RNA–Protein interactions for RNA: ENST00000592083.5

ERCC1-214, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-214ENST00000592083 A2ML1A8K2U0 1454 aa23.78■■□□□ 1.4
ERCC1-214ENST00000592083 ADGBQ8N7X0 1667 aa23.77■■□□□ 1.4
ERCC1-214ENST00000592083 NCOA2Q15596 1464 aa23.77■■□□□ 1.4
ERCC1-214ENST00000592083 TOM1O60784 492 aa23.75■■□□□ 1.39
ERCC1-214ENST00000592083 KIF3BO15066 747 aa23.73■■□□□ 1.39
ERCC1-214ENST00000592083 MBD5Q9P267 1494 aa23.73■■□□□ 1.39
ERCC1-214ENST00000592083 DHX29Q7Z478 1369 aaKnown RBP23.72■■□□□ 1.39
ERCC1-214ENST00000592083 SHANK2Q9UPX8 1470 aa23.71■■□□□ 1.39
ERCC1-214ENST00000592083 TNRQ92752 1358 aa23.71■■□□□ 1.39
ERCC1-214ENST00000592083 KANK4Q5T7N3 995 aaPredicted RBP23.71■■□□□ 1.39
ERCC1-214ENST00000592083 MED1Q15648 1581 aaPredicted RBP23.7■■□□□ 1.38
ERCC1-214ENST00000592083 LRRC9Q6ZRR7 1453 aa23.7■■□□□ 1.38
ERCC1-214ENST00000592083 NEURL4Q96JN8 1562 aa23.69■■□□□ 1.38
ERCC1-214ENST00000592083 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.69■■□□□ 1.387e-7■■■■■ 52.8
ERCC1-214ENST00000592083 POLR1AO95602 1720 aaPredicted RBP23.69■■□□□ 1.38
ERCC1-214ENST00000592083 ANKLE2Q86XL3 938 aa23.68■■□□□ 1.38
ERCC1-214ENST00000592083 SENP3Q9H4L4 574 aaPredicted RBP23.67■■□□□ 1.38
ERCC1-214ENST00000592083 RTEL1-TNFRSF6BF6WH68 1400 aa23.67■■□□□ 1.38
ERCC1-214ENST00000592083 WASHC2CQ9Y4E1 1318 aa23.66■■□□□ 1.38
ERCC1-214ENST00000592083 CPS1P31327 1500 aa23.66■■□□□ 1.38
ERCC1-214ENST00000592083 CAMSAP2Q08AD1 1489 aa23.65■■□□□ 1.38
ERCC1-214ENST00000592083 THEMISQ8N1K5 641 aaPredicted RBP23.65■■□□□ 1.38
ERCC1-214ENST00000592083 MAP3K1Q13233 1512 aa23.63■■□□□ 1.37
ERCC1-214ENST00000592083 VWDEQ8N2E2 1590 aa23.61■■□□□ 1.37
ERCC1-214ENST00000592083 PZPP20742 1482 aa23.61■■□□□ 1.37
ERCC1-214ENST00000592083 MIA2Q96PC5 1412 aa23.6■■□□□ 1.37
ERCC1-214ENST00000592083 PHF23Q9BUL5 403 aaPredicted RBP23.59■■□□□ 1.37
ERCC1-214ENST00000592083 ALKQ9UM73 1620 aa23.59■■□□□ 1.37
ERCC1-214ENST00000592083 NPHP4O75161 1426 aaPredicted RBP23.58■■□□□ 1.36
ERCC1-214ENST00000592083 CCDC141Q6ZP82 1450 aa23.57■■□□□ 1.36
ERCC1-214ENST00000592083 APLP2Q06481 763 aa23.57■■□□□ 1.36
ERCC1-214ENST00000592083 KDM5DQ9BY66 1539 aa23.57■■□□□ 1.36
ERCC1-214ENST00000592083 UGGT1Q9NYU2 1555 aa23.56■■□□□ 1.36
ERCC1-214ENST00000592083 STRCP1A6NGW2 1772 aa23.55■■□□□ 1.36
ERCC1-214ENST00000592083 RSPH4AQ5TD94 716 aa23.54■■□□□ 1.36
ERCC1-214ENST00000592083 MED14O60244 1454 aa23.53■■□□□ 1.36
ERCC1-214ENST00000592083 CFAP65Q6ZU64 1925 aaKnown RBP23.53■■□□□ 1.36
ERCC1-214ENST00000592083 NLRP1Q9C000 1473 aa23.52■■□□□ 1.36
ERCC1-214ENST00000592083 FAM135AQ9P2D6 1515 aa23.52■■□□□ 1.36
ERCC1-214ENST00000592083 MYOM3Q5VTT5 1437 aa23.51■■□□□ 1.35
ERCC1-214ENST00000592083 ARHGEF5Q12774 1597 aa23.51■■□□□ 1.35
ERCC1-214ENST00000592083 DEPDC5O75140 1603 aa23.51■■□□□ 1.35
ERCC1-214ENST00000592083 TSPY4P0CV99 314 aa23.5■■□□□ 1.35
ERCC1-214ENST00000592083 TSPY10P0CW01 314 aa23.5■■□□□ 1.35
ERCC1-214ENST00000592083 IQGAP1P46940 1657 aa23.49■■□□□ 1.35
ERCC1-214ENST00000592083 LRRC7Q96NW7 1537 aa23.49■■□□□ 1.35
ERCC1-214ENST00000592083 RGS17Q9UGC6 210 aaPredicted RBP23.43■■□□□ 1.34
ERCC1-214ENST00000592083 ABCC3O15438 1527 aa23.4■■□□□ 1.34
ERCC1-214ENST00000592083 LTKP29376 864 aa23.4■■□□□ 1.34
ERCC1-214ENST00000592083 MAST1Q9Y2H9 1570 aa23.39■■□□□ 1.33
ERCC1-214ENST00000592083 PTPN23Q9H3S7 1636 aa23.37■■□□□ 1.33
ERCC1-214ENST00000592083 ERVK-7P63135 1459 aa23.37■■□□□ 1.33
ERCC1-214ENST00000592083 TXNDC2Q86VQ3 553 aa23.37■■□□□ 1.33
ERCC1-214ENST00000592083 ZC3H13Q5T200 1668 aaKnown RBP23.37■■□□□ 1.33
ERCC1-214ENST00000592083 RNF17Q9BXT8 1623 aaKnown RBP23.37■■□□□ 1.33
ERCC1-214ENST00000592083 UBR1Q8IWV7 1749 aa23.35■■□□□ 1.33
ERCC1-214ENST00000592083 FGD6Q6ZV73 1430 aa23.34■■□□□ 1.33
ERCC1-214ENST00000592083 CEP152O94986 1710 aa23.34■■□□□ 1.33
ERCC1-214ENST00000592083 XIRP1Q702N8 1843 aaKnown RBP23.34■■□□□ 1.33
ERCC1-214ENST00000592083 ABCC5O15440 1437 aa23.33■■□□□ 1.33
ERCC1-214ENST00000592083 SYNMO15061 1565 aa23.33■■□□□ 1.33
ERCC1-214ENST00000592083 MROH1Q8NDA8 1641 aa23.31■■□□□ 1.32
ERCC1-214ENST00000592083 SCAF11Q99590 1463 aaKnown RBP23.3■■□□□ 1.32
ERCC1-214ENST00000592083 RRP7BPQ9NSQ0 103 aa23.29■■□□□ 1.32
ERCC1-214ENST00000592083 CROCC2H7BZ55 1655 aa23.28■■□□□ 1.32
ERCC1-214ENST00000592083 DAPK1P53355 1430 aa23.28■■□□□ 1.32
ERCC1-214ENST00000592083 POTEAQ6S8J7 498 aa23.28■■□□□ 1.32
ERCC1-214ENST00000592083 CHIC2Q9UKJ5 165 aa23.27■■□□□ 1.32
ERCC1-214ENST00000592083 EIF2AK4Q9P2K8 1649 aaKnown RBP23.26■■□□□ 1.31
ERCC1-214ENST00000592083 ARHGAP23Q9P227 1491 aa23.26■■□□□ 1.31
ERCC1-214ENST00000592083 RBM33Q96EV2 1170 aaKnown RBP23.26■■□□□ 1.31
ERCC1-214ENST00000592083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.26■■□□□ 1.31
ERCC1-214ENST00000592083 EID1Q9Y6B2 187 aa23.26■■□□□ 1.31
ERCC1-214ENST00000592083 KIF15Q9NS87 1388 aa23.26■■□□□ 1.31
ERCC1-214ENST00000592083 DUOX2Q9NRD8 1548 aa23.25■■□□□ 1.31
ERCC1-214ENST00000592083 SLIT1O75093 1534 aa23.24■■□□□ 1.31
ERCC1-214ENST00000592083 FAM50AQ14320 339 aaKnown RBP23.24■■□□□ 1.31
ERCC1-214ENST00000592083 PPARGC1BQ86YN6 1023 aaKnown RBP23.21■■□□□ 1.31
ERCC1-214ENST00000592083 STAG3Q9UJ98 1225 aa23.21■■□□□ 1.31
ERCC1-214ENST00000592083 FAM135BQ49AJ0 1406 aa23.21■■□□□ 1.31
ERCC1-214ENST00000592083 SLC26A8Q96RN1 970 aa23.2■■□□□ 1.3
ERCC1-214ENST00000592083 PIK3C2BO00750 1634 aa23.19■■□□□ 1.3
ERCC1-214ENST00000592083 TMEM94Q12767 1356 aa23.19■■□□□ 1.3
ERCC1-214ENST00000592083 PROSER2Q86WR7 435 aaPredicted RBP23.19■■□□□ 1.3
ERCC1-214ENST00000592083 TMEM2Q9UHN6 1383 aa23.18■■□□□ 1.3
ERCC1-214ENST00000592083 KCNA6P17658 529 aa23.18■■□□□ 1.3
ERCC1-214ENST00000592083 IDI1Q13907 227 aa23.18■■□□□ 1.3
ERCC1-214ENST00000592083 ARHGAP31Q2M1Z3 1444 aa23.17■■□□□ 1.3
ERCC1-214ENST00000592083 ANKRD30AQ9BXX3 1397 aa23.16■■□□□ 1.3
ERCC1-214ENST00000592083 ERBINQ96RT1 1412 aa23.16■■□□□ 1.3
ERCC1-214ENST00000592083 ROBO1Q9Y6N7 1651 aa23.13■■□□□ 1.29
ERCC1-214ENST00000592083 PRDM15P57071 1507 aaPredicted RBP23.11■■□□□ 1.29
ERCC1-214ENST00000592083 TET3O43151 1660 aa23.09■■□□□ 1.29
ERCC1-214ENST00000592083 BCANQ96GW7 911 aa23.09■■□□□ 1.29
ERCC1-214ENST00000592083 ADGRL2O95490 1459 aa23.08■■□□□ 1.29
ERCC1-214ENST00000592083 EFCAB6Q5THR3 1501 aa23.08■■□□□ 1.28
ERCC1-214ENST00000592083 KANK1Q14678 1352 aa23.06■■□□□ 1.28
ERCC1-214ENST00000592083 SLAIN2Q9P270 581 aa23.06■■□□□ 1.28
ERCC1-214ENST00000592083 SETD1AO15047 1707 aaKnown RBP23.04■■□□□ 1.28
ERCC1-214ENST00000592083 ITGAEP38570 1179 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 200.8 ms