RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 MBD5Q9P267 1494 aa15.82■□□□□ 0.12
NOTCH3-202ENST00000595045 CCNB3Q8WWL7 1395 aa15.8■□□□□ 0.12
NOTCH3-202ENST00000595045 TNRQ92752 1358 aa15.79■□□□□ 0.12
NOTCH3-202ENST00000595045 PHF23Q9BUL5 403 aaPredicted RBP15.79■□□□□ 0.12
NOTCH3-202ENST00000595045 ALKQ9UM73 1620 aa15.79■□□□□ 0.12
NOTCH3-202ENST00000595045 VWDEQ8N2E2 1590 aa15.79■□□□□ 0.12
NOTCH3-202ENST00000595045 FBXO31Q5XUX0 539 aaPredicted RBP15.78■□□□□ 0.12
NOTCH3-202ENST00000595045 MTUS2Q5JR59 1369 aa15.75■□□□□ 0.11
NOTCH3-202ENST00000595045 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.75■□□□□ 0.11
NOTCH3-202ENST00000595045 ANKLE2Q86XL3 938 aa15.75■□□□□ 0.11
NOTCH3-202ENST00000595045 PZPP20742 1482 aa15.75■□□□□ 0.11
NOTCH3-202ENST00000595045 DHX29Q7Z478 1369 aaKnown RBP15.75■□□□□ 0.11
NOTCH3-202ENST00000595045 RTEL1-TNFRSF6BF6WH68 1400 aa15.74■□□□□ 0.11
NOTCH3-202ENST00000595045 CEP162Q5TB80 1403 aa15.73■□□□□ 0.11
NOTCH3-202ENST00000595045 KDM5DQ9BY66 1539 aa15.73■□□□□ 0.11
NOTCH3-202ENST00000595045 DEPDC5O75140 1603 aa15.72■□□□□ 0.11
NOTCH3-202ENST00000595045 MED14O60244 1454 aa15.72■□□□□ 0.11
NOTCH3-202ENST00000595045 NPHP4O75161 1426 aaPredicted RBP15.72■□□□□ 0.11
NOTCH3-202ENST00000595045 KIF3BO15066 747 aa15.72■□□□□ 0.11
NOTCH3-202ENST00000595045 THEMISQ8N1K5 641 aaPredicted RBP15.72■□□□□ 0.11
NOTCH3-202ENST00000595045 TIAM1Q13009 1591 aa15.71■□□□□ 0.11
NOTCH3-202ENST00000595045 FAM135AQ9P2D6 1515 aa15.71■□□□□ 0.11
NOTCH3-202ENST00000595045 STRCP1A6NGW2 1772 aa15.71■□□□□ 0.11
NOTCH3-202ENST00000595045 MIA2Q96PC5 1412 aa15.7■□□□□ 0.1
NOTCH3-202ENST00000595045 SENP3Q9H4L4 574 aaPredicted RBP15.7■□□□□ 0.1
NOTCH3-202ENST00000595045 NLRP1Q9C000 1473 aa15.7■□□□□ 0.1
NOTCH3-202ENST00000595045 UGGT1Q9NYU2 1555 aa15.7■□□□□ 0.1
NOTCH3-202ENST00000595045 IQGAP1P46940 1657 aa15.69■□□□□ 0.1
NOTCH3-202ENST00000595045 WASHC2CQ9Y4E1 1318 aa15.68■□□□□ 0.1
NOTCH3-202ENST00000595045 LRRC7Q96NW7 1537 aa15.68■□□□□ 0.1
NOTCH3-202ENST00000595045 RNF17Q9BXT8 1623 aaKnown RBP15.67■□□□□ 0.1
NOTCH3-202ENST00000595045 EHBP1L1Q8N3D4 1523 aa15.65■□□□□ 0.1
NOTCH3-202ENST00000595045 RGS17Q9UGC6 210 aaPredicted RBP15.65■□□□□ 0.1
NOTCH3-202ENST00000595045 SYNMO15061 1565 aa15.65■□□□□ 0.1
NOTCH3-202ENST00000595045 NCOA2Q15596 1464 aa15.65■□□□□ 0.1
NOTCH3-202ENST00000595045 CCDC141Q6ZP82 1450 aa15.65■□□□□ 0.1
NOTCH3-202ENST00000595045 RSPH4AQ5TD94 716 aa15.62■□□□□ 0.09
NOTCH3-202ENST00000595045 ZC3H13Q5T200 1668 aaKnown RBP15.6■□□□□ 0.09
NOTCH3-202ENST00000595045 CAMSAP2Q08AD1 1489 aa15.6■□□□□ 0.09
NOTCH3-202ENST00000595045 KANK4Q5T7N3 995 aaPredicted RBP15.59■□□□□ 0.09
NOTCH3-202ENST00000595045 CFAP65Q6ZU64 1925 aaKnown RBP15.58■□□□□ 0.09
NOTCH3-202ENST00000595045 LOC105371045A0A1W2PR82 267 aa15.58■□□□□ 0.08
NOTCH3-202ENST00000595045 ERVK-7P63135 1459 aa15.58■□□□□ 0.08
NOTCH3-202ENST00000595045 ABCC3O15438 1527 aa15.58■□□□□ 0.08
NOTCH3-202ENST00000595045 XIRP1Q702N8 1843 aaKnown RBP15.57■□□□□ 0.08
NOTCH3-202ENST00000595045 UBR1Q8IWV7 1749 aa15.56■□□□□ 0.08
NOTCH3-202ENST00000595045 ARHGEF5Q12774 1597 aa15.55■□□□□ 0.08
NOTCH3-202ENST00000595045 SCAF11Q99590 1463 aaKnown RBP15.55■□□□□ 0.08
NOTCH3-202ENST00000595045 LRRC9Q6ZRR7 1453 aa15.54■□□□□ 0.08
NOTCH3-202ENST00000595045 POTEAQ6S8J7 498 aa15.54■□□□□ 0.08
NOTCH3-202ENST00000595045 TSPY4P0CV99 314 aa15.53■□□□□ 0.08
NOTCH3-202ENST00000595045 TSPY10P0CW01 314 aa15.53■□□□□ 0.08
NOTCH3-202ENST00000595045 LTKP29376 864 aa15.53■□□□□ 0.08
NOTCH3-202ENST00000595045 FAM135BQ49AJ0 1406 aa15.51■□□□□ 0.07
NOTCH3-202ENST00000595045 VPS8Q8N3P4 1428 aa15.51■□□□□ 0.07
NOTCH3-202ENST00000595045 CEP152O94986 1710 aa15.51■□□□□ 0.07
NOTCH3-202ENST00000595045 MROH1Q8NDA8 1641 aa15.51■□□□□ 0.07
NOTCH3-202ENST00000595045 SLIT1O75093 1534 aa15.51■□□□□ 0.07
NOTCH3-202ENST00000595045 ARHGAP23Q9P227 1491 aa15.51■□□□□ 0.07
NOTCH3-202ENST00000595045 TXNDC2Q86VQ3 553 aa15.5■□□□□ 0.07
NOTCH3-202ENST00000595045 EIF2AK4Q9P2K8 1649 aaKnown RBP15.5■□□□□ 0.07
NOTCH3-202ENST00000595045 MAST1Q9Y2H9 1570 aa15.49■□□□□ 0.07
NOTCH3-202ENST00000595045 ROBO1Q9Y6N7 1651 aa15.46■□□□□ 0.07
NOTCH3-202ENST00000595045 SETD1AO15047 1707 aaKnown RBP15.46■□□□□ 0.06
NOTCH3-202ENST00000595045 MYOM3Q5VTT5 1437 aa15.45■□□□□ 0.06
NOTCH3-202ENST00000595045 EID1Q9Y6B2 187 aa15.45■□□□□ 0.06
NOTCH3-202ENST00000595045 TMEM94Q12767 1356 aa15.45■□□□□ 0.06
NOTCH3-202ENST00000595045 MAP3K1Q13233 1512 aa15.44■□□□□ 0.06
NOTCH3-202ENST00000595045 ABCC5O15440 1437 aa15.43■□□□□ 0.06
NOTCH3-202ENST00000595045 PIK3C2BO00750 1634 aa15.43■□□□□ 0.06
NOTCH3-202ENST00000595045 ARHGAP31Q2M1Z3 1444 aa15.43■□□□□ 0.06
NOTCH3-202ENST00000595045 TMEM2Q9UHN6 1383 aa15.42■□□□□ 0.06
NOTCH3-202ENST00000595045 SRCAPQ6ZRS2 3230 aa15.42■□□□□ 0.06
NOTCH3-202ENST00000595045 DUOX2Q9NRD8 1548 aa15.41■□□□□ 0.06
NOTCH3-202ENST00000595045 PRDM15P57071 1507 aaPredicted RBP15.4■□□□□ 0.06
NOTCH3-202ENST00000595045 KCNA6P17658 529 aa15.4■□□□□ 0.06
NOTCH3-202ENST00000595045 PROSER2Q86WR7 435 aaPredicted RBP15.4■□□□□ 0.06
NOTCH3-202ENST00000595045 RBM33Q96EV2 1170 aaKnown RBP15.4■□□□□ 0.06
NOTCH3-202ENST00000595045 KIF15Q9NS87 1388 aa15.39■□□□□ 0.05
NOTCH3-202ENST00000595045 RRP7BPQ9NSQ0 103 aa15.39■□□□□ 0.05
NOTCH3-202ENST00000595045 TET3O43151 1660 aa15.38■□□□□ 0.05
NOTCH3-202ENST00000595045 PHLPP1O60346 1717 aa15.37■□□□□ 0.05
NOTCH3-202ENST00000595045 SLC26A8Q96RN1 970 aa15.37■□□□□ 0.05
NOTCH3-202ENST00000595045 STAG3Q9UJ98 1225 aa15.37■□□□□ 0.05
NOTCH3-202ENST00000595045 KDM5AP29375 1690 aaKnown RBP15.37■□□□□ 0.05
NOTCH3-202ENST00000595045 EFCAB6Q5THR3 1501 aa15.37■□□□□ 0.05
NOTCH3-202ENST00000595045 JCADQ9P266 1359 aa15.36■□□□□ 0.05
NOTCH3-202ENST00000595045 NKTRP30414 1462 aaKnown RBP15.35■□□□□ 0.05
NOTCH3-202ENST00000595045 NWD1Q149M9 1564 aa15.35■□□□□ 0.05
NOTCH3-202ENST00000595045 ERBINQ96RT1 1412 aa15.34■□□□□ 0.05
NOTCH3-202ENST00000595045 IDI1Q13907 227 aa15.34■□□□□ 0.05
NOTCH3-202ENST00000595045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.05
NOTCH3-202ENST00000595045 MSH6P52701 1360 aa15.34■□□□□ 0.05
NOTCH3-202ENST00000595045 SLAIN2Q9P270 581 aa15.33■□□□□ 0.04
NOTCH3-202ENST00000595045 DAPK1P53355 1430 aa15.33■□□□□ 0.04
NOTCH3-202ENST00000595045 UPF1Q92900 1129 aaKnown RBP eCLIP15.31■□□□□ 0.04
NOTCH3-202ENST00000595045 COL16A1Q07092 1604 aaPredicted RBP15.31■□□□□ 0.04
NOTCH3-202ENST00000595045 CROCC2H7BZ55 1655 aa15.3■□□□□ 0.04
NOTCH3-202ENST00000595045 LRP6O75581 1613 aa15.3■□□□□ 0.04
NOTCH3-202ENST00000595045 KANK1Q14678 1352 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms