RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-208ENST00000598969 ZEB1P37275 1124 aaPredicted RBP30.89■■■□□ 2.54
COPE-208ENST00000598969 KDM5DQ9BY66 1539 aa30.88■■■□□ 2.53
COPE-208ENST00000598969 BCORL1Q5H9F3 1711 aa30.88■■■□□ 2.53
COPE-208ENST00000598969 DEPDC5O75140 1603 aa30.87■■■□□ 2.53
COPE-208ENST00000598969 NUP155O75694 1391 aa30.87■■■□□ 2.53
COPE-208ENST00000598969 PZPP20742 1482 aa30.87■■■□□ 2.53
COPE-208ENST00000598969 SIGLEC1Q9BZZ2 1709 aa30.84■■■□□ 2.53
COPE-208ENST00000598969 MROH1Q8NDA8 1641 aa30.83■■■□□ 2.53
COPE-208ENST00000598969 RNF17Q9BXT8 1623 aaKnown RBP30.83■■■□□ 2.53
COPE-208ENST00000598969 MPHOSPH9Q99550 1183 aa30.82■■■□□ 2.52
COPE-208ENST00000598969 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.82■■■□□ 2.524e-6■■■□□ 15.1
COPE-208ENST00000598969 AGLP35573 1532 aa30.81■■■□□ 2.52
COPE-208ENST00000598969 PRDM15P57071 1507 aaPredicted RBP30.8■■■□□ 2.52
COPE-208ENST00000598969 IQGAP3Q86VI3 1631 aa30.79■■■□□ 2.52
COPE-208ENST00000598969 FAM135AQ9P2D6 1515 aa30.78■■■□□ 2.52
COPE-208ENST00000598969 VWDEQ8N2E2 1590 aa30.77■■■□□ 2.52
COPE-208ENST00000598969 SLC4A1APQ9BWU0 796 aaKnown RBP30.77■■■□□ 2.52
COPE-208ENST00000598969 GGT6Q6P531 493 aa30.74■■■□□ 2.51
COPE-208ENST00000598969 KANK1Q14678 1352 aa30.71■■■□□ 2.51
COPE-208ENST00000598969 PKD2Q13563 968 aa30.69■■■□□ 2.5
COPE-208ENST00000598969 CLSPNQ9HAW4 1339 aa30.68■■■□□ 2.5
COPE-208ENST00000598969 FOXD1Q16676 465 aa30.67■■■□□ 2.5
COPE-208ENST00000598969 LMTK2Q8IWU2 1503 aa30.65■■■□□ 2.5
COPE-208ENST00000598969 CEP152O94986 1710 aa30.63■■■□□ 2.49
COPE-208ENST00000598969 TET3O43151 1660 aa30.63■■■□□ 2.49
COPE-208ENST00000598969 ABCC3O15438 1527 aa30.63■■■□□ 2.49
COPE-208ENST00000598969 ARID4BQ4LE39 1312 aaPredicted RBP30.62■■■□□ 2.49
COPE-208ENST00000598969 WASHC2CQ9Y4E1 1318 aa30.6■■■□□ 2.49
COPE-208ENST00000598969 ANKRD30BQ9BXX2 1392 aa30.59■■■□□ 2.49
COPE-208ENST00000598969 MLECQ14165 292 aa30.59■■■□□ 2.49
COPE-208ENST00000598969 PPP6R1Q9UPN7 881 aa30.58■■■□□ 2.49
COPE-208ENST00000598969 E9PCH4 1651 aa30.57■■■□□ 2.48
COPE-208ENST00000598969 ZC3H13Q5T200 1668 aaKnown RBP30.57■■■□□ 2.48
COPE-208ENST00000598969 EFCAB6Q5THR3 1501 aa30.57■■■□□ 2.48
COPE-208ENST00000598969 CAMSAP1Q5T5Y3 1602 aa30.52■■■□□ 2.48
COPE-208ENST00000598969 SIN3AQ96ST3 1273 aa30.52■■■□□ 2.48
COPE-208ENST00000598969 PLA2R1Q13018 1463 aa30.49■■■□□ 2.47
COPE-208ENST00000598969 NPATQ14207 1427 aa30.48■■■□□ 2.47
COPE-208ENST00000598969 CLTCQ00610 1675 aaKnown RBP30.48■■■□□ 2.47
COPE-208ENST00000598969 ARHGAP31Q2M1Z3 1444 aa30.47■■■□□ 2.47
COPE-208ENST00000598969 RPRD2Q5VT52 1461 aaKnown RBP30.46■■■□□ 2.47
COPE-208ENST00000598969 PTPRTO14522 1441 aa30.44■■■□□ 2.46
COPE-208ENST00000598969 NEUROD1Q13562 356 aa30.43■■■□□ 2.46
COPE-208ENST00000598969 SPHKAPQ2M3C7 1700 aa30.41■■■□□ 2.46
COPE-208ENST00000598969 TRPM2O94759 1503 aa30.39■■■□□ 2.46
COPE-208ENST00000598969 ESF1Q9H501 851 aaKnown RBP30.38■■■□□ 2.45
COPE-208ENST00000598969 CNTLNQ9NXG0 1405 aa30.38■■■□□ 2.45
COPE-208ENST00000598969 NOS1P29475 1434 aa30.35■■■□□ 2.45
COPE-208ENST00000598969 FER1L4A9Z1Z3 1794 aa30.35■■■□□ 2.45
COPE-208ENST00000598969 CFAP65Q6ZU64 1925 aaKnown RBP30.35■■■□□ 2.45
COPE-208ENST00000598969 ZMYM3Q14202 1370 aa30.35■■■□□ 2.45
COPE-208ENST00000598969 CCDC144AA2RUR9 1427 aa30.34■■■□□ 2.45
COPE-208ENST00000598969 MROH2AA6NES4 1674 aa30.34■■■□□ 2.45
COPE-208ENST00000598969 ADAMTSL3P82987 1691 aa30.32■■■□□ 2.44
COPE-208ENST00000598969 PREX1Q8TCU6 1659 aa30.31■■■□□ 2.44
COPE-208ENST00000598969 FBXO31Q5XUX0 539 aaPredicted RBP30.31■■■□□ 2.44
COPE-208ENST00000598969 CLTCL1P53675 1640 aa30.3■■■□□ 2.44
COPE-208ENST00000598969 MADDQ8WXG6 1647 aa30.3■■■□□ 2.44
COPE-208ENST00000598969 ERVK-7P63135 1459 aa30.29■■■□□ 2.44
COPE-208ENST00000598969 SYNMO15061 1565 aa30.29■■■□□ 2.44
COPE-208ENST00000598969 UGGT1Q9NYU2 1555 aa30.28■■■□□ 2.44
COPE-208ENST00000598969 SPATA31D1Q6ZQQ2 1576 aa30.26■■■□□ 2.43
COPE-208ENST00000598969 TIMELESSQ9UNS1 1208 aa30.26■■■□□ 2.43
COPE-208ENST00000598969 TONSLQ96HA7 1378 aa30.25■■■□□ 2.43
COPE-208ENST00000598969 C3P01024 1663 aa30.23■■■□□ 2.43
COPE-208ENST00000598969 RIMS1Q86UR5 1692 aaKnown RBP30.23■■■□□ 2.43
COPE-208ENST00000598969 PIK3C2BO00750 1634 aa30.21■■■□□ 2.43
COPE-208ENST00000598969 CEBPAP49715 358 aaPredicted RBP30.2■■■□□ 2.43
COPE-208ENST00000598969 SPATA31E1Q6ZUB1 1445 aa30.18■■■□□ 2.42
COPE-208ENST00000598969 L3MBTL2Q969R5 705 aa30.18■■■□□ 2.42
COPE-208ENST00000598969 SLC52A1Q9NWF4 448 aa30.16■■■□□ 2.42
COPE-208ENST00000598969 IDI1Q13907 227 aa30.15■■■□□ 2.42
COPE-208ENST00000598969 TNRQ92752 1358 aa30.13■■■□□ 2.41
COPE-208ENST00000598969 KIF1BO60333 1816 aa30.13■■■□□ 2.41
COPE-208ENST00000598969 NEURL4Q96JN8 1562 aa30.12■■■□□ 2.41
COPE-208ENST00000598969 RGL3Q3MIN7 710 aa30.11■■■□□ 2.41
COPE-208ENST00000598969 ADGRB3O60242 1522 aa30.11■■■□□ 2.41
COPE-208ENST00000598969 PPP1R15AO75807 674 aaPredicted RBP30.1■■■□□ 2.41
COPE-208ENST00000598969 PLPPR3Q6T4P5 718 aa30.09■■■□□ 2.41
COPE-208ENST00000598969 PTPRMP28827 1452 aa30.05■■■□□ 2.4
COPE-208ENST00000598969 CHGAP10645 457 aaKnown RBP30.05■■■□□ 2.4
COPE-208ENST00000598969 TMEM131LA2VDJ0 1609 aa30.04■■■□□ 2.4
COPE-208ENST00000598969 DCAF11Q8TEB1 546 aa30.02■■■□□ 2.4
COPE-208ENST00000598969 KDM4FA0A1W2PPD8 638 aa30■■■□□ 2.39
COPE-208ENST00000598969 NLRP1Q9C000 1473 aa30■■■□□ 2.39
COPE-208ENST00000598969 MYO5BQ9ULV0 1848 aa29.99■■■□□ 2.39
COPE-208ENST00000598969 KDM2AQ9Y2K7 1162 aa29.98■■■□□ 2.39
COPE-208ENST00000598969 A2ML1A8K2U0 1454 aa29.97■■■□□ 2.39
COPE-208ENST00000598969 NBPF8Q3BBV2 869 aa29.95■■■□□ 2.39
COPE-208ENST00000598969 ZNF326Q5BKZ1 582 aaKnown RBP29.95■■■□□ 2.39
COPE-208ENST00000598969 IFT172Q9UG01 1749 aa29.95■■■□□ 2.38
COPE-208ENST00000598969 MYO3AQ8NEV4 1616 aa29.94■■■□□ 2.38
COPE-208ENST00000598969 UHRF1BP1Q6BDS2 1440 aa29.94■■■□□ 2.38
COPE-208ENST00000598969 STAG3Q9UJ98 1225 aa29.93■■■□□ 2.38
COPE-208ENST00000598969 KDM5AP29375 1690 aaKnown RBP29.92■■■□□ 2.38
COPE-208ENST00000598969 RPGRIP1LQ68CZ1 1315 aa29.92■■■□□ 2.38
COPE-208ENST00000598969 UBR1Q8IWV7 1749 aa29.92■■■□□ 2.38
COPE-208ENST00000598969 NEXMIFQ5QGS0 1516 aa29.91■■■□□ 2.38
COPE-208ENST00000598969 PPLO60437 1756 aa29.91■■■□□ 2.38
COPE-208ENST00000598969 STAC3Q96MF2 364 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms