RNA–Protein interactions for RNA: ENST00000599373.5

DDX49-209, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-209ENST00000599373 ALKQ9UM73 1620 aa26.25■■□□□ 1.79
DDX49-209ENST00000599373 TIAM1Q13009 1591 aa26.25■■□□□ 1.79
DDX49-209ENST00000599373 SHANK2Q9UPX8 1470 aa26.25■■□□□ 1.79
DDX49-209ENST00000599373 CPS1P31327 1500 aa26.24■■□□□ 1.79
DDX49-209ENST00000599373 POLR1AO95602 1720 aaPredicted RBP26.23■■□□□ 1.79
DDX49-209ENST00000599373 KIAA1107Q9UPP5 1409 aa26.22■■□□□ 1.79
DDX49-209ENST00000599373 FBXO31Q5XUX0 539 aaPredicted RBP26.22■■□□□ 1.79
DDX49-209ENST00000599373 CFDP1Q9UEE9 299 aaPredicted RBP26.22■■□□□ 1.79
DDX49-209ENST00000599373 FYCO1Q9BQS8 1478 aa26.22■■□□□ 1.79
DDX49-209ENST00000599373 PHF23Q9BUL5 403 aaPredicted RBP26.2■■□□□ 1.78
DDX49-209ENST00000599373 VWDEQ8N2E2 1590 aa26.18■■□□□ 1.78
DDX49-209ENST00000599373 ADGBQ8N7X0 1667 aa26.18■■□□□ 1.78
DDX49-209ENST00000599373 KANK4Q5T7N3 995 aaPredicted RBP26.17■■□□□ 1.78
DDX49-209ENST00000599373 SENP3Q9H4L4 574 aaPredicted RBP26.17■■□□□ 1.78
DDX49-209ENST00000599373 PLEKHH2Q8IVE3 1493 aa26.16■■□□□ 1.78
DDX49-209ENST00000599373 ZNF644Q9H582 1327 aaPredicted RBP26.15■■□□□ 1.78
DDX49-209ENST00000599373 TNRQ92752 1358 aa26.15■■□□□ 1.78
DDX49-209ENST00000599373 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.14■■□□□ 1.78
DDX49-209ENST00000599373 CCNB3Q8WWL7 1395 aa26.13■■□□□ 1.77
DDX49-209ENST00000599373 ANKLE2Q86XL3 938 aa26.1■■□□□ 1.77
DDX49-209ENST00000599373 ZEB1P37275 1124 aaPredicted RBP26.09■■□□□ 1.77
DDX49-209ENST00000599373 LRRC9Q6ZRR7 1453 aa26.09■■□□□ 1.77
DDX49-209ENST00000599373 STRCP1A6NGW2 1772 aa26.08■■□□□ 1.77
DDX49-209ENST00000599373 MBD5Q9P267 1494 aa26.08■■□□□ 1.77
DDX49-209ENST00000599373 DHX29Q7Z478 1369 aaKnown RBP26.07■■□□□ 1.76
DDX49-209ENST00000599373 NPHP4O75161 1426 aaPredicted RBP26.06■■□□□ 1.76
DDX49-209ENST00000599373 RRBP1Q9P2E9 1410 aaKnown RBP26.06■■□□□ 1.76
DDX49-209ENST00000599373 PZPP20742 1482 aa26.06■■□□□ 1.76
DDX49-209ENST00000599373 RGS17Q9UGC6 210 aaPredicted RBP26.06■■□□□ 1.76
DDX49-209ENST00000599373 KIF3BO15066 747 aa26.05■■□□□ 1.76
DDX49-209ENST00000599373 MED14O60244 1454 aa26.04■■□□□ 1.76
DDX49-209ENST00000599373 MTUS2Q5JR59 1369 aa26.04■■□□□ 1.76
DDX49-209ENST00000599373 THEMISQ8N1K5 641 aaPredicted RBP26.03■■□□□ 1.76
DDX49-209ENST00000599373 RTEL1-TNFRSF6BF6WH68 1400 aa26.02■■□□□ 1.76
DDX49-209ENST00000599373 MIA2Q96PC5 1412 aa26.02■■□□□ 1.76
DDX49-209ENST00000599373 LRRC7Q96NW7 1537 aa26.02■■□□□ 1.76
DDX49-209ENST00000599373 DEPDC5O75140 1603 aa26.01■■□□□ 1.75
DDX49-209ENST00000599373 KDM5DQ9BY66 1539 aa26.01■■□□□ 1.75
DDX49-209ENST00000599373 UGGT1Q9NYU2 1555 aa26.01■■□□□ 1.75
DDX49-209ENST00000599373 IQGAP1P46940 1657 aa25.99■■□□□ 1.75
DDX49-209ENST00000599373 WASHC2CQ9Y4E1 1318 aa25.98■■□□□ 1.75
DDX49-209ENST00000599373 NLRP1Q9C000 1473 aa25.97■■□□□ 1.75
DDX49-209ENST00000599373 FAM135AQ9P2D6 1515 aa25.96■■□□□ 1.75
DDX49-209ENST00000599373 RNF17Q9BXT8 1623 aaKnown RBP25.94■■□□□ 1.74
DDX49-209ENST00000599373 SYNMO15061 1565 aa25.89■■□□□ 1.73
DDX49-209ENST00000599373 ZC3H13Q5T200 1668 aaKnown RBP25.87■■□□□ 1.73
DDX49-209ENST00000599373 RSPH4AQ5TD94 716 aa25.87■■□□□ 1.73
DDX49-209ENST00000599373 CCDC141Q6ZP82 1450 aa25.86■■□□□ 1.73
DDX49-209ENST00000599373 POTEAQ6S8J7 498 aa25.86■■□□□ 1.73
DDX49-209ENST00000599373 XIRP1Q702N8 1843 aaKnown RBP25.84■■□□□ 1.73
DDX49-209ENST00000599373 EHBP1L1Q8N3D4 1523 aa25.83■■□□□ 1.73
DDX49-209ENST00000599373 CAMSAP2Q08AD1 1489 aa25.81■■□□□ 1.72
DDX49-209ENST00000599373 CCER1Q8TC90 406 aaPredicted RBP25.8■■□□□ 1.72
DDX49-209ENST00000599373 ABCC3O15438 1527 aa25.79■■□□□ 1.72
DDX49-209ENST00000599373 ERVK-7P63135 1459 aa25.79■■□□□ 1.72
DDX49-209ENST00000599373 LTKP29376 864 aa25.78■■□□□ 1.72
DDX49-209ENST00000599373 UBR1Q8IWV7 1749 aa25.77■■□□□ 1.72
DDX49-209ENST00000599373 TSPY4P0CV99 314 aa25.77■■□□□ 1.72
DDX49-209ENST00000599373 TSPY10P0CW01 314 aa25.77■■□□□ 1.72
DDX49-209ENST00000599373 NCOA2Q15596 1464 aa25.77■■□□□ 1.72
DDX49-209ENST00000599373 CFAP65Q6ZU64 1925 aaKnown RBP25.76■■□□□ 1.72
DDX49-209ENST00000599373 SCAF11Q99590 1463 aaKnown RBP25.74■■□□□ 1.71
DDX49-209ENST00000599373 FAM135BQ49AJ0 1406 aa25.71■■□□□ 1.71
DDX49-209ENST00000599373 MROH1Q8NDA8 1641 aa25.7■■□□□ 1.71
DDX49-209ENST00000599373 TXNDC2Q86VQ3 553 aa25.7■■□□□ 1.7
DDX49-209ENST00000599373 SETD1AO15047 1707 aaKnown RBP25.7■■□□□ 1.7
DDX49-209ENST00000599373 ARHGAP23Q9P227 1491 aa25.7■■□□□ 1.7
DDX49-209ENST00000599373 ARHGEF5Q12774 1597 aa25.69■■□□□ 1.7
DDX49-209ENST00000599373 CEP152O94986 1710 aa25.68■■□□□ 1.7
DDX49-209ENST00000599373 FGD6Q6ZV73 1430 aa25.67■■□□□ 1.7
DDX49-209ENST00000599373 SLIT1O75093 1534 aa25.67■■□□□ 1.7
DDX49-209ENST00000599373 MYOM3Q5VTT5 1437 aa25.64■■□□□ 1.7
DDX49-209ENST00000599373 RBM33Q96EV2 1170 aaKnown RBP25.64■■□□□ 1.7
DDX49-209ENST00000599373 ROBO1Q9Y6N7 1651 aa25.64■■□□□ 1.69
DDX49-209ENST00000599373 TMEM94Q12767 1356 aa25.63■■□□□ 1.69
DDX49-209ENST00000599373 EIF2AK4Q9P2K8 1649 aaKnown RBP25.61■■□□□ 1.69
DDX49-209ENST00000599373 MAST1Q9Y2H9 1570 aa25.6■■□□□ 1.69
DDX49-209ENST00000599373 EID1Q9Y6B2 187 aa25.57■■□□□ 1.68
DDX49-209ENST00000599373 PIK3C2BO00750 1634 aa25.56■■□□□ 1.68
DDX49-209ENST00000599373 TMEM2Q9UHN6 1383 aa25.55■■□□□ 1.68
DDX49-209ENST00000599373 FAM50AQ14320 339 aaKnown RBP25.54■■□□□ 1.68
DDX49-209ENST00000599373 PTPN23Q9H3S7 1636 aa25.54■■□□□ 1.68
DDX49-209ENST00000599373 KCNA6P17658 529 aa25.53■■□□□ 1.68
DDX49-209ENST00000599373 PROSER2Q86WR7 435 aaPredicted RBP25.53■■□□□ 1.68
DDX49-209ENST00000599373 SLC26A8Q96RN1 970 aa25.52■■□□□ 1.68
DDX49-209ENST00000599373 CLSPNQ9HAW4 1339 aa25.51■■□□□ 1.67
DDX49-209ENST00000599373 ARHGAP31Q2M1Z3 1444 aa25.51■■□□□ 1.67
DDX49-209ENST00000599373 TET3O43151 1660 aa25.5■■□□□ 1.67
DDX49-209ENST00000599373 SETD5Q9C0A6 1442 aa25.49■■□□□ 1.67
DDX49-209ENST00000599373 DHX57Q6P158 1386 aaKnown RBP25.49■■□□□ 1.67
DDX49-209ENST00000599373 PHLPP1O60346 1717 aa25.48■■□□□ 1.67
DDX49-209ENST00000599373 ITGAEP38570 1179 aa25.47■■□□□ 1.67
DDX49-209ENST00000599373 UPF1Q92900 1129 aaKnown RBP eCLIP25.47■■□□□ 1.67
DDX49-209ENST00000599373 PRDM15P57071 1507 aaPredicted RBP25.47■■□□□ 1.67
DDX49-209ENST00000599373 DUOX2Q9NRD8 1548 aa25.47■■□□□ 1.67
DDX49-209ENST00000599373 IDI1Q13907 227 aa25.45■■□□□ 1.66
DDX49-209ENST00000599373 JCADQ9P266 1359 aa25.44■■□□□ 1.66
DDX49-209ENST00000599373 SLAIN2Q9P270 581 aa25.44■■□□□ 1.66
DDX49-209ENST00000599373 STAG3Q9UJ98 1225 aa25.44■■□□□ 1.66
DDX49-209ENST00000599373 RAB3GAP2Q9H2M9 1393 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms