RNA–Protein interactions for RNA: ENST00000597573.1

PDE4C-212, Transcript of phosphodiesterase 4C, humanhuman

TSL 2

Gene PDE4C, Length 603 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-212ENST00000597573 DHX57Q6P158 1386 aaKnown RBP23.02■■□□□ 1.28
PDE4C-212ENST00000597573 TRIM52Q96A61 297 aa23.01■■□□□ 1.27
PDE4C-212ENST00000597573 AGLP35573 1532 aa23■■□□□ 1.27
PDE4C-212ENST00000597573 PZPP20742 1482 aa22.98■■□□□ 1.27
PDE4C-212ENST00000597573 PRDM15P57071 1507 aaPredicted RBP22.98■■□□□ 1.27
PDE4C-212ENST00000597573 MROH1Q8NDA8 1641 aa22.98■■□□□ 1.27
PDE4C-212ENST00000597573 KIF3BO15066 747 aa22.98■■□□□ 1.27
PDE4C-212ENST00000597573 IQGAP3Q86VI3 1631 aa22.97■■□□□ 1.27
PDE4C-212ENST00000597573 NUP155O75694 1391 aa22.97■■□□□ 1.27
PDE4C-212ENST00000597573 VWDEQ8N2E2 1590 aa22.95■■□□□ 1.26
PDE4C-212ENST00000597573 FAM135AQ9P2D6 1515 aa22.94■■□□□ 1.26
PDE4C-212ENST00000597573 CCER1Q8TC90 406 aaPredicted RBP22.94■■□□□ 1.26
PDE4C-212ENST00000597573 SIGLEC1Q9BZZ2 1709 aa22.94■■□□□ 1.26
PDE4C-212ENST00000597573 KANK1Q14678 1352 aa22.91■■□□□ 1.26
PDE4C-212ENST00000597573 MPHOSPH9Q99550 1183 aa22.91■■□□□ 1.26
PDE4C-212ENST00000597573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.9■■□□□ 1.26
PDE4C-212ENST00000597573 SLC4A1APQ9BWU0 796 aaKnown RBP22.89■■□□□ 1.25
PDE4C-212ENST00000597573 CLSPNQ9HAW4 1339 aa22.88■■□□□ 1.25
PDE4C-212ENST00000597573 LMTK2Q8IWU2 1503 aa22.87■■□□□ 1.25
PDE4C-212ENST00000597573 TET3O43151 1660 aa22.87■■□□□ 1.25
PDE4C-212ENST00000597573 ZC3H13Q5T200 1668 aaKnown RBP22.86■■□□□ 1.25
PDE4C-212ENST00000597573 ABCC3O15438 1527 aa22.84■■□□□ 1.25
PDE4C-212ENST00000597573 GGT6Q6P531 493 aa22.84■■□□□ 1.25
PDE4C-212ENST00000597573 CEP152O94986 1710 aa22.84■■□□□ 1.25
PDE4C-212ENST00000597573 PKD2Q13563 968 aa22.81■■□□□ 1.24
PDE4C-212ENST00000597573 EFCAB6Q5THR3 1501 aa22.81■■□□□ 1.24
PDE4C-212ENST00000597573 PPP6R1Q9UPN7 881 aa22.8■■□□□ 1.24
PDE4C-212ENST00000597573 E9PCH4 1651 aa22.78■■□□□ 1.24
PDE4C-212ENST00000597573 CAMSAP1Q5T5Y3 1602 aa22.78■■□□□ 1.24
PDE4C-212ENST00000597573 ARID4BQ4LE39 1312 aaPredicted RBP22.78■■□□□ 1.24
PDE4C-212ENST00000597573 WASHC2CQ9Y4E1 1318 aa22.77■■□□□ 1.24
PDE4C-212ENST00000597573 ANKRD30BQ9BXX2 1392 aa22.76■■□□□ 1.23
PDE4C-212ENST00000597573 FOXD1Q16676 465 aa22.75■■□□□ 1.23
PDE4C-212ENST00000597573 RPRD2Q5VT52 1461 aaKnown RBP22.74■■□□□ 1.23
PDE4C-212ENST00000597573 CLTCQ00610 1675 aaKnown RBP22.72■■□□□ 1.23
PDE4C-212ENST00000597573 MLECQ14165 292 aa22.72■■□□□ 1.23
PDE4C-212ENST00000597573 ARHGAP31Q2M1Z3 1444 aa22.72■■□□□ 1.23
PDE4C-212ENST00000597573 NPATQ14207 1427 aa22.7■■□□□ 1.22
PDE4C-212ENST00000597573 SPHKAPQ2M3C7 1700 aa22.69■■□□□ 1.22
PDE4C-212ENST00000597573 CNTLNQ9NXG0 1405 aa22.69■■□□□ 1.22
PDE4C-212ENST00000597573 PTPRTO14522 1441 aa22.68■■□□□ 1.22
PDE4C-212ENST00000597573 MROH2AA6NES4 1674 aa22.68■■□□□ 1.22
PDE4C-212ENST00000597573 TRPM2O94759 1503 aa22.67■■□□□ 1.22
PDE4C-212ENST00000597573 PLA2R1Q13018 1463 aa22.67■■□□□ 1.22
PDE4C-212ENST00000597573 FER1L4A9Z1Z3 1794 aa22.66■■□□□ 1.22
PDE4C-212ENST00000597573 ZEB1P37275 1124 aaPredicted RBP22.65■■□□□ 1.22
PDE4C-212ENST00000597573 ESF1Q9H501 851 aaKnown RBP22.65■■□□□ 1.22
PDE4C-212ENST00000597573 SIN3AQ96ST3 1273 aa22.64■■□□□ 1.21
PDE4C-212ENST00000597573 ADAMTSL3P82987 1691 aa22.62■■□□□ 1.21
PDE4C-212ENST00000597573 PREX1Q8TCU6 1659 aa22.62■■□□□ 1.21
PDE4C-212ENST00000597573 CCDC144AA2RUR9 1427 aa22.61■■□□□ 1.21
PDE4C-212ENST00000597573 NOS1P29475 1434 aa22.61■■□□□ 1.21
PDE4C-212ENST00000597573 NEUROD1Q13562 356 aa22.59■■□□□ 1.21
PDE4C-212ENST00000597573 MADDQ8WXG6 1647 aa22.59■■□□□ 1.21
PDE4C-212ENST00000597573 ERVK-7P63135 1459 aa22.59■■□□□ 1.21
PDE4C-212ENST00000597573 CLTCL1P53675 1640 aa22.58■■□□□ 1.21
PDE4C-212ENST00000597573 ZMYM3Q14202 1370 aa22.58■■□□□ 1.21
PDE4C-212ENST00000597573 SYNMO15061 1565 aa22.57■■□□□ 1.2
PDE4C-212ENST00000597573 SPATA31D1Q6ZQQ2 1576 aa22.57■■□□□ 1.2
PDE4C-212ENST00000597573 CFAP65Q6ZU64 1925 aaKnown RBP22.57■■□□□ 1.2
PDE4C-212ENST00000597573 RIMS1Q86UR5 1692 aaKnown RBP22.55■■□□□ 1.2
PDE4C-212ENST00000597573 PIK3C2BO00750 1634 aa22.54■■□□□ 1.2
PDE4C-212ENST00000597573 TIMELESSQ9UNS1 1208 aa22.54■■□□□ 1.2
PDE4C-212ENST00000597573 C3P01024 1663 aa22.54■■□□□ 1.2
PDE4C-212ENST00000597573 TONSLQ96HA7 1378 aa22.53■■□□□ 1.2
PDE4C-212ENST00000597573 UGGT1Q9NYU2 1555 aa22.53■■□□□ 1.2
PDE4C-212ENST00000597573 NEURL4Q96JN8 1562 aa22.5■■□□□ 1.19
PDE4C-212ENST00000597573 FBXO31Q5XUX0 539 aaPredicted RBP22.49■■□□□ 1.19
PDE4C-212ENST00000597573 KIF1BO60333 1816 aa22.48■■□□□ 1.19
PDE4C-212ENST00000597573 SPATA31E1Q6ZUB1 1445 aa22.48■■□□□ 1.19
PDE4C-212ENST00000597573 SLC52A1Q9NWF4 448 aa22.47■■□□□ 1.19
PDE4C-212ENST00000597573 ADGRB3O60242 1522 aa22.46■■□□□ 1.19
PDE4C-212ENST00000597573 TNRQ92752 1358 aa22.45■■□□□ 1.18
PDE4C-212ENST00000597573 L3MBTL2Q969R5 705 aa22.42■■□□□ 1.18
PDE4C-212ENST00000597573 CEBPAP49715 358 aaPredicted RBP22.41■■□□□ 1.18
PDE4C-212ENST00000597573 IDI1Q13907 227 aa22.4■■□□□ 1.18
PDE4C-212ENST00000597573 TMEM131LA2VDJ0 1609 aa22.39■■□□□ 1.18
PDE4C-212ENST00000597573 PTPRMP28827 1452 aa22.39■■□□□ 1.17
PDE4C-212ENST00000597573 NLRP1Q9C000 1473 aa22.39■■□□□ 1.17
PDE4C-212ENST00000597573 KDM5AP29375 1690 aaKnown RBP22.37■■□□□ 1.17
PDE4C-212ENST00000597573 PPP1R15AO75807 674 aaPredicted RBP22.36■■□□□ 1.17
PDE4C-212ENST00000597573 RGL3Q3MIN7 710 aa22.36■■□□□ 1.17
PDE4C-212ENST00000597573 MYO3AQ8NEV4 1616 aa22.35■■□□□ 1.17
PDE4C-212ENST00000597573 IFT172Q9UG01 1749 aa22.34■■□□□ 1.17
PDE4C-212ENST00000597573 CHGAP10645 457 aaKnown RBP22.34■■□□□ 1.17
PDE4C-212ENST00000597573 MYO5BQ9ULV0 1848 aa22.34■■□□□ 1.17
PDE4C-212ENST00000597573 PLPPR3Q6T4P5 718 aa22.32■■□□□ 1.16
PDE4C-212ENST00000597573 A2ML1A8K2U0 1454 aa22.32■■□□□ 1.16
PDE4C-212ENST00000597573 PPLO60437 1756 aa22.31■■□□□ 1.16
PDE4C-212ENST00000597573 DCAF11Q8TEB1 546 aa22.31■■□□□ 1.16
PDE4C-212ENST00000597573 UBR1Q8IWV7 1749 aa22.31■■□□□ 1.16
PDE4C-212ENST00000597573 UHRF1BP1Q6BDS2 1440 aa22.31■■□□□ 1.16
PDE4C-212ENST00000597573 RPGRIP1LQ68CZ1 1315 aa22.31■■□□□ 1.16
PDE4C-212ENST00000597573 MYOM2P54296 1465 aa22.3■■□□□ 1.16
PDE4C-212ENST00000597573 STAC3Q96MF2 364 aa22.3■■□□□ 1.16
PDE4C-212ENST00000597573 NEXMIFQ5QGS0 1516 aa22.3■■□□□ 1.16
PDE4C-212ENST00000597573 ZNF326Q5BKZ1 582 aaKnown RBP22.29■■□□□ 1.16
PDE4C-212ENST00000597573 ZNF142P52746 1687 aaPredicted RBP22.29■■□□□ 1.16
PDE4C-212ENST00000597573 SETD1BQ9UPS6 1966 aaKnown RBP22.29■■□□□ 1.16
PDE4C-212ENST00000597573 KDM4FA0A1W2PPD8 638 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms