RNA–Protein interactions for RNA: ENST00000596467.5

FARP1-217, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-217ENST00000596467 INO80Q9ULG1 1556 aaPredicted RBP13.88□□□□□ -0.19
FARP1-217ENST00000596467 SHANK2Q9UPX8 1470 aa13.87□□□□□ -0.19
FARP1-217ENST00000596467 ALKQ9UM73 1620 aa13.86□□□□□ -0.19
FARP1-217ENST00000596467 ATP7AQ04656 1500 aa13.86□□□□□ -0.19
FARP1-217ENST00000596467 PIP4K2BP78356 416 aa13.86□□□□□ -0.19
FARP1-217ENST00000596467 CACNB1Q02641 598 aaPredicted RBP13.85□□□□□ -0.19
FARP1-217ENST00000596467 CCDC18Q5T9S5 1454 aa13.85□□□□□ -0.19
FARP1-217ENST00000596467 SYCP2Q9BX26 1530 aa13.84□□□□□ -0.19
FARP1-217ENST00000596467 VWDEQ8N2E2 1590 aa13.83□□□□□ -0.19
FARP1-217ENST00000596467 A2MP01023 1474 aa13.83□□□□□ -0.2
FARP1-217ENST00000596467 DEPDC5O75140 1603 aa13.82□□□□□ -0.2
FARP1-217ENST00000596467 RNF39Q9H2S5 420 aa13.82□□□□□ -0.2
FARP1-217ENST00000596467 SPAG9O60271 1321 aaKnown RBP13.82□□□□□ -0.2
FARP1-217ENST00000596467 KIAA1107Q9UPP5 1409 aa13.81□□□□□ -0.2
FARP1-217ENST00000596467 STRCP1A6NGW2 1772 aa13.8□□□□□ -0.2
FARP1-217ENST00000596467 MED14O60244 1454 aa13.8□□□□□ -0.2
FARP1-217ENST00000596467 PLEKHH2Q8IVE3 1493 aa13.8□□□□□ -0.2
FARP1-217ENST00000596467 RNF17Q9BXT8 1623 aaKnown RBP13.79□□□□□ -0.2
FARP1-217ENST00000596467 FAM135AQ9P2D6 1515 aa13.79□□□□□ -0.2
FARP1-217ENST00000596467 SYNMO15061 1565 aa13.79□□□□□ -0.2
FARP1-217ENST00000596467 IQGAP1P46940 1657 aa13.79□□□□□ -0.2
FARP1-217ENST00000596467 CASKIN1Q8WXD9 1431 aa13.78□□□□□ -0.2
FARP1-217ENST00000596467 GGT6Q6P531 493 aa13.77□□□□□ -0.21
FARP1-217ENST00000596467 GPATCH8Q9UKJ3 1502 aaKnown RBP13.77□□□□□ -0.21
FARP1-217ENST00000596467 PZPP20742 1482 aa13.74□□□□□ -0.21
FARP1-217ENST00000596467 TNRQ92752 1358 aa13.74□□□□□ -0.21
FARP1-217ENST00000596467 UBTFP17480 764 aaKnown RBP13.74□□□□□ -0.21
FARP1-217ENST00000596467 HNRNPMP52272 730 aaKnown RBP eCLIP13.74□□□□□ -0.21
FARP1-217ENST00000596467 ANKLE2Q86XL3 938 aa13.74□□□□□ -0.21
FARP1-217ENST00000596467 NLRP1Q9C000 1473 aa13.74□□□□□ -0.21
FARP1-217ENST00000596467 RGS17Q9UGC6 210 aaPredicted RBP13.73□□□□□ -0.21
FARP1-217ENST00000596467 ZNF777Q9ULD5 760 aaPredicted RBP13.73□□□□□ -0.21
FARP1-217ENST00000596467 LRRC7Q96NW7 1537 aa13.73□□□□□ -0.21
FARP1-217ENST00000596467 XIRP1Q702N8 1843 aaKnown RBP13.73□□□□□ -0.21
FARP1-217ENST00000596467 NPHP4O75161 1426 aaPredicted RBP13.73□□□□□ -0.21
FARP1-217ENST00000596467 UGGT1Q9NYU2 1555 aa13.72□□□□□ -0.21
FARP1-217ENST00000596467 THEMISQ8N1K5 641 aaPredicted RBP13.72□□□□□ -0.21
FARP1-217ENST00000596467 KDM5DQ9BY66 1539 aa13.72□□□□□ -0.21
FARP1-217ENST00000596467 FYCO1Q9BQS8 1478 aa13.72□□□□□ -0.21
FARP1-217ENST00000596467 ZC3H13Q5T200 1668 aaKnown RBP13.71□□□□□ -0.21
FARP1-217ENST00000596467 RTEL1-TNFRSF6BF6WH68 1400 aa13.71□□□□□ -0.22
FARP1-217ENST00000596467 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.71□□□□□ -0.22
FARP1-217ENST00000596467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.7□□□□□ -0.227e-13■□□□□ 8.5
FARP1-217ENST00000596467 MIA2Q96PC5 1412 aa13.68□□□□□ -0.22
FARP1-217ENST00000596467 CFDP1Q9UEE9 299 aaPredicted RBP13.68□□□□□ -0.22
FARP1-217ENST00000596467 DHX29Q7Z478 1369 aaKnown RBP13.68□□□□□ -0.22
FARP1-217ENST00000596467 FBXO31Q5XUX0 539 aaPredicted RBP13.67□□□□□ -0.22
FARP1-217ENST00000596467 MBD5Q9P267 1494 aa13.66□□□□□ -0.22
FARP1-217ENST00000596467 CCNB3Q8WWL7 1395 aa13.65□□□□□ -0.22
FARP1-217ENST00000596467 CFAP65Q6ZU64 1925 aaKnown RBP13.64□□□□□ -0.23
FARP1-217ENST00000596467 UBR1Q8IWV7 1749 aa13.64□□□□□ -0.23
FARP1-217ENST00000596467 SETD1AO15047 1707 aaKnown RBP13.63□□□□□ -0.23
FARP1-217ENST00000596467 TIAM1Q13009 1591 aa13.62□□□□□ -0.23
FARP1-217ENST00000596467 SLC4A2P04920 1241 aa13.62□□□□□ -0.23
FARP1-217ENST00000596467 FAM135BQ49AJ0 1406 aa13.62□□□□□ -0.23
FARP1-217ENST00000596467 WASHC2CQ9Y4E1 1318 aa13.62□□□□□ -0.23
FARP1-217ENST00000596467 KIF3BO15066 747 aa13.61□□□□□ -0.23
FARP1-217ENST00000596467 POTEAQ6S8J7 498 aa13.61□□□□□ -0.23
FARP1-217ENST00000596467 C1QBPQ07021 282 aaKnown RBP13.58□□□□□ -0.24
FARP1-217ENST00000596467 ROBO1Q9Y6N7 1651 aa13.58□□□□□ -0.24
FARP1-217ENST00000596467 CCDC141Q6ZP82 1450 aa13.57□□□□□ -0.24
FARP1-217ENST00000596467 ZNF644Q9H582 1327 aaPredicted RBP13.57□□□□□ -0.24
FARP1-217ENST00000596467 SCAF11Q99590 1463 aaKnown RBP13.56□□□□□ -0.24
FARP1-217ENST00000596467 SLIT1O75093 1534 aa13.56□□□□□ -0.24
FARP1-217ENST00000596467 MTUS2Q5JR59 1369 aa13.56□□□□□ -0.24
FARP1-217ENST00000596467 ARHGAP23Q9P227 1491 aa13.55□□□□□ -0.24
FARP1-217ENST00000596467 EIF2AK4Q9P2K8 1649 aaKnown RBP13.55□□□□□ -0.24
FARP1-217ENST00000596467 RSPH4AQ5TD94 716 aa13.55□□□□□ -0.24
FARP1-217ENST00000596467 ERVK-7P63135 1459 aa13.55□□□□□ -0.24
FARP1-217ENST00000596467 ABCC3O15438 1527 aa13.54□□□□□ -0.24
FARP1-217ENST00000596467 EHBP1L1Q8N3D4 1523 aa13.54□□□□□ -0.24
FARP1-217ENST00000596467 CEP152O94986 1710 aa13.54□□□□□ -0.24
FARP1-217ENST00000596467 ARHGEF5Q12774 1597 aa13.54□□□□□ -0.24
FARP1-217ENST00000596467 KDM5AP29375 1690 aaKnown RBP13.53□□□□□ -0.24
FARP1-217ENST00000596467 PHLPP1O60346 1717 aa13.53□□□□□ -0.24
FARP1-217ENST00000596467 SRCAPQ6ZRS2 3230 aa13.52□□□□□ -0.24
FARP1-217ENST00000596467 CEP162Q5TB80 1403 aa13.52□□□□□ -0.25
FARP1-217ENST00000596467 NCOA2Q15596 1464 aa13.52□□□□□ -0.25
FARP1-217ENST00000596467 LRRC9Q6ZRR7 1453 aa13.52□□□□□ -0.25
FARP1-217ENST00000596467 MROH1Q8NDA8 1641 aa13.5□□□□□ -0.25
FARP1-217ENST00000596467 CAMSAP2Q08AD1 1489 aa13.5□□□□□ -0.25
FARP1-217ENST00000596467 MAP3K1Q13233 1512 aa13.49□□□□□ -0.25
FARP1-217ENST00000596467 MAST1Q9Y2H9 1570 aa13.49□□□□□ -0.25
FARP1-217ENST00000596467 LTKP29376 864 aa13.48□□□□□ -0.25
FARP1-217ENST00000596467 TXNDC2Q86VQ3 553 aa13.47□□□□□ -0.25
FARP1-217ENST00000596467 UPF1Q92900 1129 aaKnown RBP eCLIP13.47□□□□□ -0.25
FARP1-217ENST00000596467 PIK3C2BO00750 1634 aa13.46□□□□□ -0.25
FARP1-217ENST00000596467 TMEM94Q12767 1356 aa13.46□□□□□ -0.25
FARP1-217ENST00000596467 JCADQ9P266 1359 aa13.45□□□□□ -0.26
FARP1-217ENST00000596467 NWD1Q149M9 1564 aa13.45□□□□□ -0.26
FARP1-217ENST00000596467 TET3O43151 1660 aa13.45□□□□□ -0.26
FARP1-217ENST00000596467 MYCNP04198 464 aaPredicted RBP13.45□□□□□ -0.26
FARP1-217ENST00000596467 EID1Q9Y6B2 187 aa13.45□□□□□ -0.26
FARP1-217ENST00000596467 COL16A1Q07092 1604 aaPredicted RBP13.45□□□□□ -0.26
FARP1-217ENST00000596467 ARHGAP31Q2M1Z3 1444 aa13.45□□□□□ -0.26
FARP1-217ENST00000596467 PRDM15P57071 1507 aaPredicted RBP13.44□□□□□ -0.26
FARP1-217ENST00000596467 NKTRP30414 1462 aaKnown RBP13.44□□□□□ -0.26
FARP1-217ENST00000596467 SHPRHQ149N8 1683 aa13.44□□□□□ -0.26
FARP1-217ENST00000596467 CHD2O14647 1828 aaKnown RBP13.43□□□□□ -0.26
FARP1-217ENST00000596467 TSPY4P0CV99 314 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms