RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 RIMS1Q86UR5 1692 aaKnown RBP31.34■■■□□ 2.61
DNMT1-227ENST00000592342 PLPPR3Q6T4P5 718 aa31.32■■■□□ 2.6
DNMT1-227ENST00000592342 PTPRMP28827 1452 aa31.31■■■□□ 2.6
DNMT1-227ENST00000592342 CNTLNQ9NXG0 1405 aa31.3■■■□□ 2.6
DNMT1-227ENST00000592342 WASHC2CQ9Y4E1 1318 aa31.27■■■□□ 2.6
DNMT1-227ENST00000592342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.27■■■□□ 2.63e-7■■■□□ 16.2
DNMT1-227ENST00000592342 RNF17Q9BXT8 1623 aaKnown RBP31.27■■■□□ 2.6
DNMT1-227ENST00000592342 KANK1Q14678 1352 aa31.23■■■□□ 2.59
DNMT1-227ENST00000592342 KDM5DQ9BY66 1539 aa31.22■■■□□ 2.59
DNMT1-227ENST00000592342 FAM135AQ9P2D6 1515 aa31.21■■■□□ 2.59
DNMT1-227ENST00000592342 CLTCQ00610 1675 aaKnown RBP31.21■■■□□ 2.59
DNMT1-227ENST00000592342 CEBPAP49715 358 aaPredicted RBP31.2■■■□□ 2.59
DNMT1-227ENST00000592342 HFM1A2PYH4 1435 aa31.19■■■□□ 2.58
DNMT1-227ENST00000592342 NAIPQ13075 1403 aa31.19■■■□□ 2.58
DNMT1-227ENST00000592342 ZMYM3Q14202 1370 aa31.18■■■□□ 2.58
DNMT1-227ENST00000592342 MROH1Q8NDA8 1641 aa31.18■■■□□ 2.58
DNMT1-227ENST00000592342 PRDM15P57071 1507 aaPredicted RBP31.18■■■□□ 2.58
DNMT1-227ENST00000592342 DEPDC5O75140 1603 aa31.16■■■□□ 2.58
DNMT1-227ENST00000592342 MROH2AA6NES4 1674 aa31.16■■■□□ 2.58
DNMT1-227ENST00000592342 GCC2Q8IWJ2 1684 aa31.15■■■□□ 2.58
DNMT1-227ENST00000592342 ABCC3O15438 1527 aa31.13■■■□□ 2.57
DNMT1-227ENST00000592342 ZC3H13Q5T200 1668 aaKnown RBP31.13■■■□□ 2.57
DNMT1-227ENST00000592342 C3P01024 1663 aa31.11■■■□□ 2.57
DNMT1-227ENST00000592342 UNC13BO14795 1591 aa31.08■■■□□ 2.57
DNMT1-227ENST00000592342 CEP152O94986 1710 aa31.07■■■□□ 2.56
DNMT1-227ENST00000592342 NUP155O75694 1391 aa31.06■■■□□ 2.56
DNMT1-227ENST00000592342 VWDEQ8N2E2 1590 aa31.04■■■□□ 2.56
DNMT1-227ENST00000592342 TRIM52Q96A61 297 aa31.03■■■□□ 2.56
DNMT1-227ENST00000592342 CAMSAP1Q5T5Y3 1602 aa31.02■■■□□ 2.56
DNMT1-227ENST00000592342 PZPP20742 1482 aa31.02■■■□□ 2.56
DNMT1-227ENST00000592342 SETD5Q9C0A6 1442 aa31.02■■■□□ 2.56
DNMT1-227ENST00000592342 NPATQ14207 1427 aa31.01■■■□□ 2.55
DNMT1-227ENST00000592342 LMTK2Q8IWU2 1503 aa31.01■■■□□ 2.55
DNMT1-227ENST00000592342 TRIM26Q12899 539 aaPredicted RBP30.99■■■□□ 2.55
DNMT1-227ENST00000592342 FBXO31Q5XUX0 539 aaPredicted RBP30.99■■■□□ 2.55
DNMT1-227ENST00000592342 ARHGAP31Q2M1Z3 1444 aa30.97■■■□□ 2.55
DNMT1-227ENST00000592342 IQGAP3Q86VI3 1631 aa30.95■■■□□ 2.54
DNMT1-227ENST00000592342 ACIN1Q9UKV3 1341 aaKnown RBP30.93■■■□□ 2.54
DNMT1-227ENST00000592342 UHRF1BP1Q6BDS2 1440 aa30.92■■■□□ 2.54
DNMT1-227ENST00000592342 EFCAB6Q5THR3 1501 aa30.92■■■□□ 2.54
DNMT1-227ENST00000592342 TNRQ92752 1358 aa30.92■■■□□ 2.54
DNMT1-227ENST00000592342 RAB3GAP2Q9H2M9 1393 aa30.92■■■□□ 2.54
DNMT1-227ENST00000592342 TET3O43151 1660 aa30.91■■■□□ 2.54
DNMT1-227ENST00000592342 SETD1BQ9UPS6 1966 aaKnown RBP30.89■■■□□ 2.54
DNMT1-227ENST00000592342 ERVK-7P63135 1459 aa30.89■■■□□ 2.53
DNMT1-227ENST00000592342 PREX1Q8TCU6 1659 aa30.88■■■□□ 2.53
DNMT1-227ENST00000592342 RPRD2Q5VT52 1461 aaKnown RBP30.86■■■□□ 2.53
DNMT1-227ENST00000592342 SPATA31D1Q6ZQQ2 1576 aa30.86■■■□□ 2.53
DNMT1-227ENST00000592342 SLC4A1APQ9BWU0 796 aaKnown RBP30.85■■■□□ 2.53
DNMT1-227ENST00000592342 LMTK3Q96Q04 1460 aa30.83■■■□□ 2.53
DNMT1-227ENST00000592342 CFAP65Q6ZU64 1925 aaKnown RBP30.83■■■□□ 2.53
DNMT1-227ENST00000592342 MYO3AQ8NEV4 1616 aa30.81■■■□□ 2.52
DNMT1-227ENST00000592342 E9PCH4 1651 aa30.79■■■□□ 2.52
DNMT1-227ENST00000592342 NLRP1Q9C000 1473 aa30.78■■■□□ 2.52
DNMT1-227ENST00000592342 HRCP23327 699 aa30.78■■■□□ 2.52
DNMT1-227ENST00000592342 PKD2Q13563 968 aa30.78■■■□□ 2.52
DNMT1-227ENST00000592342 NOS1P29475 1434 aa30.77■■■□□ 2.52
DNMT1-227ENST00000592342 HSPA2P54652 639 aa30.77■■■□□ 2.52
DNMT1-227ENST00000592342 MPHOSPH9Q99550 1183 aa30.75■■■□□ 2.51
DNMT1-227ENST00000592342 A2ML1A8K2U0 1454 aa30.75■■■□□ 2.51
DNMT1-227ENST00000592342 CEP170BQ9Y4F5 1589 aaPredicted RBP30.75■■■□□ 2.51
DNMT1-227ENST00000592342 SLC52A1Q9NWF4 448 aa30.71■■■□□ 2.51
DNMT1-227ENST00000592342 ZNF142P52746 1687 aaPredicted RBP30.71■■■□□ 2.51
DNMT1-227ENST00000592342 STAG3Q9UJ98 1225 aa30.7■■■□□ 2.51
DNMT1-227ENST00000592342 SYNMO15061 1565 aa30.7■■■□□ 2.5
DNMT1-227ENST00000592342 UGGT1Q9NYU2 1555 aa30.67■■■□□ 2.5
DNMT1-227ENST00000592342 IDI1Q13907 227 aa30.67■■■□□ 2.5
DNMT1-227ENST00000592342 THEMISQ8N1K5 641 aaPredicted RBP30.66■■■□□ 2.5
DNMT1-227ENST00000592342 FOXD1Q16676 465 aa30.65■■■□□ 2.5
DNMT1-227ENST00000592342 PTPRTO14522 1441 aa30.63■■■□□ 2.49
DNMT1-227ENST00000592342 SPHKAPQ2M3C7 1700 aa30.62■■■□□ 2.49
DNMT1-227ENST00000592342 CHGAP10645 457 aaKnown RBP30.61■■■□□ 2.49
DNMT1-227ENST00000592342 PIK3C2BO00750 1634 aa30.61■■■□□ 2.49
DNMT1-227ENST00000592342 PCGF6Q9BYE7 350 aa30.6■■■□□ 2.49
DNMT1-227ENST00000592342 TRPM2O94759 1503 aa30.57■■■□□ 2.48
DNMT1-227ENST00000592342 UBR1Q8IWV7 1749 aa30.55■■■□□ 2.48
DNMT1-227ENST00000592342 PLA2R1Q13018 1463 aa30.55■■■□□ 2.48
DNMT1-227ENST00000592342 ADGRB3O60242 1522 aa30.53■■■□□ 2.48
DNMT1-227ENST00000592342 ANKLE2Q86XL3 938 aa30.51■■■□□ 2.47
DNMT1-227ENST00000592342 NCKAP5LQ9HCH0 1330 aa30.49■■■□□ 2.47
DNMT1-227ENST00000592342 KDM5AP29375 1690 aaKnown RBP30.49■■■□□ 2.47
DNMT1-227ENST00000592342 CCDC144AA2RUR9 1427 aa30.49■■■□□ 2.47
DNMT1-227ENST00000592342 CLTCL1P53675 1640 aa30.47■■■□□ 2.47
DNMT1-227ENST00000592342 DMRT2Q9Y5R5 561 aa30.47■■■□□ 2.47
DNMT1-227ENST00000592342 EID1Q9Y6B2 187 aa30.47■■■□□ 2.47
DNMT1-227ENST00000592342 TMEM2Q9UHN6 1383 aa30.46■■■□□ 2.47
DNMT1-227ENST00000592342 TMEM131LA2VDJ0 1609 aa30.45■■■□□ 2.47
DNMT1-227ENST00000592342 ZNF326Q5BKZ1 582 aaKnown RBP30.44■■■□□ 2.46
DNMT1-227ENST00000592342 TXNDC2Q86VQ3 553 aa30.44■■■□□ 2.46
DNMT1-227ENST00000592342 SLIT1O75093 1534 aa30.43■■■□□ 2.46
DNMT1-227ENST00000592342 HDGFP51858 240 aaKnown RBP30.43■■■□□ 2.46
DNMT1-227ENST00000592342 STRCQ7RTU9 1775 aa30.43■■■□□ 2.46
DNMT1-227ENST00000592342 ARHGAP23Q9P227 1491 aa30.42■■■□□ 2.46
DNMT1-227ENST00000592342 ANKRD30BQ9BXX2 1392 aa30.39■■■□□ 2.45
DNMT1-227ENST00000592342 SCAF11Q99590 1463 aaKnown RBP30.38■■■□□ 2.45
DNMT1-227ENST00000592342 KIF1BO60333 1816 aa30.38■■■□□ 2.45
DNMT1-227ENST00000592342 PPP1R15AO75807 674 aaPredicted RBP30.38■■■□□ 2.45
DNMT1-227ENST00000592342 RIMS2Q9UQ26 1411 aa30.38■■■□□ 2.45
DNMT1-227ENST00000592342 POLR1AO95602 1720 aaPredicted RBP30.37■■■□□ 2.45
DNMT1-227ENST00000592342 LTKP29376 864 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms