RNA–Protein interactions for RNA: ENST00000599004.1

C19orf48-211, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 5

Gene C19orf48, Length 866 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-211ENST00000599004 CHIC1Q5VXU3 224 aa19.41■□□□□ 0.7
C19orf48-211ENST00000599004 TNRQ92752 1358 aa19.41■□□□□ 0.7
C19orf48-211ENST00000599004 FBXO31Q5XUX0 539 aaPredicted RBP19.39■□□□□ 0.69
C19orf48-211ENST00000599004 ANKLE2Q86XL3 938 aa19.38■□□□□ 0.69
C19orf48-211ENST00000599004 VWDEQ8N2E2 1590 aa19.36■□□□□ 0.69
C19orf48-211ENST00000599004 DHX29Q7Z478 1369 aaKnown RBP19.36■□□□□ 0.69
C19orf48-211ENST00000599004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.36■□□□□ 0.69
C19orf48-211ENST00000599004 PZPP20742 1482 aa19.35■□□□□ 0.69
C19orf48-211ENST00000599004 MTUS2Q5JR59 1369 aa19.35■□□□□ 0.69
C19orf48-211ENST00000599004 ZNF644Q9H582 1327 aaPredicted RBP19.35■□□□□ 0.69
C19orf48-211ENST00000599004 RTEL1-TNFRSF6BF6WH68 1400 aa19.34■□□□□ 0.69
C19orf48-211ENST00000599004 ALKQ9UM73 1620 aa19.34■□□□□ 0.69
C19orf48-211ENST00000599004 KIF3BO15066 747 aa19.34■□□□□ 0.69
C19orf48-211ENST00000599004 THEMISQ8N1K5 641 aaPredicted RBP19.34■□□□□ 0.69
C19orf48-211ENST00000599004 KDM5DQ9BY66 1539 aa19.34■□□□□ 0.69
C19orf48-211ENST00000599004 MBD5Q9P267 1494 aa19.34■□□□□ 0.69
C19orf48-211ENST00000599004 NPHP4O75161 1426 aaPredicted RBP19.33■□□□□ 0.68
C19orf48-211ENST00000599004 FAM135AQ9P2D6 1515 aa19.31■□□□□ 0.68
C19orf48-211ENST00000599004 WASHC2CQ9Y4E1 1318 aa19.31■□□□□ 0.68
C19orf48-211ENST00000599004 MED14O60244 1454 aa19.31■□□□□ 0.68
C19orf48-211ENST00000599004 SENP3Q9H4L4 574 aaPredicted RBP19.31■□□□□ 0.68
C19orf48-211ENST00000599004 DEPDC5O75140 1603 aa19.31■□□□□ 0.68
C19orf48-211ENST00000599004 TIAM1Q13009 1591 aa19.31■□□□□ 0.68
C19orf48-211ENST00000599004 UGGT1Q9NYU2 1555 aa19.31■□□□□ 0.68
C19orf48-211ENST00000599004 NLRP1Q9C000 1473 aa19.3■□□□□ 0.68
C19orf48-211ENST00000599004 MIA2Q96PC5 1412 aa19.3■□□□□ 0.68
C19orf48-211ENST00000599004 IQGAP1P46940 1657 aa19.28■□□□□ 0.68
C19orf48-211ENST00000599004 LRRC7Q96NW7 1537 aa19.25■□□□□ 0.67
C19orf48-211ENST00000599004 STRCP1A6NGW2 1772 aa19.25■□□□□ 0.67
C19orf48-211ENST00000599004 RNF17Q9BXT8 1623 aaKnown RBP19.25■□□□□ 0.67
C19orf48-211ENST00000599004 EHBP1L1Q8N3D4 1523 aa19.24■□□□□ 0.67
C19orf48-211ENST00000599004 SYNMO15061 1565 aa19.23■□□□□ 0.67
C19orf48-211ENST00000599004 CCDC141Q6ZP82 1450 aa19.23■□□□□ 0.67
C19orf48-211ENST00000599004 CEP162Q5TB80 1403 aa19.2■□□□□ 0.66
C19orf48-211ENST00000599004 RSPH4AQ5TD94 716 aa19.2■□□□□ 0.66
C19orf48-211ENST00000599004 RGS17Q9UGC6 210 aaPredicted RBP19.19■□□□□ 0.66
C19orf48-211ENST00000599004 CAMSAP2Q08AD1 1489 aa19.18■□□□□ 0.66
C19orf48-211ENST00000599004 ZC3H13Q5T200 1668 aaKnown RBP19.15■□□□□ 0.66
C19orf48-211ENST00000599004 TSPY4P0CV99 314 aa19.14■□□□□ 0.65
C19orf48-211ENST00000599004 TSPY10P0CW01 314 aa19.14■□□□□ 0.65
C19orf48-211ENST00000599004 ABCC3O15438 1527 aa19.14■□□□□ 0.65
C19orf48-211ENST00000599004 ERVK-7P63135 1459 aa19.13■□□□□ 0.65
C19orf48-211ENST00000599004 NCOA2Q15596 1464 aa19.12■□□□□ 0.65
C19orf48-211ENST00000599004 ARHGEF5Q12774 1597 aa19.11■□□□□ 0.65
C19orf48-211ENST00000599004 SCAF11Q99590 1463 aaKnown RBP19.11■□□□□ 0.65
C19orf48-211ENST00000599004 UBR1Q8IWV7 1749 aa19.11■□□□□ 0.65
C19orf48-211ENST00000599004 CFAP65Q6ZU64 1925 aaKnown RBP19.1■□□□□ 0.65
C19orf48-211ENST00000599004 XIRP1Q702N8 1843 aaKnown RBP19.09■□□□□ 0.65
C19orf48-211ENST00000599004 LTKP29376 864 aa19.07■□□□□ 0.64
C19orf48-211ENST00000599004 TXNDC2Q86VQ3 553 aa19.07■□□□□ 0.64
C19orf48-211ENST00000599004 POTEAQ6S8J7 498 aa19.06■□□□□ 0.64
C19orf48-211ENST00000599004 EIF2AK4Q9P2K8 1649 aaKnown RBP19.06■□□□□ 0.64
C19orf48-211ENST00000599004 FAM135BQ49AJ0 1406 aa19.06■□□□□ 0.64
C19orf48-211ENST00000599004 CEP152O94986 1710 aa19.05■□□□□ 0.64
C19orf48-211ENST00000599004 SLIT1O75093 1534 aa19.05■□□□□ 0.64
C19orf48-211ENST00000599004 ARHGAP23Q9P227 1491 aa19.04■□□□□ 0.64
C19orf48-211ENST00000599004 MROH1Q8NDA8 1641 aa19.03■□□□□ 0.64
C19orf48-211ENST00000599004 MAST1Q9Y2H9 1570 aa19.03■□□□□ 0.64
C19orf48-211ENST00000599004 EID1Q9Y6B2 187 aa19.03■□□□□ 0.64
C19orf48-211ENST00000599004 TMEM94Q12767 1356 aa18.99■□□□□ 0.63
C19orf48-211ENST00000599004 ROBO1Q9Y6N7 1651 aa18.98■□□□□ 0.63
C19orf48-211ENST00000599004 TMEM2Q9UHN6 1383 aa18.96■□□□□ 0.63
C19orf48-211ENST00000599004 ARHGAP31Q2M1Z3 1444 aa18.96■□□□□ 0.63
C19orf48-211ENST00000599004 DUOX2Q9NRD8 1548 aa18.95■□□□□ 0.62
C19orf48-211ENST00000599004 SETD1AO15047 1707 aaKnown RBP18.95■□□□□ 0.62
C19orf48-211ENST00000599004 STAG3Q9UJ98 1225 aa18.95■□□□□ 0.62
C19orf48-211ENST00000599004 PIK3C2BO00750 1634 aa18.95■□□□□ 0.62
C19orf48-211ENST00000599004 KCNA6P17658 529 aa18.94■□□□□ 0.62
C19orf48-211ENST00000599004 PROSER2Q86WR7 435 aaPredicted RBP18.94■□□□□ 0.62
C19orf48-211ENST00000599004 LRRC9Q6ZRR7 1453 aa18.94■□□□□ 0.62
C19orf48-211ENST00000599004 MAP3K1Q13233 1512 aa18.93■□□□□ 0.62
C19orf48-211ENST00000599004 PRDM15P57071 1507 aaPredicted RBP18.92■□□□□ 0.62
C19orf48-211ENST00000599004 RBM33Q96EV2 1170 aaKnown RBP18.92■□□□□ 0.62
C19orf48-211ENST00000599004 EFCAB6Q5THR3 1501 aa18.9■□□□□ 0.62
C19orf48-211ENST00000599004 SLC26A8Q96RN1 970 aa18.9■□□□□ 0.62
C19orf48-211ENST00000599004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.89■□□□□ 0.61not detected■□□□□ 9.6
C19orf48-211ENST00000599004 KDM5AP29375 1690 aaKnown RBP18.89■□□□□ 0.61
C19orf48-211ENST00000599004 PHLPP1O60346 1717 aa18.88■□□□□ 0.61
C19orf48-211ENST00000599004 KIF15Q9NS87 1388 aa18.88■□□□□ 0.61
C19orf48-211ENST00000599004 JCADQ9P266 1359 aa18.88■□□□□ 0.61
C19orf48-211ENST00000599004 MYOM3Q5VTT5 1437 aa18.88■□□□□ 0.61
C19orf48-211ENST00000599004 TET3O43151 1660 aa18.87■□□□□ 0.61
C19orf48-211ENST00000599004 NKTRP30414 1462 aaKnown RBP18.87■□□□□ 0.61
C19orf48-211ENST00000599004 MSH6P52701 1360 aa18.87■□□□□ 0.61
C19orf48-211ENST00000599004 ERBINQ96RT1 1412 aa18.87■□□□□ 0.61
C19orf48-211ENST00000599004 IDI1Q13907 227 aa18.86■□□□□ 0.61
C19orf48-211ENST00000599004 SLAIN2Q9P270 581 aa18.86■□□□□ 0.61
C19orf48-211ENST00000599004 NWD1Q149M9 1564 aa18.85■□□□□ 0.61
C19orf48-211ENST00000599004 KANK1Q14678 1352 aa18.85■□□□□ 0.61
C19orf48-211ENST00000599004 RRP7BPQ9NSQ0 103 aa18.84■□□□□ 0.61
C19orf48-211ENST00000599004 BCANQ96GW7 911 aa18.83■□□□□ 0.6
C19orf48-211ENST00000599004 CROCC2H7BZ55 1655 aa18.8■□□□□ 0.6
C19orf48-211ENST00000599004 UPF1Q92900 1129 aaKnown RBP eCLIP18.8■□□□□ 0.6
C19orf48-211ENST00000599004 ADGRB3O60242 1522 aa18.79■□□□□ 0.6
C19orf48-211ENST00000599004 COL16A1Q07092 1604 aaPredicted RBP18.79■□□□□ 0.6
C19orf48-211ENST00000599004 KANK4Q5T7N3 995 aaPredicted RBP18.79■□□□□ 0.6
C19orf48-211ENST00000599004 MEX3CQ5U5Q3 659 aaKnown RBP18.79■□□□□ 0.6
C19orf48-211ENST00000599004 ABCC5O15440 1437 aa18.79■□□□□ 0.6
C19orf48-211ENST00000599004 LMTK2Q8IWU2 1503 aa18.79■□□□□ 0.6
C19orf48-211ENST00000599004 SPATA31A6Q5VVP1 1343 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms