RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 WASHC2CQ9Y4E1 1318 aa27.35■■□□□ 1.97
CROCCP3-205ENST00000591316 RAB3GAP2Q9H2M9 1393 aa27.33■■□□□ 1.97
CROCCP3-205ENST00000591316 EIF2AK4Q9P2K8 1649 aaKnown RBP27.32■■□□□ 1.96
CROCCP3-205ENST00000591316 GCC2Q8IWJ2 1684 aa27.32■■□□□ 1.96
CROCCP3-205ENST00000591316 PLPPR3Q6T4P5 718 aa27.32■■□□□ 1.96
CROCCP3-205ENST00000591316 KDM4FA0A1W2PPD8 638 aa27.31■■□□□ 1.96
CROCCP3-205ENST00000591316 PPP6R1Q9UPN7 881 aa27.31■■□□□ 1.96
CROCCP3-205ENST00000591316 NUP155O75694 1391 aa27.3■■□□□ 1.96
CROCCP3-205ENST00000591316 BCORL1Q5H9F3 1711 aa27.3■■□□□ 1.96
CROCCP3-205ENST00000591316 KANK1Q14678 1352 aa27.29■■□□□ 1.96
CROCCP3-205ENST00000591316 RNF17Q9BXT8 1623 aaKnown RBP27.24■■□□□ 1.95
CROCCP3-205ENST00000591316 CEBPAP49715 358 aaPredicted RBP27.22■■□□□ 1.95
CROCCP3-205ENST00000591316 MROH1Q8NDA8 1641 aa27.22■■□□□ 1.95
CROCCP3-205ENST00000591316 HRCP23327 699 aa27.22■■□□□ 1.95
CROCCP3-205ENST00000591316 ADAMTSL3P82987 1691 aa27.21■■□□□ 1.95
CROCCP3-205ENST00000591316 DEPDC5O75140 1603 aa27.2■■□□□ 1.94
CROCCP3-205ENST00000591316 MADDQ8WXG6 1647 aa27.2■■□□□ 1.94
CROCCP3-205ENST00000591316 SLC4A1APQ9BWU0 796 aaKnown RBP27.19■■□□□ 1.94
CROCCP3-205ENST00000591316 ZMYM3Q14202 1370 aa27.19■■□□□ 1.94
CROCCP3-205ENST00000591316 PRDM15P57071 1507 aaPredicted RBP27.19■■□□□ 1.94
CROCCP3-205ENST00000591316 UNC13BO14795 1591 aa27.17■■□□□ 1.94
CROCCP3-205ENST00000591316 CNTLNQ9NXG0 1405 aa27.16■■□□□ 1.94
CROCCP3-205ENST00000591316 KDM5DQ9BY66 1539 aa27.16■■□□□ 1.94
CROCCP3-205ENST00000591316 CLTCQ00610 1675 aaKnown RBP27.16■■□□□ 1.94
CROCCP3-205ENST00000591316 FER1L4A9Z1Z3 1794 aa27.16■■□□□ 1.94
CROCCP3-205ENST00000591316 ACIN1Q9UKV3 1341 aaKnown RBP27.16■■□□□ 1.94
CROCCP3-205ENST00000591316 ABCC3O15438 1527 aa27.15■■□□□ 1.94
CROCCP3-205ENST00000591316 MPHOSPH9Q99550 1183 aa27.15■■□□□ 1.94
CROCCP3-205ENST00000591316 RIMS1Q86UR5 1692 aaKnown RBP27.14■■□□□ 1.93
CROCCP3-205ENST00000591316 FBXO31Q5XUX0 539 aaPredicted RBP27.13■■□□□ 1.93
CROCCP3-205ENST00000591316 VWDEQ8N2E2 1590 aa27.12■■□□□ 1.93
CROCCP3-205ENST00000591316 CEP152O94986 1710 aa27.12■■□□□ 1.93
CROCCP3-205ENST00000591316 FAM135AQ9P2D6 1515 aa27.11■■□□□ 1.93
CROCCP3-205ENST00000591316 PKD2Q13563 968 aa27.11■■□□□ 1.93
CROCCP3-205ENST00000591316 FOXD1Q16676 465 aa27.09■■□□□ 1.93
CROCCP3-205ENST00000591316 PTPRMP28827 1452 aa27.09■■□□□ 1.93
CROCCP3-205ENST00000591316 PZPP20742 1482 aa27.08■■□□□ 1.93
CROCCP3-205ENST00000591316 IQGAP3Q86VI3 1631 aa27.08■■□□□ 1.93
CROCCP3-205ENST00000591316 LMTK2Q8IWU2 1503 aa27.07■■□□□ 1.92
CROCCP3-205ENST00000591316 ZC3H13Q5T200 1668 aaKnown RBP27.05■■□□□ 1.92
CROCCP3-205ENST00000591316 NPATQ14207 1427 aa27.04■■□□□ 1.92
CROCCP3-205ENST00000591316 CAMSAP1Q5T5Y3 1602 aa27.03■■□□□ 1.92
CROCCP3-205ENST00000591316 CFAP65Q6ZU64 1925 aaKnown RBP27.01■■□□□ 1.91
CROCCP3-205ENST00000591316 ARHGAP31Q2M1Z3 1444 aa27.01■■□□□ 1.91
CROCCP3-205ENST00000591316 C3P01024 1663 aa27.01■■□□□ 1.91
CROCCP3-205ENST00000591316 TET3O43151 1660 aa27■■□□□ 1.91
CROCCP3-205ENST00000591316 MROH2AA6NES4 1674 aa27■■□□□ 1.91
CROCCP3-205ENST00000591316 EFCAB6Q5THR3 1501 aa26.99■■□□□ 1.91
CROCCP3-205ENST00000591316 E9PCH4 1651 aa26.95■■□□□ 1.91
CROCCP3-205ENST00000591316 RPRD2Q5VT52 1461 aaKnown RBP26.93■■□□□ 1.9
CROCCP3-205ENST00000591316 TNRQ92752 1358 aa26.93■■□□□ 1.9
CROCCP3-205ENST00000591316 ERVK-7P63135 1459 aa26.92■■□□□ 1.9
CROCCP3-205ENST00000591316 DHX57Q6P158 1386 aaKnown RBP26.9■■□□□ 1.9
CROCCP3-205ENST00000591316 NOS1P29475 1434 aa26.89■■□□□ 1.89
CROCCP3-205ENST00000591316 IDI1Q13907 227 aa26.88■■□□□ 1.89
CROCCP3-205ENST00000591316 PREX1Q8TCU6 1659 aa26.87■■□□□ 1.89
CROCCP3-205ENST00000591316 SPATA31D1Q6ZQQ2 1576 aa26.86■■□□□ 1.89
CROCCP3-205ENST00000591316 CHGAP10645 457 aaKnown RBP26.85■■□□□ 1.89
CROCCP3-205ENST00000591316 SLC52A1Q9NWF4 448 aa26.85■■□□□ 1.89
CROCCP3-205ENST00000591316 PTPRTO14522 1441 aa26.84■■□□□ 1.89
CROCCP3-205ENST00000591316 PLA2R1Q13018 1463 aa26.84■■□□□ 1.89
CROCCP3-205ENST00000591316 STAG3Q9UJ98 1225 aa26.84■■□□□ 1.89
CROCCP3-205ENST00000591316 CCER1Q8TC90 406 aaPredicted RBP26.81■■□□□ 1.88
CROCCP3-205ENST00000591316 ANKRD30BQ9BXX2 1392 aa26.81■■□□□ 1.88
CROCCP3-205ENST00000591316 SYNMO15061 1565 aa26.8■■□□□ 1.88
CROCCP3-205ENST00000591316 SETD1BQ9UPS6 1966 aaKnown RBP26.8■■□□□ 1.88
CROCCP3-205ENST00000591316 UGGT1Q9NYU2 1555 aa26.8■■□□□ 1.88
CROCCP3-205ENST00000591316 UHRF1BP1Q6BDS2 1440 aa26.79■■□□□ 1.88
CROCCP3-205ENST00000591316 SPHKAPQ2M3C7 1700 aa26.78■■□□□ 1.88
CROCCP3-205ENST00000591316 CCDC144AA2RUR9 1427 aa26.76■■□□□ 1.87
CROCCP3-205ENST00000591316 SIN3AQ96ST3 1273 aa26.76■■□□□ 1.87
CROCCP3-205ENST00000591316 NEUROD1Q13562 356 aa26.75■■□□□ 1.87
CROCCP3-205ENST00000591316 NLRP1Q9C000 1473 aa26.74■■□□□ 1.87
CROCCP3-205ENST00000591316 TRPM2O94759 1503 aa26.74■■□□□ 1.87
CROCCP3-205ENST00000591316 HSPA2P54652 639 aa26.73■■□□□ 1.87
CROCCP3-205ENST00000591316 RGL3Q3MIN7 710 aa26.72■■□□□ 1.87
CROCCP3-205ENST00000591316 THEMISQ8N1K5 641 aaPredicted RBP26.71■■□□□ 1.87
CROCCP3-205ENST00000591316 MYO3AQ8NEV4 1616 aa26.71■■□□□ 1.87
CROCCP3-205ENST00000591316 ZNF326Q5BKZ1 582 aaKnown RBP26.71■■□□□ 1.87
CROCCP3-205ENST00000591316 A2ML1A8K2U0 1454 aa26.7■■□□□ 1.87
CROCCP3-205ENST00000591316 CLTCL1P53675 1640 aa26.7■■□□□ 1.86
CROCCP3-205ENST00000591316 PIK3C2BO00750 1634 aa26.68■■□□□ 1.86
CROCCP3-205ENST00000591316 CEP170BQ9Y4F5 1589 aaPredicted RBP26.67■■□□□ 1.86
CROCCP3-205ENST00000591316 LMTK3Q96Q04 1460 aa26.65■■□□□ 1.86
CROCCP3-205ENST00000591316 NUTM2DQ5VT03 806 aaPredicted RBP26.64■■□□□ 1.86
CROCCP3-205ENST00000591316 SENP3Q9H4L4 574 aaPredicted RBP26.6■■□□□ 1.85
CROCCP3-205ENST00000591316 TXNDC2Q86VQ3 553 aa26.59■■□□□ 1.85
CROCCP3-205ENST00000591316 ADGRB3O60242 1522 aa26.59■■□□□ 1.85
CROCCP3-205ENST00000591316 TMEM131LA2VDJ0 1609 aa26.59■■□□□ 1.85
CROCCP3-205ENST00000591316 UBR1Q8IWV7 1749 aa26.58■■□□□ 1.85
CROCCP3-205ENST00000591316 KIF1BO60333 1816 aa26.58■■□□□ 1.84
CROCCP3-205ENST00000591316 TMEM2Q9UHN6 1383 aa26.57■■□□□ 1.84
CROCCP3-205ENST00000591316 ANKLE2Q86XL3 938 aa26.57■■□□□ 1.84
CROCCP3-205ENST00000591316 EID1Q9Y6B2 187 aa26.57■■□□□ 1.84
CROCCP3-205ENST00000591316 ZNF142P52746 1687 aaPredicted RBP26.56■■□□□ 1.84
CROCCP3-205ENST00000591316 CLSPNQ9HAW4 1339 aa26.56■■□□□ 1.84
CROCCP3-205ENST00000591316 NCKAP5LQ9HCH0 1330 aa26.56■■□□□ 1.84
CROCCP3-205ENST00000591316 LTKP29376 864 aa26.56■■□□□ 1.84
CROCCP3-205ENST00000591316 HDGFP51858 240 aaKnown RBP26.56■■□□□ 1.84
CROCCP3-205ENST00000591316 SPATA31E1Q6ZUB1 1445 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms