RNA–Protein interactions for RNA: ENST00000594668.5

ZNF548-203, Transcript of zinc finger protein 548, humanhuman

TSL 5

Gene ZNF548, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-203ENST00000594668 FER1L4A9Z1Z3 1794 aa13.96□□□□□ -0.17
ZNF548-203ENST00000594668 MROH1Q8NDA8 1641 aa13.96□□□□□ -0.17
ZNF548-203ENST00000594668 CFAP65Q6ZU64 1925 aaKnown RBP13.94□□□□□ -0.18
ZNF548-203ENST00000594668 CEP152O94986 1710 aa13.94□□□□□ -0.18
ZNF548-203ENST00000594668 CLTCQ00610 1675 aaKnown RBP13.94□□□□□ -0.18
ZNF548-203ENST00000594668 MADDQ8WXG6 1647 aa13.93□□□□□ -0.18
ZNF548-203ENST00000594668 SETD5Q9C0A6 1442 aa13.93□□□□□ -0.18
ZNF548-203ENST00000594668 KDM4FA0A1W2PPD8 638 aa13.93□□□□□ -0.18
ZNF548-203ENST00000594668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.93□□□□□ -0.18
ZNF548-203ENST00000594668 UNC13BO14795 1591 aa13.92□□□□□ -0.18
ZNF548-203ENST00000594668 RIMS1Q86UR5 1692 aaKnown RBP13.92□□□□□ -0.18
ZNF548-203ENST00000594668 PRDM15P57071 1507 aaPredicted RBP13.91□□□□□ -0.18
ZNF548-203ENST00000594668 PCGF6Q9BYE7 350 aa13.9□□□□□ -0.18
ZNF548-203ENST00000594668 PPP6R1Q9UPN7 881 aa13.9□□□□□ -0.18
ZNF548-203ENST00000594668 VWDEQ8N2E2 1590 aa13.89□□□□□ -0.19
ZNF548-203ENST00000594668 RAB3GAP2Q9H2M9 1393 aa13.89□□□□□ -0.19
ZNF548-203ENST00000594668 C3P01024 1663 aa13.88□□□□□ -0.19
ZNF548-203ENST00000594668 ZC3H13Q5T200 1668 aaKnown RBP13.88□□□□□ -0.19
ZNF548-203ENST00000594668 MROH2AA6NES4 1674 aa13.88□□□□□ -0.19
ZNF548-203ENST00000594668 WASHC2CQ9Y4E1 1318 aa13.88□□□□□ -0.19
ZNF548-203ENST00000594668 IQGAP3Q86VI3 1631 aa13.87□□□□□ -0.19
ZNF548-203ENST00000594668 ABCC3O15438 1527 aa13.87□□□□□ -0.19
ZNF548-203ENST00000594668 KDM5DQ9BY66 1539 aa13.87□□□□□ -0.19
ZNF548-203ENST00000594668 CAMSAP1Q5T5Y3 1602 aa13.86□□□□□ -0.19
ZNF548-203ENST00000594668 NUP155O75694 1391 aa13.86□□□□□ -0.19
ZNF548-203ENST00000594668 TRIM52Q96A61 297 aa13.86□□□□□ -0.19
ZNF548-203ENST00000594668 ESF1Q9H501 851 aaKnown RBP13.86□□□□□ -0.19
ZNF548-203ENST00000594668 KANK1Q14678 1352 aa13.85□□□□□ -0.19
ZNF548-203ENST00000594668 FAM135AQ9P2D6 1515 aa13.85□□□□□ -0.19
ZNF548-203ENST00000594668 ZMYM3Q14202 1370 aa13.84□□□□□ -0.19
ZNF548-203ENST00000594668 CNTLNQ9NXG0 1405 aa13.84□□□□□ -0.19
ZNF548-203ENST00000594668 HRCP23327 699 aa13.84□□□□□ -0.19
ZNF548-203ENST00000594668 CEBPAP49715 358 aaPredicted RBP13.84□□□□□ -0.19
ZNF548-203ENST00000594668 TET3O43151 1660 aa13.84□□□□□ -0.19
ZNF548-203ENST00000594668 LMTK2Q8IWU2 1503 aa13.84□□□□□ -0.19
ZNF548-203ENST00000594668 E9PCH4 1651 aa13.83□□□□□ -0.2
ZNF548-203ENST00000594668 PTPRMP28827 1452 aa13.83□□□□□ -0.2
ZNF548-203ENST00000594668 PLPPR3Q6T4P5 718 aa13.83□□□□□ -0.2
ZNF548-203ENST00000594668 PZPP20742 1482 aa13.82□□□□□ -0.2
ZNF548-203ENST00000594668 SETD1BQ9UPS6 1966 aaKnown RBP13.81□□□□□ -0.2
ZNF548-203ENST00000594668 EFCAB6Q5THR3 1501 aa13.8□□□□□ -0.2
ZNF548-203ENST00000594668 PREX1Q8TCU6 1659 aa13.79□□□□□ -0.2
ZNF548-203ENST00000594668 FBXO31Q5XUX0 539 aaPredicted RBP13.79□□□□□ -0.2
ZNF548-203ENST00000594668 MPHOSPH9Q99550 1183 aa13.79□□□□□ -0.2
ZNF548-203ENST00000594668 SLC4A1APQ9BWU0 796 aaKnown RBP13.78□□□□□ -0.2
ZNF548-203ENST00000594668 ACIN1Q9UKV3 1341 aaKnown RBP13.78□□□□□ -0.2
ZNF548-203ENST00000594668 NPATQ14207 1427 aa13.78□□□□□ -0.2
ZNF548-203ENST00000594668 ARHGAP31Q2M1Z3 1444 aa13.78□□□□□ -0.2
ZNF548-203ENST00000594668 PKD2Q13563 968 aa13.76□□□□□ -0.21
ZNF548-203ENST00000594668 SPHKAPQ2M3C7 1700 aa13.76□□□□□ -0.21
ZNF548-203ENST00000594668 FOXD1Q16676 465 aa13.75□□□□□ -0.21
ZNF548-203ENST00000594668 SPATA31D1Q6ZQQ2 1576 aa13.75□□□□□ -0.21
ZNF548-203ENST00000594668 RPRD2Q5VT52 1461 aaKnown RBP13.74□□□□□ -0.21
ZNF548-203ENST00000594668 ERVK-7P63135 1459 aa13.74□□□□□ -0.21
ZNF548-203ENST00000594668 SYNMO15061 1565 aa13.73□□□□□ -0.21
ZNF548-203ENST00000594668 NOS1P29475 1434 aa13.72□□□□□ -0.21
ZNF548-203ENST00000594668 MYO5BQ9ULV0 1848 aa13.71□□□□□ -0.22
ZNF548-203ENST00000594668 PLA2R1Q13018 1463 aa13.7□□□□□ -0.22
ZNF548-203ENST00000594668 MYO3AQ8NEV4 1616 aa13.7□□□□□ -0.22
ZNF548-203ENST00000594668 PTPRTO14522 1441 aa13.7□□□□□ -0.22
ZNF548-203ENST00000594668 TNRQ92752 1358 aa13.7□□□□□ -0.22
ZNF548-203ENST00000594668 UGGT1Q9NYU2 1555 aa13.69□□□□□ -0.22
ZNF548-203ENST00000594668 DHX57Q6P158 1386 aaKnown RBP13.69□□□□□ -0.22
ZNF548-203ENST00000594668 PIK3C2BO00750 1634 aa13.68□□□□□ -0.22
ZNF548-203ENST00000594668 KIF1BO60333 1816 aa13.67□□□□□ -0.22
ZNF548-203ENST00000594668 IDI1Q13907 227 aa13.67□□□□□ -0.22
ZNF548-203ENST00000594668 TRPM2O94759 1503 aa13.67□□□□□ -0.22
ZNF548-203ENST00000594668 CLTCL1P53675 1640 aa13.67□□□□□ -0.22
ZNF548-203ENST00000594668 ZNF142P52746 1687 aaPredicted RBP13.66□□□□□ -0.22
ZNF548-203ENST00000594668 AEBP2Q6ZN18 517 aaPredicted RBP13.66□□□□□ -0.22
ZNF548-203ENST00000594668 UBR1Q8IWV7 1749 aa13.66□□□□□ -0.22
ZNF548-203ENST00000594668 ANKRD30BQ9BXX2 1392 aa13.65□□□□□ -0.22
ZNF548-203ENST00000594668 CEP170BQ9Y4F5 1589 aaPredicted RBP13.65□□□□□ -0.22
ZNF548-203ENST00000594668 NLRP1Q9C000 1473 aa13.64□□□□□ -0.23
ZNF548-203ENST00000594668 SLC52A1Q9NWF4 448 aa13.64□□□□□ -0.23
ZNF548-203ENST00000594668 UHRF1BP1Q6BDS2 1440 aa13.64□□□□□ -0.23
ZNF548-203ENST00000594668 A2ML1A8K2U0 1454 aa13.63□□□□□ -0.23
ZNF548-203ENST00000594668 TMEM131LA2VDJ0 1609 aa13.63□□□□□ -0.23
ZNF548-203ENST00000594668 KDM5AP29375 1690 aaKnown RBP13.63□□□□□ -0.23
ZNF548-203ENST00000594668 LMTK3Q96Q04 1460 aa13.62□□□□□ -0.23
ZNF548-203ENST00000594668 ADGRB3O60242 1522 aa13.59□□□□□ -0.23
ZNF548-203ENST00000594668 CCDC144AA2RUR9 1427 aa13.59□□□□□ -0.23
ZNF548-203ENST00000594668 CHGAP10645 457 aaKnown RBP13.59□□□□□ -0.23
ZNF548-203ENST00000594668 HSPA2P54652 639 aa13.59□□□□□ -0.23
ZNF548-203ENST00000594668 SIN3AQ96ST3 1273 aa13.59□□□□□ -0.23
ZNF548-203ENST00000594668 STAG3Q9UJ98 1225 aa13.58□□□□□ -0.24
ZNF548-203ENST00000594668 THEMISQ8N1K5 641 aaPredicted RBP13.57□□□□□ -0.24
ZNF548-203ENST00000594668 STRCQ7RTU9 1775 aa13.57□□□□□ -0.24
ZNF548-203ENST00000594668 PPLO60437 1756 aa13.55□□□□□ -0.24
ZNF548-203ENST00000594668 SPATA31E1Q6ZUB1 1445 aa13.55□□□□□ -0.24
ZNF548-203ENST00000594668 POLR1AO95602 1720 aaPredicted RBP13.54□□□□□ -0.24
ZNF548-203ENST00000594668 IFT172Q9UG01 1749 aa13.54□□□□□ -0.24
ZNF548-203ENST00000594668 NEUROD1Q13562 356 aa13.54□□□□□ -0.24
ZNF548-203ENST00000594668 RGL3Q3MIN7 710 aa13.54□□□□□ -0.24
ZNF548-203ENST00000594668 CCER1Q8TC90 406 aaPredicted RBP13.54□□□□□ -0.24
ZNF548-203ENST00000594668 SLIT1O75093 1534 aa13.54□□□□□ -0.24
ZNF548-203ENST00000594668 ZNF326Q5BKZ1 582 aaKnown RBP13.53□□□□□ -0.24
ZNF548-203ENST00000594668 TMEM2Q9UHN6 1383 aa13.53□□□□□ -0.24
ZNF548-203ENST00000594668 ARHGAP23Q9P227 1491 aa13.53□□□□□ -0.24
ZNF548-203ENST00000594668 NEURL4Q96JN8 1562 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms