ENST00000599421 MAST1Q9Y2H9 1570 aa15.08■□□□□ 0
LINC00649-210ENST00000599421 MROH1Q8NDA8 1641 aa15.08■□□□□ 0
LINC00649-210ENST00000599421 RGS17Q9UGC6 210 aaPredicted RBP15.08■□□□□ 0
LINC00649-210ENST00000599421 VPS8Q8N3P4 1428 aa15.07■□□□□ 0
LINC00649-210ENST00000599421 LRRC9Q6ZRR7 1453 aa15.07■□□□□ 0
LINC00649-210ENST00000599421 ARHGAP23Q9P227 1491 aa15.06■□□□□ 0
LINC00649-210ENST00000599421 SLIT1O75093 1534 aa15.06■□□□□ 0
LINC00649-210ENST00000599421 LOC105371045A0A1W2PR82 267 aa15.05■□□□□ -0
LINC00649-210ENST00000599421 CROCC2H7BZ55 1655 aa15.05■□□□□ -0
LINC00649-210ENST00000599421 FAM135BQ49AJ0 1406 aa15.02■□□□□ -0
LINC00649-210ENST00000599421 LTKP29376 864 aa15.02■□□□□ -0
LINC00649-210ENST00000599421 TXNDC2Q86VQ3 553 aa15.01□□□□□ -0.01
LINC00649-210ENST00000599421 ARHGAP31Q2M1Z3 1444 aa15□□□□□ -0.01
LINC00649-210ENST00000599421 PRDM15P57071 1507 aaPredicted RBP14.99□□□□□ -0.01
LINC00649-210ENST00000599421 DUOX2Q9NRD8 1548 aa14.99□□□□□ -0.01
LINC00649-210ENST00000599421 MAP3K1Q13233 1512 aa14.98□□□□□ -0.01
LINC00649-210ENST00000599421 ROBO1Q9Y6N7 1651 aa14.98□□□□□ -0.01
LINC00649-210ENST00000599421 EID1Q9Y6B2 187 aa14.98□□□□□ -0.01
LINC00649-210ENST00000599421 PIK3C2BO00750 1634 aa14.98□□□□□ -0.01
LINC00649-210ENST00000599421 KDM5AP29375 1690 aaKnown RBP14.97□□□□□ -0.01
LINC00649-210ENST00000599421 KANK4Q5T7N3 995 aaPredicted RBP14.97□□□□□ -0.01
LINC00649-210ENST00000599421 POTEAQ6S8J7 498 aa14.97□□□□□ -0.01
LINC00649-210ENST00000599421 MYOM3Q5VTT5 1437 aa14.96□□□□□ -0.01
LINC00649-210ENST00000599421 TMEM94Q12767 1356 aa14.96□□□□□ -0.02
LINC00649-210ENST00000599421 TMEM2Q9UHN6 1383 aa14.96□□□□□ -0.02
LINC00649-210ENST00000599421 PTPN23Q9H3S7 1636 aa14.95□□□□□ -0.02
LINC00649-210ENST00000599421 ERBINQ96RT1 1412 aa14.93□□□□□ -0.02
LINC00649-210ENST00000599421 SETD1AO15047 1707 aaKnown RBP14.93□□□□□ -0.02
LINC00649-210ENST00000599421 EFCAB6Q5THR3 1501 aa14.92□□□□□ -0.02
LINC00649-210ENST00000599421 KCNA6P17658 529 aa14.92□□□□□ -0.02
LINC00649-210ENST00000599421 KIF15Q9NS87 1388 aa14.92□□□□□ -0.02
LINC00649-210ENST00000599421 TET3O43151 1660 aa14.92□□□□□ -0.02
LINC00649-210ENST00000599421 NWD1Q149M9 1564 aa14.91□□□□□ -0.02
LINC00649-210ENST00000599421 NKTRP30414 1462 aaKnown RBP14.91□□□□□ -0.02
LINC00649-210ENST00000599421 PHLPP1O60346 1717 aa14.9□□□□□ -0.02
LINC00649-210ENST00000599421 STAG3Q9UJ98 1225 aa14.9□□□□□ -0.02
LINC00649-210ENST00000599421 PROSER2Q86WR7 435 aaPredicted RBP14.89□□□□□ -0.03
LINC00649-210ENST00000599421 ABCC5O15440 1437 aa14.88□□□□□ -0.03
LINC00649-210ENST00000599421 LMTK2Q8IWU2 1503 aa14.87□□□□□ -0.03
LINC00649-210ENST00000599421 KANK1Q14678 1352 aa14.87□□□□□ -0.03
LINC00649-210ENST00000599421 IDI1Q13907 227 aa14.87□□□□□ -0.03
LINC00649-210ENST00000599421 SLC26A8Q96RN1 970 aa14.87□□□□□ -0.03
LINC00649-210ENST00000599421 ADGRB3O60242 1522 aa14.87□□□□□ -0.03
LINC00649-210ENST00000599421 MSH6P52701 1360 aa14.86□□□□□ -0.03
LINC00649-210ENST00000599421 RBM33Q96EV2 1170 aaKnown RBP14.86□□□□□ -0.03
LINC00649-210ENST00000599421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.86□□□□□ -0.03
LINC00649-210ENST00000599421 JCADQ9P266 1359 aa14.85□□□□□ -0.03
LINC00649-210ENST00000599421 CHD2O14647 1828 aaKnown RBP14.85□□□□□ -0.03
LINC00649-210ENST00000599421 RRP7BPQ9NSQ0 103 aa14.85□□□□□ -0.03
LINC00649-210ENST00000599421 DAPK1P53355 1430 aa14.84□□□□□ -0.03
LINC00649-210ENST00000599421 COL16A1Q07092 1604 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms