RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 TIAM1Q13009 1591 aa15.99■□□□□ 0.15
RETREG3-211ENST00000591547 MBD5Q9P267 1494 aa15.97■□□□□ 0.15
RETREG3-211ENST00000591547 SHANK2Q9UPX8 1470 aa15.97■□□□□ 0.15
RETREG3-211ENST00000591547 MTUS2Q5JR59 1369 aa15.97■□□□□ 0.15
RETREG3-211ENST00000591547 ALKQ9UM73 1620 aa15.96■□□□□ 0.15
RETREG3-211ENST00000591547 TNRQ92752 1358 aa15.96■□□□□ 0.15
RETREG3-211ENST00000591547 KIF3BO15066 747 aa15.95■□□□□ 0.14
RETREG3-211ENST00000591547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.95■□□□□ 0.14
RETREG3-211ENST00000591547 VWDEQ8N2E2 1590 aa15.95■□□□□ 0.14
RETREG3-211ENST00000591547 TOM1O60784 492 aa15.94■□□□□ 0.14
RETREG3-211ENST00000591547 DHX29Q7Z478 1369 aaKnown RBP15.94■□□□□ 0.14
RETREG3-211ENST00000591547 CPS1P31327 1500 aa15.94■□□□□ 0.14
RETREG3-211ENST00000591547 STRCP1A6NGW2 1772 aa15.92■□□□□ 0.14
RETREG3-211ENST00000591547 PZPP20742 1482 aa15.91■□□□□ 0.14
RETREG3-211ENST00000591547 KDM5DQ9BY66 1539 aa15.9■□□□□ 0.14
RETREG3-211ENST00000591547 ANKLE2Q86XL3 938 aa15.9■□□□□ 0.14
RETREG3-211ENST00000591547 RTEL1-TNFRSF6BF6WH68 1400 aa15.9■□□□□ 0.14
RETREG3-211ENST00000591547 WASHC2CQ9Y4E1 1318 aa15.9■□□□□ 0.14
RETREG3-211ENST00000591547 NPHP4O75161 1426 aaPredicted RBP15.88■□□□□ 0.13
RETREG3-211ENST00000591547 EHBP1L1Q8N3D4 1523 aa15.88■□□□□ 0.13
RETREG3-211ENST00000591547 UGGT1Q9NYU2 1555 aa15.87■□□□□ 0.13
RETREG3-211ENST00000591547 MIA2Q96PC5 1412 aa15.87■□□□□ 0.13
RETREG3-211ENST00000591547 PHF23Q9BUL5 403 aaPredicted RBP15.87■□□□□ 0.13
RETREG3-211ENST00000591547 IQGAP1P46940 1657 aa15.86■□□□□ 0.13
RETREG3-211ENST00000591547 CAMSAP2Q08AD1 1489 aa15.86■□□□□ 0.13
RETREG3-211ENST00000591547 THEMISQ8N1K5 641 aaPredicted RBP15.86■□□□□ 0.13
RETREG3-211ENST00000591547 CCDC141Q6ZP82 1450 aa15.85■□□□□ 0.13
RETREG3-211ENST00000591547 CEP162Q5TB80 1403 aa15.85■□□□□ 0.13
RETREG3-211ENST00000591547 MED14O60244 1454 aa15.84■□□□□ 0.13
RETREG3-211ENST00000591547 DEPDC5O75140 1603 aa15.84■□□□□ 0.13
RETREG3-211ENST00000591547 CFAP65Q6ZU64 1925 aaKnown RBP15.84■□□□□ 0.13
RETREG3-211ENST00000591547 LRRC7Q96NW7 1537 aa15.84■□□□□ 0.13
RETREG3-211ENST00000591547 NCOA2Q15596 1464 aa15.83■□□□□ 0.12
RETREG3-211ENST00000591547 NLRP1Q9C000 1473 aa15.83■□□□□ 0.12
RETREG3-211ENST00000591547 FAM135AQ9P2D6 1515 aa15.83■□□□□ 0.12
RETREG3-211ENST00000591547 ZC3H13Q5T200 1668 aaKnown RBP15.79■□□□□ 0.12
RETREG3-211ENST00000591547 RGS17Q9UGC6 210 aaPredicted RBP15.79■□□□□ 0.12
RETREG3-211ENST00000591547 CEP152O94986 1710 aa15.79■□□□□ 0.12
RETREG3-211ENST00000591547 ABCC3O15438 1527 aa15.78■□□□□ 0.12
RETREG3-211ENST00000591547 RNF17Q9BXT8 1623 aaKnown RBP15.78■□□□□ 0.12
RETREG3-211ENST00000591547 XIRP1Q702N8 1843 aaKnown RBP15.78■□□□□ 0.12
RETREG3-211ENST00000591547 UBR1Q8IWV7 1749 aa15.77■□□□□ 0.12
RETREG3-211ENST00000591547 ARHGEF5Q12774 1597 aa15.77■□□□□ 0.11
RETREG3-211ENST00000591547 ERVK-7P63135 1459 aa15.76■□□□□ 0.11
RETREG3-211ENST00000591547 MROH1Q8NDA8 1641 aa15.76■□□□□ 0.11
RETREG3-211ENST00000591547 SYNMO15061 1565 aa15.75■□□□□ 0.11
RETREG3-211ENST00000591547 TSPY4P0CV99 314 aa15.75■□□□□ 0.11
RETREG3-211ENST00000591547 TSPY10P0CW01 314 aa15.75■□□□□ 0.11
RETREG3-211ENST00000591547 LTKP29376 864 aa15.74■□□□□ 0.11
RETREG3-211ENST00000591547 RSPH4AQ5TD94 716 aa15.74■□□□□ 0.11
RETREG3-211ENST00000591547 MAST1Q9Y2H9 1570 aa15.7■□□□□ 0.1
RETREG3-211ENST00000591547 TXNDC2Q86VQ3 553 aa15.7■□□□□ 0.1
RETREG3-211ENST00000591547 SCAF11Q99590 1463 aaKnown RBP15.7■□□□□ 0.1
RETREG3-211ENST00000591547 EIF2AK4Q9P2K8 1649 aaKnown RBP15.69■□□□□ 0.1
RETREG3-211ENST00000591547 RBM33Q96EV2 1170 aaKnown RBP15.69■□□□□ 0.1
RETREG3-211ENST00000591547 POTEAQ6S8J7 498 aa15.68■□□□□ 0.1
RETREG3-211ENST00000591547 ARHGAP23Q9P227 1491 aa15.67■□□□□ 0.1
RETREG3-211ENST00000591547 PIK3C2BO00750 1634 aa15.67■□□□□ 0.1
RETREG3-211ENST00000591547 KANK4Q5T7N3 995 aaPredicted RBP15.66■□□□□ 0.1
RETREG3-211ENST00000591547 SLIT1O75093 1534 aa15.66■□□□□ 0.1
RETREG3-211ENST00000591547 LRRC9Q6ZRR7 1453 aa15.65■□□□□ 0.1
RETREG3-211ENST00000591547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.64■□□□□ 0.09
RETREG3-211ENST00000591547 ROBO1Q9Y6N7 1651 aa15.63■□□□□ 0.09
RETREG3-211ENST00000591547 SETD1AO15047 1707 aaKnown RBP15.63■□□□□ 0.09
RETREG3-211ENST00000591547 DUOX2Q9NRD8 1548 aa15.62■□□□□ 0.09
RETREG3-211ENST00000591547 TMEM94Q12767 1356 aa15.62■□□□□ 0.09
RETREG3-211ENST00000591547 SLC26A8Q96RN1 970 aa15.61■□□□□ 0.09
RETREG3-211ENST00000591547 RRP7BPQ9NSQ0 103 aa15.61■□□□□ 0.09
RETREG3-211ENST00000591547 FAM135BQ49AJ0 1406 aa15.6■□□□□ 0.09
RETREG3-211ENST00000591547 EID1Q9Y6B2 187 aa15.6■□□□□ 0.09
RETREG3-211ENST00000591547 TMEM2Q9UHN6 1383 aa15.6■□□□□ 0.09
RETREG3-211ENST00000591547 PRDM15P57071 1507 aaPredicted RBP15.59■□□□□ 0.09
RETREG3-211ENST00000591547 MAP3K1Q13233 1512 aa15.59■□□□□ 0.09
RETREG3-211ENST00000591547 ARHGAP31Q2M1Z3 1444 aa15.59■□□□□ 0.09
RETREG3-211ENST00000591547 MYOM3Q5VTT5 1437 aa15.59■□□□□ 0.09
RETREG3-211ENST00000591547 PROSER2Q86WR7 435 aaPredicted RBP15.58■□□□□ 0.08
RETREG3-211ENST00000591547 STAG3Q9UJ98 1225 aa15.58■□□□□ 0.08
RETREG3-211ENST00000591547 KIF15Q9NS87 1388 aa15.58■□□□□ 0.08
RETREG3-211ENST00000591547 CROCC2H7BZ55 1655 aa15.57■□□□□ 0.08
RETREG3-211ENST00000591547 IDI1Q13907 227 aa15.57■□□□□ 0.08
RETREG3-211ENST00000591547 TET3O43151 1660 aa15.57■□□□□ 0.08
RETREG3-211ENST00000591547 LOC105371045A0A1W2PR82 267 aa15.56■□□□□ 0.08
RETREG3-211ENST00000591547 KCNA6P17658 529 aa15.56■□□□□ 0.08
RETREG3-211ENST00000591547 ABCC5O15440 1437 aa15.56■□□□□ 0.08
RETREG3-211ENST00000591547 VPS8Q8N3P4 1428 aa15.56■□□□□ 0.08
RETREG3-211ENST00000591547 EFCAB6Q5THR3 1501 aa15.55■□□□□ 0.08
RETREG3-211ENST00000591547 PHLPP1O60346 1717 aa15.54■□□□□ 0.08
RETREG3-211ENST00000591547 ERBINQ96RT1 1412 aa15.53■□□□□ 0.08
RETREG3-211ENST00000591547 CHIC2Q9UKJ5 165 aa15.53■□□□□ 0.08
RETREG3-211ENST00000591547 PTPN23Q9H3S7 1636 aa15.52■□□□□ 0.08
RETREG3-211ENST00000591547 BCANQ96GW7 911 aa15.51■□□□□ 0.07
RETREG3-211ENST00000591547 MYO5BQ9ULV0 1848 aa15.51■□□□□ 0.07
RETREG3-211ENST00000591547 KDM5AP29375 1690 aaKnown RBP15.51■□□□□ 0.07
RETREG3-211ENST00000591547 NWD1Q149M9 1564 aa15.5■□□□□ 0.07
RETREG3-211ENST00000591547 DAPK1P53355 1430 aa15.5■□□□□ 0.07
RETREG3-211ENST00000591547 ADGRB3O60242 1522 aa15.49■□□□□ 0.07
RETREG3-211ENST00000591547 SLAIN2Q9P270 581 aa15.49■□□□□ 0.07
RETREG3-211ENST00000591547 KANK1Q14678 1352 aa15.49■□□□□ 0.07
RETREG3-211ENST00000591547 LMTK2Q8IWU2 1503 aa15.48■□□□□ 0.07
RETREG3-211ENST00000591547 NOS1P29475 1434 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms