RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-223	ENST00000598717	GGT6	Q6P531	493 aa		28.57	■■■□□ 2.16
LTBP4-223	ENST00000598717	BCORL1	Q5H9F3	1711 aa		28.55	■■■□□ 2.16
LTBP4-223	ENST00000598717	NUP155	O75694	1391 aa		28.54	■■■□□ 2.16
LTBP4-223	ENST00000598717	KANK1	Q14678	1352 aa		28.53	■■■□□ 2.16
LTBP4-223	ENST00000598717	UNC13B	O14795	1591 aa		28.51	■■■□□ 2.15
LTBP4-223	ENST00000598717	RNF17	Q9BXT8	1623 aa	Known RBP	28.51	■■■□□ 2.15
LTBP4-223	ENST00000598717	MLEC	Q14165	292 aa		28.5	■■■□□ 2.15
LTBP4-223	ENST00000598717	SIGLEC1	Q9BZZ2	1709 aa		28.49	■■■□□ 2.15
LTBP4-223	ENST00000598717	DEPDC5	O75140	1603 aa		28.49	■■■□□ 2.15
LTBP4-223	ENST00000598717	PPP6R1	Q9UPN7	881 aa		28.46	■■■□□ 2.15
LTBP4-223	ENST00000598717	PRDM15	P57071	1507 aa	Predicted RBP	28.46	■■■□□ 2.15
LTBP4-223	ENST00000598717	SLC4A1AP	Q9BWU0	796 aa	Known RBP	28.45	■■■□□ 2.14
LTBP4-223	ENST00000598717	WASHC2C	Q9Y4E1	1318 aa		28.44	■■■□□ 2.14
LTBP4-223	ENST00000598717	KDM5D	Q9BY66	1539 aa		28.44	■■■□□ 2.14
LTBP4-223	ENST00000598717	MROH1	Q8NDA8	1641 aa		28.44	■■■□□ 2.14
LTBP4-223	ENST00000598717	MPHOSPH9	Q99550	1183 aa		28.43	■■■□□ 2.14
LTBP4-223	ENST00000598717	ESF1	Q9H501	851 aa	Known RBP	28.42	■■■□□ 2.14
LTBP4-223	ENST00000598717	FAM135A	Q9P2D6	1515 aa		28.41	■■■□□ 2.14
LTBP4-223	ENST00000598717	PZP	P20742	1482 aa		28.4	■■■□□ 2.14
LTBP4-223	ENST00000598717	IQGAP3	Q86VI3	1631 aa		28.4	■■■□□ 2.14
LTBP4-223	ENST00000598717	VWDE	Q8N2E2	1590 aa		28.39	■■■□□ 2.14
LTBP4-223	ENST00000598717	DHX57	Q6P158	1386 aa	Known RBP	28.37	■■■□□ 2.13
LTBP4-223	ENST00000598717	PKD2	Q13563	968 aa		28.35	■■■□□ 2.13
LTBP4-223	ENST00000598717	ABCC3	O15438	1527 aa		28.34	■■■□□ 2.13
LTBP4-223	ENST00000598717	CCER1	Q8TC90	406 aa	Predicted RBP	28.34	■■■□□ 2.13
LTBP4-223	ENST00000598717	LMTK2	Q8IWU2	1503 aa		28.33	■■■□□ 2.13
LTBP4-223	ENST00000598717	ZC3H13	Q5T200	1668 aa	Known RBP	28.32	■■■□□ 2.12
LTBP4-223	ENST00000598717	CEP152	O94986	1710 aa		28.31	■■■□□ 2.12
LTBP4-223	ENST00000598717	TET3	O43151	1660 aa		28.29	■■■□□ 2.12
LTBP4-223	ENST00000598717	CNTLN	Q9NXG0	1405 aa		28.29	■■■□□ 2.12
LTBP4-223	ENST00000598717	FOXD1	Q16676	465 aa		28.27	■■■□□ 2.12
LTBP4-223	ENST00000598717	CLTC	Q00610	1675 aa	Known RBP	28.26	■■■□□ 2.12
LTBP4-223	ENST00000598717	EFCAB6	Q5THR3	1501 aa		28.25	■■■□□ 2.11
LTBP4-223	ENST00000598717	CAMSAP1	Q5T5Y3	1602 aa		28.25	■■■□□ 2.11
LTBP4-223	ENST00000598717	ARHGAP31	Q2M1Z3	1444 aa		28.22	■■■□□ 2.11
LTBP4-223	ENST00000598717	FER1L4	A9Z1Z3	1794 aa		28.21	■■■□□ 2.11
LTBP4-223	ENST00000598717	ZMYM3	Q14202	1370 aa		28.21	■■■□□ 2.11
LTBP4-223	ENST00000598717	RPRD2	Q5VT52	1461 aa	Known RBP	28.2	■■■□□ 2.1
LTBP4-223	ENST00000598717		E9PCH4	1651 aa		28.19	■■■□□ 2.1
LTBP4-223	ENST00000598717	ADAMTSL3	P82987	1691 aa		28.19	■■■□□ 2.1
LTBP4-223	ENST00000598717	NPAT	Q14207	1427 aa		28.19	■■■□□ 2.1
LTBP4-223	ENST00000598717	MADD	Q8WXG6	1647 aa		28.18	■■■□□ 2.1
LTBP4-223	ENST00000598717	CLSPN	Q9HAW4	1339 aa		28.18	■■■□□ 2.1
LTBP4-223	ENST00000598717	MROH2A	A6NES4	1674 aa		28.16	■■■□□ 2.1
LTBP4-223	ENST00000598717	ANKRD30B	Q9BXX2	1392 aa		28.14	■■■□□ 2.1
LTBP4-223	ENST00000598717	RIMS1	Q86UR5	1692 aa	Known RBP	28.13	■■■□□ 2.09
LTBP4-223	ENST00000598717	FBXO31	Q5XUX0	539 aa	Predicted RBP	28.11	■■■□□ 2.09
LTBP4-223	ENST00000598717	PLPPR3	Q6T4P5	718 aa		28.11	■■■□□ 2.09
LTBP4-223	ENST00000598717	PTPRT	O14522	1441 aa		28.1	■■■□□ 2.09
LTBP4-223	ENST00000598717	CEBPA	P49715	358 aa	Predicted RBP	28.1	■■■□□ 2.09
LTBP4-223	ENST00000598717	NOS1	P29475	1434 aa		28.07	■■■□□ 2.08
LTBP4-223	ENST00000598717	ERVK-7	P63135	1459 aa		28.07	■■■□□ 2.08
LTBP4-223	ENST00000598717	PLA2R1	Q13018	1463 aa		28.07	■■■□□ 2.08
LTBP4-223	ENST00000598717	SPHKAP	Q2M3C7	1700 aa		28.06	■■■□□ 2.08
LTBP4-223	ENST00000598717	CCDC144A	A2RUR9	1427 aa		28.06	■■■□□ 2.08
LTBP4-223	ENST00000598717	TRPM2	O94759	1503 aa		28.05	■■■□□ 2.08
LTBP4-223	ENST00000598717	C3	P01024	1663 aa		28.05	■■■□□ 2.08
LTBP4-223	ENST00000598717	CFAP65	Q6ZU64	1925 aa	Known RBP	28.05	■■■□□ 2.08
LTBP4-223	ENST00000598717	PREX1	Q8TCU6	1659 aa		28.05	■■■□□ 2.08
LTBP4-223	ENST00000598717	SIN3A	Q96ST3	1273 aa		28.05	■■■□□ 2.08
LTBP4-223	ENST00000598717	NEUROD1	Q13562	356 aa		28.04	■■■□□ 2.08
LTBP4-223	ENST00000598717	SPATA31D1	Q6ZQQ2	1576 aa		28.03	■■■□□ 2.08
LTBP4-223	ENST00000598717	KDM4F	A0A1W2PPD8	638 aa		28.02	■■■□□ 2.08
LTBP4-223	ENST00000598717	PTPRM	P28827	1452 aa		28.02	■■■□□ 2.08
LTBP4-223	ENST00000598717	SLC52A1	Q9NWF4	448 aa		28.01	■■■□□ 2.07
LTBP4-223	ENST00000598717	TNR	Q92752	1358 aa		27.99	■■■□□ 2.07
LTBP4-223	ENST00000598717	SYNM	O15061	1565 aa		27.98	■■■□□ 2.07
LTBP4-223	ENST00000598717	UGGT1	Q9NYU2	1555 aa		27.94	■■■□□ 2.06
LTBP4-223	ENST00000598717	CLTCL1	P53675	1640 aa		27.94	■■■□□ 2.06
LTBP4-223	ENST00000598717	IDI1	Q13907	227 aa		27.94	■■■□□ 2.06
LTBP4-223	ENST00000598717	CHGA	P10645	457 aa	Known RBP	27.92	■■■□□ 2.06
LTBP4-223	ENST00000598717	STAG3	Q9UJ98	1225 aa		27.9	■■■□□ 2.06
LTBP4-223	ENST00000598717	PIK3C2B	O00750	1634 aa		27.89	■■■□□ 2.06
LTBP4-223	ENST00000598717	TONSL	Q96HA7	1378 aa		27.88	■■■□□ 2.05
LTBP4-223	ENST00000598717	NLRP1	Q9C000	1473 aa		27.87	■■■□□ 2.05
LTBP4-223	ENST00000598717	RGL3	Q3MIN7	710 aa		27.86	■■■□□ 2.05
LTBP4-223	ENST00000598717	TIMELESS	Q9UNS1	1208 aa		27.85	■■■□□ 2.05
LTBP4-223	ENST00000598717	KIF1B	O60333	1816 aa		27.84	■■■□□ 2.05
LTBP4-223	ENST00000598717	ZEB1	P37275	1124 aa	Predicted RBP	27.82	■■■□□ 2.04
LTBP4-223	ENST00000598717	ZNF326	Q5BKZ1	582 aa	Known RBP	27.82	■■■□□ 2.04
LTBP4-223	ENST00000598717	SPATA31E1	Q6ZUB1	1445 aa		27.82	■■■□□ 2.04
LTBP4-223	ENST00000598717	SETD1B	Q9UPS6	1966 aa	Known RBP	27.79	■■■□□ 2.04
LTBP4-223	ENST00000598717	MYO3A	Q8NEV4	1616 aa		27.79	■■■□□ 2.04
LTBP4-223	ENST00000598717	ADGRB3	O60242	1522 aa		27.79	■■■□□ 2.04
LTBP4-223	ENST00000598717	L3MBTL2	Q969R5	705 aa		27.79	■■■□□ 2.04
LTBP4-223	ENST00000598717	NEURL4	Q96JN8	1562 aa		27.78	■■■□□ 2.04
LTBP4-223	ENST00000598717	A2ML1	A8K2U0	1454 aa		27.77	■■■□□ 2.04
LTBP4-223	ENST00000598717	UHRF1BP1	Q6BDS2	1440 aa		27.77	■■■□□ 2.04
LTBP4-223	ENST00000598717	TMEM131L	A2VDJ0	1609 aa		27.76	■■■□□ 2.03
LTBP4-223	ENST00000598717	RPGRIP1L	Q68CZ1	1315 aa		27.74	■■■□□ 2.03
LTBP4-223	ENST00000598717	DCAF11	Q8TEB1	546 aa		27.74	■■■□□ 2.03
LTBP4-223	ENST00000598717	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	27.73	■■■□□ 2.03
LTBP4-223	ENST00000598717	THEMIS	Q8N1K5	641 aa	Predicted RBP	27.73	■■■□□ 2.03
LTBP4-223	ENST00000598717	KDM5A	P29375	1690 aa	Known RBP	27.72	■■■□□ 2.03
LTBP4-223	ENST00000598717	KDM2A	Q9Y2K7	1162 aa		27.71	■■■□□ 2.03
LTBP4-223	ENST00000598717	UBR1	Q8IWV7	1749 aa		27.7	■■■□□ 2.03
LTBP4-223	ENST00000598717	HDGF	P51858	240 aa	Known RBP	27.69	■■■□□ 2.02
LTBP4-223	ENST00000598717	STAC3	Q96MF2	364 aa		27.69	■■■□□ 2.02
LTBP4-223	ENST00000598717	ZNF142	P52746	1687 aa	Predicted RBP	27.68	■■■□□ 2.02
LTBP4-223	ENST00000598717	MYO5B	Q9ULV0	1848 aa		27.67	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms