RNA–Protein interactions for RNA: ENST00000598073.5

GRAMD1A-206, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-206ENST00000598073 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.4
GRAMD1A-206ENST00000598073 GGT6Q6P531 493 aa17.57■□□□□ 0.4
GRAMD1A-206ENST00000598073 MROH2AA6NES4 1674 aa17.57■□□□□ 0.4
GRAMD1A-206ENST00000598073 CNTLNQ9NXG0 1405 aa17.56■□□□□ 0.4
GRAMD1A-206ENST00000598073 FAM135AQ9P2D6 1515 aa17.56■□□□□ 0.4
GRAMD1A-206ENST00000598073 CLTCQ00610 1675 aaKnown RBP17.55■□□□□ 0.4
GRAMD1A-206ENST00000598073 DEPDC5O75140 1603 aa17.55■□□□□ 0.4
GRAMD1A-206ENST00000598073 ITGAEP38570 1179 aa17.55■□□□□ 0.4
GRAMD1A-206ENST00000598073 C3P01024 1663 aa17.55■□□□□ 0.4
GRAMD1A-206ENST00000598073 ANKRD50Q9ULJ7 1429 aa17.54■□□□□ 0.4
GRAMD1A-206ENST00000598073 PRDM15P57071 1507 aaPredicted RBP17.52■□□□□ 0.4
GRAMD1A-206ENST00000598073 KDM5DQ9BY66 1539 aa17.52■□□□□ 0.4
GRAMD1A-206ENST00000598073 CEBPAP49715 358 aaPredicted RBP17.51■□□□□ 0.39
GRAMD1A-206ENST00000598073 SETD1BQ9UPS6 1966 aaKnown RBP17.51■□□□□ 0.39
GRAMD1A-206ENST00000598073 ZMYM3Q14202 1370 aa17.51■□□□□ 0.39
GRAMD1A-206ENST00000598073 ESF1Q9H501 851 aaKnown RBP17.5■□□□□ 0.39
GRAMD1A-206ENST00000598073 ABCC3O15438 1527 aa17.5■□□□□ 0.39
GRAMD1A-206ENST00000598073 VWDEQ8N2E2 1590 aa17.49■□□□□ 0.39
GRAMD1A-206ENST00000598073 ZC3H13Q5T200 1668 aaKnown RBP17.49■□□□□ 0.39
GRAMD1A-206ENST00000598073 NAIPQ13075 1403 aa17.47■□□□□ 0.39
GRAMD1A-206ENST00000598073 CEP152O94986 1710 aa17.47■□□□□ 0.39
GRAMD1A-206ENST00000598073 GCC2Q8IWJ2 1684 aa17.47■□□□□ 0.39
GRAMD1A-206ENST00000598073 WASHC2CQ9Y4E1 1318 aa17.47■□□□□ 0.39
GRAMD1A-206ENST00000598073 UNC13BO14795 1591 aa17.46■□□□□ 0.39
GRAMD1A-206ENST00000598073 HFM1A2PYH4 1435 aa17.46■□□□□ 0.39
GRAMD1A-206ENST00000598073 NPATQ14207 1427 aa17.45■□□□□ 0.38
GRAMD1A-206ENST00000598073 LMTK2Q8IWU2 1503 aa17.44■□□□□ 0.38
GRAMD1A-206ENST00000598073 PZPP20742 1482 aa17.44■□□□□ 0.38
GRAMD1A-206ENST00000598073 CAMSAP1Q5T5Y3 1602 aa17.43■□□□□ 0.38
GRAMD1A-206ENST00000598073 PLPPR3Q6T4P5 718 aa17.43■□□□□ 0.38
GRAMD1A-206ENST00000598073 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.42■□□□□ 0.381e-7■■□□□ 12.2
GRAMD1A-206ENST00000598073 PREX1Q8TCU6 1659 aa17.42■□□□□ 0.38
GRAMD1A-206ENST00000598073 ARHGAP31Q2M1Z3 1444 aa17.41■□□□□ 0.38
GRAMD1A-206ENST00000598073 LMTK3Q96Q04 1460 aa17.41■□□□□ 0.38
GRAMD1A-206ENST00000598073 KANK1Q14678 1352 aa17.4■□□□□ 0.38
GRAMD1A-206ENST00000598073 CFAP65Q6ZU64 1925 aaKnown RBP17.39■□□□□ 0.37
GRAMD1A-206ENST00000598073 FBXO31Q5XUX0 539 aaPredicted RBP17.39■□□□□ 0.37
GRAMD1A-206ENST00000598073 IQGAP3Q86VI3 1631 aa17.39■□□□□ 0.37
GRAMD1A-206ENST00000598073 TET3O43151 1660 aa17.37■□□□□ 0.37
GRAMD1A-206ENST00000598073 EFCAB6Q5THR3 1501 aa17.37■□□□□ 0.37
GRAMD1A-206ENST00000598073 SPATA31D1Q6ZQQ2 1576 aa17.36■□□□□ 0.37
GRAMD1A-206ENST00000598073 ERVK-7P63135 1459 aa17.35■□□□□ 0.37
GRAMD1A-206ENST00000598073 MYO3AQ8NEV4 1616 aa17.35■□□□□ 0.37
GRAMD1A-206ENST00000598073 NUP155O75694 1391 aa17.34■□□□□ 0.37
GRAMD1A-206ENST00000598073 UHRF1BP1Q6BDS2 1440 aa17.34■□□□□ 0.37
GRAMD1A-206ENST00000598073 ZNF142P52746 1687 aaPredicted RBP17.33■□□□□ 0.37
GRAMD1A-206ENST00000598073 TNRQ92752 1358 aa17.33■□□□□ 0.36
GRAMD1A-206ENST00000598073 E9PCH4 1651 aa17.32■□□□□ 0.36
GRAMD1A-206ENST00000598073 RPRD2Q5VT52 1461 aaKnown RBP17.31■□□□□ 0.36
GRAMD1A-206ENST00000598073 NOS1P29475 1434 aa17.3■□□□□ 0.36
GRAMD1A-206ENST00000598073 SETD5Q9C0A6 1442 aa17.3■□□□□ 0.36
GRAMD1A-206ENST00000598073 CEP170BQ9Y4F5 1589 aaPredicted RBP17.3■□□□□ 0.36
GRAMD1A-206ENST00000598073 A2ML1A8K2U0 1454 aa17.29■□□□□ 0.36
GRAMD1A-206ENST00000598073 HSPA2P54652 639 aa17.28■□□□□ 0.36
GRAMD1A-206ENST00000598073 NLRP1Q9C000 1473 aa17.28■□□□□ 0.36
GRAMD1A-206ENST00000598073 SYNMO15061 1565 aa17.28■□□□□ 0.36
GRAMD1A-206ENST00000598073 RAB3GAP2Q9H2M9 1393 aa17.25■□□□□ 0.35
GRAMD1A-206ENST00000598073 STRCQ7RTU9 1775 aa17.24■□□□□ 0.35
GRAMD1A-206ENST00000598073 TRIM52Q96A61 297 aa17.23■□□□□ 0.35
GRAMD1A-206ENST00000598073 ACIN1Q9UKV3 1341 aaKnown RBP17.21■□□□□ 0.35
GRAMD1A-206ENST00000598073 PTPRTO14522 1441 aa17.21■□□□□ 0.35
GRAMD1A-206ENST00000598073 PIK3C2BO00750 1634 aa17.21■□□□□ 0.35
GRAMD1A-206ENST00000598073 UBR1Q8IWV7 1749 aa17.21■□□□□ 0.35
GRAMD1A-206ENST00000598073 HRCP23327 699 aa17.21■□□□□ 0.35
GRAMD1A-206ENST00000598073 KDM5AP29375 1690 aaKnown RBP17.2■□□□□ 0.34
GRAMD1A-206ENST00000598073 UGGT1Q9NYU2 1555 aa17.2■□□□□ 0.34
GRAMD1A-206ENST00000598073 PLA2R1Q13018 1463 aa17.2■□□□□ 0.34
GRAMD1A-206ENST00000598073 IDI1Q13907 227 aa17.2■□□□□ 0.34
GRAMD1A-206ENST00000598073 SPHKAPQ2M3C7 1700 aa17.2■□□□□ 0.34
GRAMD1A-206ENST00000598073 PKD2Q13563 968 aa17.18■□□□□ 0.34
GRAMD1A-206ENST00000598073 SLC4A1APQ9BWU0 796 aaKnown RBP17.18■□□□□ 0.34
GRAMD1A-206ENST00000598073 SLC52A1Q9NWF4 448 aa17.18■□□□□ 0.34
GRAMD1A-206ENST00000598073 MPHOSPH9Q99550 1183 aa17.17■□□□□ 0.34
GRAMD1A-206ENST00000598073 TRIM26Q12899 539 aaPredicted RBP17.16■□□□□ 0.34
GRAMD1A-206ENST00000598073 THEMISQ8N1K5 641 aaPredicted RBP17.16■□□□□ 0.34
GRAMD1A-206ENST00000598073 MYO5BQ9ULV0 1848 aa17.15■□□□□ 0.34
GRAMD1A-206ENST00000598073 TRPM2O94759 1503 aa17.15■□□□□ 0.34
GRAMD1A-206ENST00000598073 ARHGAP23Q9P227 1491 aa17.14■□□□□ 0.33
GRAMD1A-206ENST00000598073 ADGRB3O60242 1522 aa17.14■□□□□ 0.33
GRAMD1A-206ENST00000598073 TMEM131LA2VDJ0 1609 aa17.14■□□□□ 0.33
GRAMD1A-206ENST00000598073 SLIT1O75093 1534 aa17.13■□□□□ 0.33
GRAMD1A-206ENST00000598073 POLR1AO95602 1720 aaPredicted RBP17.13■□□□□ 0.33
GRAMD1A-206ENST00000598073 CLTCL1P53675 1640 aa17.12■□□□□ 0.33
GRAMD1A-206ENST00000598073 NEURL4Q96JN8 1562 aa17.11■□□□□ 0.33
GRAMD1A-206ENST00000598073 FOXD1Q16676 465 aa17.11■□□□□ 0.33
GRAMD1A-206ENST00000598073 NCKAP5LQ9HCH0 1330 aa17.11■□□□□ 0.33
GRAMD1A-206ENST00000598073 TMEM2Q9UHN6 1383 aa17.1■□□□□ 0.33
GRAMD1A-206ENST00000598073 MED14O60244 1454 aa17.08■□□□□ 0.32
GRAMD1A-206ENST00000598073 ANKLE2Q86XL3 938 aa17.07■□□□□ 0.32
GRAMD1A-206ENST00000598073 DMRT2Q9Y5R5 561 aa17.07■□□□□ 0.32
GRAMD1A-206ENST00000598073 ZFYVE9O95405 1425 aa17.06■□□□□ 0.32
GRAMD1A-206ENST00000598073 KIF1BO60333 1816 aa17.06■□□□□ 0.32
GRAMD1A-206ENST00000598073 LTKP29376 864 aa17.06■□□□□ 0.32
GRAMD1A-206ENST00000598073 STAG3Q9UJ98 1225 aa17.06■□□□□ 0.32
GRAMD1A-206ENST00000598073 SCAF11Q99590 1463 aaKnown RBP17.05■□□□□ 0.32
GRAMD1A-206ENST00000598073 TXNDC2Q86VQ3 553 aa17.03■□□□□ 0.32
GRAMD1A-206ENST00000598073 IQGAP1P46940 1657 aa17.03■□□□□ 0.32
GRAMD1A-206ENST00000598073 NPHP4O75161 1426 aaPredicted RBP17.03■□□□□ 0.32
GRAMD1A-206ENST00000598073 ANKRD30BQ9BXX2 1392 aa17.02■□□□□ 0.32
GRAMD1A-206ENST00000598073 RIMS2Q9UQ26 1411 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms