RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 CNTLNQ9NXG0 1405 aa23.48■■□□□ 1.35
USE1-206ENST00000595101 PPP6R1Q9UPN7 881 aa23.47■■□□□ 1.35
USE1-206ENST00000595101 WASHC2CQ9Y4E1 1318 aa23.47■■□□□ 1.35
USE1-206ENST00000595101 CLTCQ00610 1675 aaKnown RBP23.46■■□□□ 1.35
USE1-206ENST00000595101 ERBINQ96RT1 1412 aa23.45■■□□□ 1.34
USE1-206ENST00000595101 C3P01024 1663 aa23.45■■□□□ 1.34
USE1-206ENST00000595101 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.45■■□□□ 1.34
USE1-206ENST00000595101 MROH1Q8NDA8 1641 aa23.42■■□□□ 1.34
USE1-206ENST00000595101 HSPA2P54652 639 aa23.41■■□□□ 1.34
USE1-206ENST00000595101 FBXO31Q5XUX0 539 aaPredicted RBP23.41■■□□□ 1.34
USE1-206ENST00000595101 LMTK3Q96Q04 1460 aa23.41■■□□□ 1.34
USE1-206ENST00000595101 RNF17Q9BXT8 1623 aaKnown RBP23.41■■□□□ 1.34
USE1-206ENST00000595101 EIF2AK4Q9P2K8 1649 aaKnown RBP23.41■■□□□ 1.34
USE1-206ENST00000595101 ANKRD50Q9ULJ7 1429 aa23.4■■□□□ 1.34
USE1-206ENST00000595101 ROCK1Q13464 1354 aa23.4■■□□□ 1.34
USE1-206ENST00000595101 KDM5DQ9BY66 1539 aa23.39■■□□□ 1.34
USE1-206ENST00000595101 MROH2AA6NES4 1674 aa23.37■■□□□ 1.33
USE1-206ENST00000595101 ABCC3O15438 1527 aa23.36■■□□□ 1.33
USE1-206ENST00000595101 PRDM15P57071 1507 aaPredicted RBP23.33■■□□□ 1.32
USE1-206ENST00000595101 NPATQ14207 1427 aa23.32■■□□□ 1.32
USE1-206ENST00000595101 DEPDC5O75140 1603 aa23.3■■□□□ 1.32
USE1-206ENST00000595101 UHRF1BP1Q6BDS2 1440 aa23.3■■□□□ 1.32
USE1-206ENST00000595101 PZPP20742 1482 aa23.3■■□□□ 1.32
USE1-206ENST00000595101 FAM135AQ9P2D6 1515 aa23.3■■□□□ 1.32
USE1-206ENST00000595101 CEP152O94986 1710 aa23.28■■□□□ 1.32
USE1-206ENST00000595101 KANK1Q14678 1352 aa23.27■■□□□ 1.32
USE1-206ENST00000595101 NAIPQ13075 1403 aa23.27■■□□□ 1.32
USE1-206ENST00000595101 PREX1Q8TCU6 1659 aa23.27■■□□□ 1.31
USE1-206ENST00000595101 VWDEQ8N2E2 1590 aa23.26■■□□□ 1.31
USE1-206ENST00000595101 SETD1BQ9UPS6 1966 aaKnown RBP23.26■■□□□ 1.31
USE1-206ENST00000595101 TNRQ92752 1358 aa23.24■■□□□ 1.31
USE1-206ENST00000595101 ZC3H13Q5T200 1668 aaKnown RBP23.24■■□□□ 1.31
USE1-206ENST00000595101 CAMSAP1Q5T5Y3 1602 aa23.23■■□□□ 1.31
USE1-206ENST00000595101 HFM1A2PYH4 1435 aa23.2■■□□□ 1.3
USE1-206ENST00000595101 LMTK2Q8IWU2 1503 aa23.2■■□□□ 1.3
USE1-206ENST00000595101 NUP155O75694 1391 aa23.2■■□□□ 1.3
USE1-206ENST00000595101 ERVK-7P63135 1459 aa23.2■■□□□ 1.3
USE1-206ENST00000595101 ARHGAP31Q2M1Z3 1444 aa23.2■■□□□ 1.3
USE1-206ENST00000595101 MYO3AQ8NEV4 1616 aa23.18■■□□□ 1.3
USE1-206ENST00000595101 UNC13BO14795 1591 aa23.18■■□□□ 1.3
USE1-206ENST00000595101 SPATA31D1Q6ZQQ2 1576 aa23.17■■□□□ 1.3
USE1-206ENST00000595101 CFAP65Q6ZU64 1925 aaKnown RBP23.16■■□□□ 1.3
USE1-206ENST00000595101 CEP170BQ9Y4F5 1589 aaPredicted RBP23.15■■□□□ 1.3
USE1-206ENST00000595101 EFCAB6Q5THR3 1501 aa23.14■■□□□ 1.29
USE1-206ENST00000595101 A2ML1A8K2U0 1454 aa23.13■■□□□ 1.29
USE1-206ENST00000595101 GCC2Q8IWJ2 1684 aa23.11■■□□□ 1.29
USE1-206ENST00000595101 NCKAP5LQ9HCH0 1330 aa23.1■■□□□ 1.29
USE1-206ENST00000595101 TRIM52Q96A61 297 aa23.09■■□□□ 1.29
USE1-206ENST00000595101 ZNF142P52746 1687 aaPredicted RBP23.09■■□□□ 1.29
USE1-206ENST00000595101 IDI1Q13907 227 aa23.09■■□□□ 1.29
USE1-206ENST00000595101 NOS1P29475 1434 aa23.09■■□□□ 1.29
USE1-206ENST00000595101 NLRP1Q9C000 1473 aa23.09■■□□□ 1.29
USE1-206ENST00000595101 IQGAP3Q86VI3 1631 aa23.08■■□□□ 1.29
USE1-206ENST00000595101 STRCQ7RTU9 1775 aa23.07■■□□□ 1.28
USE1-206ENST00000595101 TET3O43151 1660 aa23.07■■□□□ 1.28
USE1-206ENST00000595101 SYNMO15061 1565 aa23.06■■□□□ 1.28
USE1-206ENST00000595101 UGGT1Q9NYU2 1555 aa23.05■■□□□ 1.28
USE1-206ENST00000595101 RPRD2Q5VT52 1461 aaKnown RBP23.04■■□□□ 1.28
USE1-206ENST00000595101 E9PCH4 1651 aa23.03■■□□□ 1.28
USE1-206ENST00000595101 THEMISQ8N1K5 641 aaPredicted RBP23.03■■□□□ 1.28
USE1-206ENST00000595101 SETD5Q9C0A6 1442 aa23.02■■□□□ 1.27
USE1-206ENST00000595101 PLA2R1Q13018 1463 aa23■■□□□ 1.27
USE1-206ENST00000595101 PKD2Q13563 968 aa22.99■■□□□ 1.27
USE1-206ENST00000595101 SLC4A1APQ9BWU0 796 aaKnown RBP22.99■■□□□ 1.27
USE1-206ENST00000595101 FOXD1Q16676 465 aa22.98■■□□□ 1.27
USE1-206ENST00000595101 SLC52A1Q9NWF4 448 aa22.98■■□□□ 1.27
USE1-206ENST00000595101 RAB3GAP2Q9H2M9 1393 aa22.97■■□□□ 1.27
USE1-206ENST00000595101 PIK3C2BO00750 1634 aa22.97■■□□□ 1.27
USE1-206ENST00000595101 STAG3Q9UJ98 1225 aa22.97■■□□□ 1.27
USE1-206ENST00000595101 DMRT2Q9Y5R5 561 aa22.96■■□□□ 1.27
USE1-206ENST00000595101 UBR1Q8IWV7 1749 aa22.95■■□□□ 1.26
USE1-206ENST00000595101 LTKP29376 864 aa22.95■■□□□ 1.26
USE1-206ENST00000595101 ANKLE2Q86XL3 938 aa22.95■■□□□ 1.26
USE1-206ENST00000595101 PTPRTO14522 1441 aa22.93■■□□□ 1.26
USE1-206ENST00000595101 CHGAP10645 457 aaKnown RBP22.92■■□□□ 1.26
USE1-206ENST00000595101 MPHOSPH9Q99550 1183 aa22.92■■□□□ 1.26
USE1-206ENST00000595101 NEURL4Q96JN8 1562 aa22.9■■□□□ 1.26
USE1-206ENST00000595101 TXNDC2Q86VQ3 553 aa22.9■■□□□ 1.26
USE1-206ENST00000595101 TMEM2Q9UHN6 1383 aa22.9■■□□□ 1.26
USE1-206ENST00000595101 ARHGAP23Q9P227 1491 aa22.89■■□□□ 1.25
USE1-206ENST00000595101 SENP3Q9H4L4 574 aaPredicted RBP22.88■■□□□ 1.25
USE1-206ENST00000595101 ADGRB3O60242 1522 aa22.87■■□□□ 1.25
USE1-206ENST00000595101 SLIT1O75093 1534 aa22.87■■□□□ 1.25
USE1-206ENST00000595101 ZNF335Q9H4Z2 1342 aaPredicted RBP22.86■■□□□ 1.25
USE1-206ENST00000595101 NUTM2DQ5VT03 806 aaPredicted RBP22.85■■□□□ 1.25
USE1-206ENST00000595101 NPHP4O75161 1426 aaPredicted RBP22.85■■□□□ 1.25
USE1-206ENST00000595101 MED14O60244 1454 aa22.84■■□□□ 1.25
USE1-206ENST00000595101 SCAF11Q99590 1463 aaKnown RBP22.84■■□□□ 1.25
USE1-206ENST00000595101 TMEM131LA2VDJ0 1609 aa22.84■■□□□ 1.25
USE1-206ENST00000595101 SPHKAPQ2M3C7 1700 aa22.84■■□□□ 1.25
USE1-206ENST00000595101 EID1Q9Y6B2 187 aa22.83■■□□□ 1.24
USE1-206ENST00000595101 POLR1AO95602 1720 aaPredicted RBP22.82■■□□□ 1.24
USE1-206ENST00000595101 TRPM2O94759 1503 aa22.81■■□□□ 1.24
USE1-206ENST00000595101 CLTCL1P53675 1640 aa22.8■■□□□ 1.24
USE1-206ENST00000595101 KDM5AP29375 1690 aaKnown RBP22.8■■□□□ 1.24
USE1-206ENST00000595101 MYO5BQ9ULV0 1848 aa22.8■■□□□ 1.24
USE1-206ENST00000595101 ZFYVE9O95405 1425 aa22.8■■□□□ 1.24
USE1-206ENST00000595101 RIMS2Q9UQ26 1411 aa22.79■■□□□ 1.24
USE1-206ENST00000595101 HRCP23327 699 aa22.78■■□□□ 1.24
USE1-206ENST00000595101 ZNF326Q5BKZ1 582 aaKnown RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms