RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 KDM4FA0A1W2PPD8 638 aa25.99■■□□□ 1.75
AP3D1-211ENST00000591650 KIF3BO15066 747 aa25.99■■□□□ 1.75
AP3D1-211ENST00000591650 SETD5Q9C0A6 1442 aa25.99■■□□□ 1.75
AP3D1-211ENST00000591650 MLECQ14165 292 aa25.98■■□□□ 1.75
AP3D1-211ENST00000591650 ADAMTSL3P82987 1691 aa25.98■■□□□ 1.75
AP3D1-211ENST00000591650 CEP152O94986 1710 aa25.98■■□□□ 1.75
AP3D1-211ENST00000591650 MADDQ8WXG6 1647 aa25.97■■□□□ 1.75
AP3D1-211ENST00000591650 VWDEQ8N2E2 1590 aa25.94■■□□□ 1.74
AP3D1-211ENST00000591650 RAB3GAP2Q9H2M9 1393 aa25.94■■□□□ 1.74
AP3D1-211ENST00000591650 CLTCQ00610 1675 aaKnown RBP25.94■■□□□ 1.74
AP3D1-211ENST00000591650 ZC3H13Q5T200 1668 aaKnown RBP25.94■■□□□ 1.74
AP3D1-211ENST00000591650 RIMS1Q86UR5 1692 aaKnown RBP25.92■■□□□ 1.74
AP3D1-211ENST00000591650 KDM5DQ9BY66 1539 aa25.92■■□□□ 1.74
AP3D1-211ENST00000591650 IQGAP3Q86VI3 1631 aa25.92■■□□□ 1.74
AP3D1-211ENST00000591650 ABCC3O15438 1527 aa25.91■■□□□ 1.74
AP3D1-211ENST00000591650 FAM135AQ9P2D6 1515 aa25.91■■□□□ 1.74
AP3D1-211ENST00000591650 GGT6Q6P531 493 aa25.9■■□□□ 1.74
AP3D1-211ENST00000591650 PCGF6Q9BYE7 350 aa25.9■■□□□ 1.74
AP3D1-211ENST00000591650 CAMSAP1Q5T5Y3 1602 aa25.88■■□□□ 1.73
AP3D1-211ENST00000591650 MROH2AA6NES4 1674 aa25.87■■□□□ 1.73
AP3D1-211ENST00000591650 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.85■■□□□ 1.734e-10■■□□□ 13.2
AP3D1-211ENST00000591650 TET3O43151 1660 aa25.85■■□□□ 1.73
AP3D1-211ENST00000591650 LMTK2Q8IWU2 1503 aa25.83■■□□□ 1.73
AP3D1-211ENST00000591650 KANK1Q14678 1352 aa25.82■■□□□ 1.72
AP3D1-211ENST00000591650 PZPP20742 1482 aa25.82■■□□□ 1.72
AP3D1-211ENST00000591650 EFCAB6Q5THR3 1501 aa25.82■■□□□ 1.72
AP3D1-211ENST00000591650 C3P01024 1663 aa25.81■■□□□ 1.72
AP3D1-211ENST00000591650 NUP155O75694 1391 aa25.81■■□□□ 1.72
AP3D1-211ENST00000591650 CNTLNQ9NXG0 1405 aa25.79■■□□□ 1.72
AP3D1-211ENST00000591650 E9PCH4 1651 aa25.78■■□□□ 1.72
AP3D1-211ENST00000591650 WASHC2CQ9Y4E1 1318 aa25.77■■□□□ 1.72
AP3D1-211ENST00000591650 PPP6R1Q9UPN7 881 aa25.77■■□□□ 1.72
AP3D1-211ENST00000591650 TRIM52Q96A61 297 aa25.75■■□□□ 1.71
AP3D1-211ENST00000591650 PTPRMP28827 1452 aa25.74■■□□□ 1.71
AP3D1-211ENST00000591650 ESF1Q9H501 851 aaKnown RBP25.72■■□□□ 1.71
AP3D1-211ENST00000591650 HRCP23327 699 aa25.71■■□□□ 1.71
AP3D1-211ENST00000591650 CFAP65Q6ZU64 1925 aaKnown RBP25.71■■□□□ 1.71
AP3D1-211ENST00000591650 PREX1Q8TCU6 1659 aa25.71■■□□□ 1.71
AP3D1-211ENST00000591650 NPATQ14207 1427 aa25.71■■□□□ 1.71
AP3D1-211ENST00000591650 CEBPAP49715 358 aaPredicted RBP25.7■■□□□ 1.7
AP3D1-211ENST00000591650 ARHGAP31Q2M1Z3 1444 aa25.68■■□□□ 1.7
AP3D1-211ENST00000591650 PLPPR3Q6T4P5 718 aa25.68■■□□□ 1.7
AP3D1-211ENST00000591650 ZMYM3Q14202 1370 aa25.68■■□□□ 1.7
AP3D1-211ENST00000591650 ACIN1Q9UKV3 1341 aaKnown RBP25.67■■□□□ 1.7
AP3D1-211ENST00000591650 SPHKAPQ2M3C7 1700 aa25.66■■□□□ 1.7
AP3D1-211ENST00000591650 RPRD2Q5VT52 1461 aaKnown RBP25.65■■□□□ 1.7
AP3D1-211ENST00000591650 SPATA31D1Q6ZQQ2 1576 aa25.64■■□□□ 1.7
AP3D1-211ENST00000591650 ERVK-7P63135 1459 aa25.64■■□□□ 1.69
AP3D1-211ENST00000591650 SLC4A1APQ9BWU0 796 aaKnown RBP25.63■■□□□ 1.69
AP3D1-211ENST00000591650 SYNMO15061 1565 aa25.62■■□□□ 1.69
AP3D1-211ENST00000591650 MPHOSPH9Q99550 1183 aa25.62■■□□□ 1.69
AP3D1-211ENST00000591650 AEBP2Q6ZN18 517 aaPredicted RBP25.61■■□□□ 1.69
AP3D1-211ENST00000591650 PKD2Q13563 968 aa25.59■■□□□ 1.69
AP3D1-211ENST00000591650 MYO3AQ8NEV4 1616 aa25.58■■□□□ 1.69
AP3D1-211ENST00000591650 FBXO31Q5XUX0 539 aaPredicted RBP25.57■■□□□ 1.68
AP3D1-211ENST00000591650 NOS1P29475 1434 aa25.57■■□□□ 1.68
AP3D1-211ENST00000591650 DHX57Q6P158 1386 aaKnown RBP25.56■■□□□ 1.68
AP3D1-211ENST00000591650 TRPM2O94759 1503 aa25.56■■□□□ 1.68
AP3D1-211ENST00000591650 FOXD1Q16676 465 aa25.55■■□□□ 1.68
AP3D1-211ENST00000591650 UGGT1Q9NYU2 1555 aa25.55■■□□□ 1.68
AP3D1-211ENST00000591650 PIK3C2BO00750 1634 aa25.54■■□□□ 1.68
AP3D1-211ENST00000591650 PLA2R1Q13018 1463 aa25.53■■□□□ 1.68
AP3D1-211ENST00000591650 PTPRTO14522 1441 aa25.53■■□□□ 1.68
AP3D1-211ENST00000591650 TNRQ92752 1358 aa25.52■■□□□ 1.68
AP3D1-211ENST00000591650 CLTCL1P53675 1640 aa25.52■■□□□ 1.68
AP3D1-211ENST00000591650 ZNF142P52746 1687 aaPredicted RBP25.51■■□□□ 1.67
AP3D1-211ENST00000591650 SETD1BQ9UPS6 1966 aaKnown RBP25.48■■□□□ 1.67
AP3D1-211ENST00000591650 CEP170BQ9Y4F5 1589 aaPredicted RBP25.45■■□□□ 1.67
AP3D1-211ENST00000591650 MYO5BQ9ULV0 1848 aa25.44■■□□□ 1.66
AP3D1-211ENST00000591650 NLRP1Q9C000 1473 aa25.44■■□□□ 1.66
AP3D1-211ENST00000591650 ANKRD30BQ9BXX2 1392 aa25.44■■□□□ 1.66
AP3D1-211ENST00000591650 UBR1Q8IWV7 1749 aa25.43■■□□□ 1.66
AP3D1-211ENST00000591650 ADGRB3O60242 1522 aa25.42■■□□□ 1.66
AP3D1-211ENST00000591650 KIF1BO60333 1816 aa25.42■■□□□ 1.66
AP3D1-211ENST00000591650 KDM5AP29375 1690 aaKnown RBP25.4■■□□□ 1.66
AP3D1-211ENST00000591650 A2ML1A8K2U0 1454 aa25.4■■□□□ 1.66
AP3D1-211ENST00000591650 UHRF1BP1Q6BDS2 1440 aa25.39■■□□□ 1.66
AP3D1-211ENST00000591650 CCDC144AA2RUR9 1427 aa25.39■■□□□ 1.65
AP3D1-211ENST00000591650 TMEM131LA2VDJ0 1609 aa25.39■■□□□ 1.65
AP3D1-211ENST00000591650 LMTK3Q96Q04 1460 aa25.38■■□□□ 1.65
AP3D1-211ENST00000591650 IDI1Q13907 227 aa25.35■■□□□ 1.65
AP3D1-211ENST00000591650 SLC52A1Q9NWF4 448 aa25.34■■□□□ 1.65
AP3D1-211ENST00000591650 HSPA2P54652 639 aa25.31■■□□□ 1.64
AP3D1-211ENST00000591650 NEURL4Q96JN8 1562 aa25.29■■□□□ 1.64
AP3D1-211ENST00000591650 SPATA31E1Q6ZUB1 1445 aa25.28■■□□□ 1.64
AP3D1-211ENST00000591650 IFT172Q9UG01 1749 aa25.26■■□□□ 1.63
AP3D1-211ENST00000591650 CCER1Q8TC90 406 aaPredicted RBP25.25■■□□□ 1.63
AP3D1-211ENST00000591650 CHGAP10645 457 aaKnown RBP25.24■■□□□ 1.63
AP3D1-211ENST00000591650 PPLO60437 1756 aa25.24■■□□□ 1.63
AP3D1-211ENST00000591650 SIN3AQ96ST3 1273 aa25.23■■□□□ 1.63
AP3D1-211ENST00000591650 POLR1AO95602 1720 aaPredicted RBP25.23■■□□□ 1.63
AP3D1-211ENST00000591650 SLIT1O75093 1534 aa25.22■■□□□ 1.63
AP3D1-211ENST00000591650 NEXMIFQ5QGS0 1516 aa25.22■■□□□ 1.63
AP3D1-211ENST00000591650 ARHGAP23Q9P227 1491 aa25.22■■□□□ 1.63
AP3D1-211ENST00000591650 STAG3Q9UJ98 1225 aa25.21■■□□□ 1.63
AP3D1-211ENST00000591650 CLSPNQ9HAW4 1339 aa25.19■■□□□ 1.62
AP3D1-211ENST00000591650 ZFYVE9O95405 1425 aa25.19■■□□□ 1.62
AP3D1-211ENST00000591650 TMEM2Q9UHN6 1383 aa25.18■■□□□ 1.62
AP3D1-211ENST00000591650 THEMISQ8N1K5 641 aaPredicted RBP25.17■■□□□ 1.62
AP3D1-211ENST00000591650 RIMS2Q9UQ26 1411 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms