RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 FAM135AQ9P2D6 1515 aa18.13■□□□□ 0.49
APOC1-206ENST00000590334 ZC3H13Q5T200 1668 aaKnown RBP18.12■□□□□ 0.49
APOC1-206ENST00000590334 FER1L4A9Z1Z3 1794 aa18.12■□□□□ 0.49
APOC1-206ENST00000590334 KIF3BO15066 747 aa18.11■□□□□ 0.49
APOC1-206ENST00000590334 VWDEQ8N2E2 1590 aa18.11■□□□□ 0.49
APOC1-206ENST00000590334 KDM5DQ9BY66 1539 aa18.09■□□□□ 0.49
APOC1-206ENST00000590334 ARID4BQ4LE39 1312 aaPredicted RBP18.09■□□□□ 0.49
APOC1-206ENST00000590334 CEP152O94986 1710 aa18.09■□□□□ 0.49
APOC1-206ENST00000590334 MROH2AA6NES4 1674 aa18.09■□□□□ 0.49
APOC1-206ENST00000590334 IQGAP3Q86VI3 1631 aa18.09■□□□□ 0.49
APOC1-206ENST00000590334 CLTCQ00610 1675 aaKnown RBP18.08■□□□□ 0.48
APOC1-206ENST00000590334 PPP6R1Q9UPN7 881 aa18.07■□□□□ 0.48
APOC1-206ENST00000590334 MADDQ8WXG6 1647 aa18.07■□□□□ 0.48
APOC1-206ENST00000590334 RAB3GAP2Q9H2M9 1393 aa18.06■□□□□ 0.48
APOC1-206ENST00000590334 ACIN1Q9UKV3 1341 aaKnown RBP18.06■□□□□ 0.48
APOC1-206ENST00000590334 LMTK2Q8IWU2 1503 aa18.05■□□□□ 0.48
APOC1-206ENST00000590334 HRCP23327 699 aa18.05■□□□□ 0.48
APOC1-206ENST00000590334 ABCC3O15438 1527 aa18.04■□□□□ 0.48
APOC1-206ENST00000590334 GGT6Q6P531 493 aa18.04■□□□□ 0.48
APOC1-206ENST00000590334 CAMSAP1Q5T5Y3 1602 aa18.04■□□□□ 0.48
APOC1-206ENST00000590334 TET3O43151 1660 aa18.03■□□□□ 0.48
APOC1-206ENST00000590334 RIMS1Q86UR5 1692 aaKnown RBP18.03■□□□□ 0.48
APOC1-206ENST00000590334 KANK1Q14678 1352 aa18.02■□□□□ 0.47
APOC1-206ENST00000590334 CNTLNQ9NXG0 1405 aa18.01■□□□□ 0.47
APOC1-206ENST00000590334 MLECQ14165 292 aa18.01■□□□□ 0.47
APOC1-206ENST00000590334 PCGF6Q9BYE7 350 aa18.01■□□□□ 0.47
APOC1-206ENST00000590334 C3P01024 1663 aa18■□□□□ 0.47
APOC1-206ENST00000590334 EFCAB6Q5THR3 1501 aa17.99■□□□□ 0.47
APOC1-206ENST00000590334 NUP155O75694 1391 aa17.98■□□□□ 0.47
APOC1-206ENST00000590334 PZPP20742 1482 aa17.98■□□□□ 0.47
APOC1-206ENST00000590334 E9PCH4 1651 aa17.98■□□□□ 0.47
APOC1-206ENST00000590334 WASHC2CQ9Y4E1 1318 aa17.98■□□□□ 0.47
APOC1-206ENST00000590334 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.97■□□□□ 0.471e-9■□□□□ 10.7
APOC1-206ENST00000590334 ARHGAP31Q2M1Z3 1444 aa17.96■□□□□ 0.47
APOC1-206ENST00000590334 KDM4FA0A1W2PPD8 638 aa17.94■□□□□ 0.46
APOC1-206ENST00000590334 PREX1Q8TCU6 1659 aa17.93■□□□□ 0.46
APOC1-206ENST00000590334 TRIM52Q96A61 297 aa17.93■□□□□ 0.46
APOC1-206ENST00000590334 ESF1Q9H501 851 aaKnown RBP17.93■□□□□ 0.46
APOC1-206ENST00000590334 RPRD2Q5VT52 1461 aaKnown RBP17.93■□□□□ 0.46
APOC1-206ENST00000590334 ZMYM3Q14202 1370 aa17.92■□□□□ 0.46
APOC1-206ENST00000590334 PTPRMP28827 1452 aa17.92■□□□□ 0.46
APOC1-206ENST00000590334 CFAP65Q6ZU64 1925 aaKnown RBP17.92■□□□□ 0.46
APOC1-206ENST00000590334 NPATQ14207 1427 aa17.9■□□□□ 0.46
APOC1-206ENST00000590334 SPHKAPQ2M3C7 1700 aa17.9■□□□□ 0.46
APOC1-206ENST00000590334 SPATA31D1Q6ZQQ2 1576 aa17.89■□□□□ 0.45
APOC1-206ENST00000590334 MPHOSPH9Q99550 1183 aa17.87■□□□□ 0.45
APOC1-206ENST00000590334 SLC4A1APQ9BWU0 796 aaKnown RBP17.87■□□□□ 0.45
APOC1-206ENST00000590334 ERVK-7P63135 1459 aa17.85■□□□□ 0.45
APOC1-206ENST00000590334 SETD1BQ9UPS6 1966 aaKnown RBP17.84■□□□□ 0.45
APOC1-206ENST00000590334 SYNMO15061 1565 aa17.84■□□□□ 0.45
APOC1-206ENST00000590334 NOS1P29475 1434 aa17.84■□□□□ 0.45
APOC1-206ENST00000590334 PIK3C2BO00750 1634 aa17.83■□□□□ 0.45
APOC1-206ENST00000590334 PTPRTO14522 1441 aa17.83■□□□□ 0.45
APOC1-206ENST00000590334 PKD2Q13563 968 aa17.83■□□□□ 0.44
APOC1-206ENST00000590334 CEBPAP49715 358 aaPredicted RBP17.82■□□□□ 0.44
APOC1-206ENST00000590334 TRPM2O94759 1503 aa17.82■□□□□ 0.44
APOC1-206ENST00000590334 MYO3AQ8NEV4 1616 aa17.81■□□□□ 0.44
APOC1-206ENST00000590334 DHX57Q6P158 1386 aaKnown RBP17.8■□□□□ 0.44
APOC1-206ENST00000590334 KDM5AP29375 1690 aaKnown RBP17.8■□□□□ 0.44
APOC1-206ENST00000590334 ZNF142P52746 1687 aaPredicted RBP17.8■□□□□ 0.44
APOC1-206ENST00000590334 FBXO31Q5XUX0 539 aaPredicted RBP17.79■□□□□ 0.44
APOC1-206ENST00000590334 PLA2R1Q13018 1463 aa17.79■□□□□ 0.44
APOC1-206ENST00000590334 CLTCL1P53675 1640 aa17.77■□□□□ 0.44
APOC1-206ENST00000590334 TNRQ92752 1358 aa17.77■□□□□ 0.43
APOC1-206ENST00000590334 KIF1BO60333 1816 aa17.76■□□□□ 0.43
APOC1-206ENST00000590334 NLRP1Q9C000 1473 aa17.75■□□□□ 0.43
APOC1-206ENST00000590334 FOXD1Q16676 465 aa17.75■□□□□ 0.43
APOC1-206ENST00000590334 ANKRD30BQ9BXX2 1392 aa17.75■□□□□ 0.43
APOC1-206ENST00000590334 UBR1Q8IWV7 1749 aa17.75■□□□□ 0.43
APOC1-206ENST00000590334 MYO5BQ9ULV0 1848 aa17.74■□□□□ 0.43
APOC1-206ENST00000590334 UGGT1Q9NYU2 1555 aa17.74■□□□□ 0.43
APOC1-206ENST00000590334 CEP170BQ9Y4F5 1589 aaPredicted RBP17.73■□□□□ 0.43
APOC1-206ENST00000590334 TMEM131LA2VDJ0 1609 aa17.72■□□□□ 0.43
APOC1-206ENST00000590334 SLC52A1Q9NWF4 448 aa17.72■□□□□ 0.43
APOC1-206ENST00000590334 A2ML1A8K2U0 1454 aa17.71■□□□□ 0.43
APOC1-206ENST00000590334 PLPPR3Q6T4P5 718 aa17.71■□□□□ 0.43
APOC1-206ENST00000590334 NEURL4Q96JN8 1562 aa17.7■□□□□ 0.42
APOC1-206ENST00000590334 ADGRB3O60242 1522 aa17.7■□□□□ 0.42
APOC1-206ENST00000590334 UHRF1BP1Q6BDS2 1440 aa17.69■□□□□ 0.42
APOC1-206ENST00000590334 CCDC144AA2RUR9 1427 aa17.68■□□□□ 0.42
APOC1-206ENST00000590334 IDI1Q13907 227 aa17.68■□□□□ 0.42
APOC1-206ENST00000590334 LMTK3Q96Q04 1460 aa17.66■□□□□ 0.42
APOC1-206ENST00000590334 CLSPNQ9HAW4 1339 aa17.65■□□□□ 0.42
APOC1-206ENST00000590334 IFT172Q9UG01 1749 aa17.64■□□□□ 0.41
APOC1-206ENST00000590334 SPATA31E1Q6ZUB1 1445 aa17.63■□□□□ 0.41
APOC1-206ENST00000590334 PPLO60437 1756 aa17.62■□□□□ 0.41
APOC1-206ENST00000590334 SLIT1O75093 1534 aa17.61■□□□□ 0.41
APOC1-206ENST00000590334 POLR1AO95602 1720 aaPredicted RBP17.61■□□□□ 0.41
APOC1-206ENST00000590334 ARHGAP23Q9P227 1491 aa17.6■□□□□ 0.41
APOC1-206ENST00000590334 NEXMIFQ5QGS0 1516 aa17.58■□□□□ 0.41
APOC1-206ENST00000590334 THEMISQ8N1K5 641 aaPredicted RBP17.58■□□□□ 0.4
APOC1-206ENST00000590334 CCER1Q8TC90 406 aaPredicted RBP17.58■□□□□ 0.4
APOC1-206ENST00000590334 ZFYVE9O95405 1425 aa17.56■□□□□ 0.4
APOC1-206ENST00000590334 STRCQ7RTU9 1775 aa17.56■□□□□ 0.4
APOC1-206ENST00000590334 TMEM2Q9UHN6 1383 aa17.55■□□□□ 0.4
APOC1-206ENST00000590334 AEBP2Q6ZN18 517 aaPredicted RBP17.55■□□□□ 0.4
APOC1-206ENST00000590334 SIN3AQ96ST3 1273 aa17.55■□□□□ 0.4
APOC1-206ENST00000590334 STAG3Q9UJ98 1225 aa17.55■□□□□ 0.4
APOC1-206ENST00000590334 CHGAP10645 457 aaKnown RBP17.54■□□□□ 0.4
APOC1-206ENST00000590334 RPGRIP1LQ68CZ1 1315 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms