RNA–Protein interactions for RNA: ENST00000591745.1

LSM7-207, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 543 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-207ENST00000591745 KCNA4P22459 653 aa21■□□□□ 0.95
LSM7-207ENST00000591745 KANK4Q5T7N3 995 aaPredicted RBP21■□□□□ 0.95
LSM7-207ENST00000591745 SCAF1Q9H7N4 1312 aaKnown RBP21■□□□□ 0.95
LSM7-207ENST00000591745 VWDEQ8N2E2 1590 aa20.99■□□□□ 0.95
LSM7-207ENST00000591745 A2ML1A8K2U0 1454 aa20.99■□□□□ 0.95
LSM7-207ENST00000591745 A2MP01023 1474 aa20.99■□□□□ 0.95
LSM7-207ENST00000591745 EHBP1L1Q8N3D4 1523 aa20.99■□□□□ 0.95
LSM7-207ENST00000591745 MTUS2Q5JR59 1369 aa20.98■□□□□ 0.95
LSM7-207ENST00000591745 STRCP1A6NGW2 1772 aa20.98■□□□□ 0.95
LSM7-207ENST00000591745 RRBP1Q9P2E9 1410 aaKnown RBP20.98■□□□□ 0.95
LSM7-207ENST00000591745 GPATCH8Q9UKJ3 1502 aaKnown RBP20.98■□□□□ 0.95
LSM7-207ENST00000591745 HNRNPMP52272 730 aaKnown RBP eCLIP20.97■□□□□ 0.95
LSM7-207ENST00000591745 CPS1P31327 1500 aa20.97■□□□□ 0.95
LSM7-207ENST00000591745 SHANK2Q9UPX8 1470 aa20.96■□□□□ 0.95
LSM7-207ENST00000591745 ZNF777Q9ULD5 760 aaPredicted RBP20.96■□□□□ 0.95
LSM7-207ENST00000591745 SPAG9O60271 1321 aaKnown RBP20.96■□□□□ 0.95
LSM7-207ENST00000591745 ADGBQ8N7X0 1667 aa20.96■□□□□ 0.95
LSM7-207ENST00000591745 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.95■□□□□ 0.94
LSM7-207ENST00000591745 GGT6Q6P531 493 aa20.92■□□□□ 0.94
LSM7-207ENST00000591745 CCNB3Q8WWL7 1395 aa20.91■□□□□ 0.94
LSM7-207ENST00000591745 ZEB1P37275 1124 aaPredicted RBP20.88■□□□□ 0.93
LSM7-207ENST00000591745 FBXO31Q5XUX0 539 aaPredicted RBP20.87■□□□□ 0.93
LSM7-207ENST00000591745 KIAA1107Q9UPP5 1409 aa20.87■□□□□ 0.93
LSM7-207ENST00000591745 TOM1O60784 492 aa20.86■□□□□ 0.93
LSM7-207ENST00000591745 DEPDC5O75140 1603 aa20.83■□□□□ 0.93
LSM7-207ENST00000591745 RGS17Q9UGC6 210 aaPredicted RBP20.83■□□□□ 0.93
LSM7-207ENST00000591745 TNRQ92752 1358 aa20.83■□□□□ 0.92
LSM7-207ENST00000591745 IQGAP1P46940 1657 aa20.83■□□□□ 0.92
LSM7-207ENST00000591745 PPP4R3CPQ6ZMV5 832 aa20.82■□□□□ 0.92
LSM7-207ENST00000591745 XIRP1Q702N8 1843 aaKnown RBP20.81■□□□□ 0.92
LSM7-207ENST00000591745 RNF17Q9BXT8 1623 aaKnown RBP20.81■□□□□ 0.92
LSM7-207ENST00000591745 PZPP20742 1482 aa20.81■□□□□ 0.92
LSM7-207ENST00000591745 NCOA2Q15596 1464 aa20.81■□□□□ 0.92
LSM7-207ENST00000591745 ZNF644Q9H582 1327 aaPredicted RBP20.8■□□□□ 0.92
LSM7-207ENST00000591745 MIA2Q96PC5 1412 aa20.8■□□□□ 0.92
LSM7-207ENST00000591745 LRRC7Q96NW7 1537 aa20.8■□□□□ 0.92
LSM7-207ENST00000591745 MED14O60244 1454 aa20.8■□□□□ 0.92
LSM7-207ENST00000591745 PLEKHH2Q8IVE3 1493 aa20.8■□□□□ 0.92
LSM7-207ENST00000591745 MBD5Q9P267 1494 aa20.8■□□□□ 0.92
LSM7-207ENST00000591745 MYOM3Q5VTT5 1437 aa20.79■□□□□ 0.92
LSM7-207ENST00000591745 ZC3H13Q5T200 1668 aaKnown RBP20.79■□□□□ 0.92
LSM7-207ENST00000591745 NPHP4O75161 1426 aaPredicted RBP20.78■□□□□ 0.92
LSM7-207ENST00000591745 KDM5DQ9BY66 1539 aa20.78■□□□□ 0.92
LSM7-207ENST00000591745 SYNMO15061 1565 aa20.77■□□□□ 0.92
LSM7-207ENST00000591745 FGD6Q6ZV73 1430 aa20.76■□□□□ 0.91
LSM7-207ENST00000591745 UGGT1Q9NYU2 1555 aa20.76■□□□□ 0.91
LSM7-207ENST00000591745 HRCP23327 699 aa20.75■□□□□ 0.91
LSM7-207ENST00000591745 CFDP1Q9UEE9 299 aaPredicted RBP20.75■□□□□ 0.91
LSM7-207ENST00000591745 ACIN1Q9UKV3 1341 aaKnown RBP20.75■□□□□ 0.91
LSM7-207ENST00000591745 SETD1AO15047 1707 aaKnown RBP20.74■□□□□ 0.91
LSM7-207ENST00000591745 DHX29Q7Z478 1369 aaKnown RBP20.72■□□□□ 0.91
LSM7-207ENST00000591745 ANKLE2Q86XL3 938 aa20.7■□□□□ 0.9
LSM7-207ENST00000591745 RTEL1-TNFRSF6BF6WH68 1400 aa20.7■□□□□ 0.9
LSM7-207ENST00000591745 NLRP1Q9C000 1473 aa20.69■□□□□ 0.9
LSM7-207ENST00000591745 FAM135AQ9P2D6 1515 aa20.69■□□□□ 0.9
LSM7-207ENST00000591745 KIF3BO15066 747 aa20.67■□□□□ 0.9
LSM7-207ENST00000591745 UBR1Q8IWV7 1749 aa20.67■□□□□ 0.9
LSM7-207ENST00000591745 CFAP65Q6ZU64 1925 aaKnown RBP20.65■□□□□ 0.9
LSM7-207ENST00000591745 POTEAQ6S8J7 498 aa20.65■□□□□ 0.9
LSM7-207ENST00000591745 FAM50AQ14320 339 aaKnown RBP20.64■□□□□ 0.89
LSM7-207ENST00000591745 CLSPNQ9HAW4 1339 aa20.63■□□□□ 0.89
LSM7-207ENST00000591745 THEMISQ8N1K5 641 aaPredicted RBP20.63■□□□□ 0.89
LSM7-207ENST00000591745 CEP152O94986 1710 aa20.62■□□□□ 0.89
LSM7-207ENST00000591745 MROH1Q8NDA8 1641 aa20.62■□□□□ 0.89
LSM7-207ENST00000591745 PTPN23Q9H3S7 1636 aa20.62■□□□□ 0.89
LSM7-207ENST00000591745 ABCC3O15438 1527 aa20.61■□□□□ 0.89
LSM7-207ENST00000591745 CCDC141Q6ZP82 1450 aa20.61■□□□□ 0.89
LSM7-207ENST00000591745 WASHC2CQ9Y4E1 1318 aa20.6■□□□□ 0.89
LSM7-207ENST00000591745 CAMSAP2Q08AD1 1489 aa20.6■□□□□ 0.89
LSM7-207ENST00000591745 ERVK-7P63135 1459 aa20.59■□□□□ 0.89
LSM7-207ENST00000591745 NCBP3Q53F19 620 aaKnown RBP20.59■□□□□ 0.89
LSM7-207ENST00000591745 CCER1Q8TC90 406 aaPredicted RBP20.59■□□□□ 0.89
LSM7-207ENST00000591745 ROBO1Q9Y6N7 1651 aa20.56■□□□□ 0.88
LSM7-207ENST00000591745 SETD5Q9C0A6 1442 aa20.54■□□□□ 0.88
LSM7-207ENST00000591745 RSPH4AQ5TD94 716 aa20.54■□□□□ 0.88
LSM7-207ENST00000591745 SCAF11Q99590 1463 aaKnown RBP20.54■□□□□ 0.88
LSM7-207ENST00000591745 ARHGAP23Q9P227 1491 aa20.53■□□□□ 0.88
LSM7-207ENST00000591745 ARHGEF5Q12774 1597 aa20.52■□□□□ 0.88
LSM7-207ENST00000591745 MSH5O43196 834 aa20.52■□□□□ 0.88
LSM7-207ENST00000591745 LTKP29376 864 aa20.52■□□□□ 0.88
LSM7-207ENST00000591745 SLIT1O75093 1534 aa20.51■□□□□ 0.87
LSM7-207ENST00000591745 ROCK1Q13464 1354 aa20.49■□□□□ 0.87
LSM7-207ENST00000591745 HFM1A2PYH4 1435 aa20.49■□□□□ 0.87
LSM7-207ENST00000591745 FAM135BQ49AJ0 1406 aa20.49■□□□□ 0.87
LSM7-207ENST00000591745 EIF2AK4Q9P2K8 1649 aaKnown RBP20.49■□□□□ 0.87
LSM7-207ENST00000591745 PIK3C2BO00750 1634 aa20.48■□□□□ 0.87
LSM7-207ENST00000591745 ITGAEP38570 1179 aa20.46■□□□□ 0.87
LSM7-207ENST00000591745 MAST1Q9Y2H9 1570 aa20.46■□□□□ 0.87
LSM7-207ENST00000591745 PHLPP1O60346 1717 aa20.43■□□□□ 0.86
LSM7-207ENST00000591745 TMEM94Q12767 1356 aa20.43■□□□□ 0.86
LSM7-207ENST00000591745 RBM33Q96EV2 1170 aaKnown RBP20.42■□□□□ 0.86
LSM7-207ENST00000591745 RAB3GAP2Q9H2M9 1393 aa20.42■□□□□ 0.86
LSM7-207ENST00000591745 DAPK1P53355 1430 aa20.41■□□□□ 0.86
LSM7-207ENST00000591745 TXNDC2Q86VQ3 553 aa20.4■□□□□ 0.86
LSM7-207ENST00000591745 TET3O43151 1660 aa20.38■□□□□ 0.85
LSM7-207ENST00000591745 LRP6O75581 1613 aa20.38■□□□□ 0.85
LSM7-207ENST00000591745 COL16A1Q07092 1604 aaPredicted RBP20.38■□□□□ 0.85
LSM7-207ENST00000591745 NWD1Q149M9 1564 aa20.38■□□□□ 0.85
LSM7-207ENST00000591745 PRDM15P57071 1507 aaPredicted RBP20.37■□□□□ 0.85
LSM7-207ENST00000591745 ABCC5O15440 1437 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms