RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 KIF15Q9NS87 1388 aa33.15■■■□□ 2.9
LRP3-202ENST00000590275 CHIC2Q9UKJ5 165 aa33.15■■■□□ 2.9
LRP3-202ENST00000590275 FAM50AQ14320 339 aaKnown RBP33.13■■■□□ 2.89
LRP3-202ENST00000590275 DUOX2Q9NRD8 1548 aa33.12■■■□□ 2.89
LRP3-202ENST00000590275 MROH1Q8NDA8 1641 aa33.11■■■□□ 2.89
LRP3-202ENST00000590275 KDM5DQ9BY66 1539 aa33.11■■■□□ 2.89
LRP3-202ENST00000590275 RNF17Q9BXT8 1623 aaKnown RBP33.1■■■□□ 2.89
LRP3-202ENST00000590275 FBXO31Q5XUX0 539 aaPredicted RBP33.1■■■□□ 2.89
LRP3-202ENST00000590275 SETD1BQ9UPS6 1966 aaKnown RBP33.09■■■□□ 2.89
LRP3-202ENST00000590275 WASHC2CQ9Y4E1 1318 aa33.08■■■□□ 2.89
LRP3-202ENST00000590275 NCOA1Q15788 1441 aa33.06■■■□□ 2.88
LRP3-202ENST00000590275 EIF2AK4Q9P2K8 1649 aaKnown RBP33.06■■■□□ 2.88
LRP3-202ENST00000590275 ABCC3O15438 1527 aa33.03■■■□□ 2.88
LRP3-202ENST00000590275 FAM135AQ9P2D6 1515 aa33.03■■■□□ 2.88
LRP3-202ENST00000590275 PZPP20742 1482 aa33.02■■■□□ 2.88
LRP3-202ENST00000590275 ERBINQ96RT1 1412 aa33.02■■■□□ 2.88
LRP3-202ENST00000590275 ADGRL2O95490 1459 aa33.01■■■□□ 2.88
LRP3-202ENST00000590275 STRCQ7RTU9 1775 aa33.01■■■□□ 2.87
LRP3-202ENST00000590275 ANKRD30AQ9BXX3 1397 aa33■■■□□ 2.87
LRP3-202ENST00000590275 MYO3AQ8NEV4 1616 aa32.99■■■□□ 2.87
LRP3-202ENST00000590275 PRDM15P57071 1507 aaPredicted RBP32.93■■■□□ 2.86
LRP3-202ENST00000590275 TNRQ92752 1358 aa32.93■■■□□ 2.86
LRP3-202ENST00000590275 CEP170BQ9Y4F5 1589 aaPredicted RBP32.92■■■□□ 2.86
LRP3-202ENST00000590275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.9■■■□□ 2.86
LRP3-202ENST00000590275 CAMSAP1Q5T5Y3 1602 aa32.9■■■□□ 2.86
LRP3-202ENST00000590275 ZNF142P52746 1687 aaPredicted RBP32.9■■■□□ 2.86
LRP3-202ENST00000590275 CEP152O94986 1710 aa32.88■■■□□ 2.85
LRP3-202ENST00000590275 DEPDC5O75140 1603 aa32.88■■■□□ 2.85
LRP3-202ENST00000590275 ZC3H13Q5T200 1668 aaKnown RBP32.88■■■□□ 2.85
LRP3-202ENST00000590275 A2ML1A8K2U0 1454 aa32.86■■■□□ 2.85
LRP3-202ENST00000590275 ILDR1Q86SU0 546 aaPredicted RBP32.86■■■□□ 2.85
LRP3-202ENST00000590275 NCKAP5LQ9HCH0 1330 aa32.85■■■□□ 2.85
LRP3-202ENST00000590275 ERVK-7P63135 1459 aa32.83■■■□□ 2.85
LRP3-202ENST00000590275 ITGAEP38570 1179 aa32.83■■■□□ 2.85
LRP3-202ENST00000590275 SPATA31D1Q6ZQQ2 1576 aa32.83■■■□□ 2.85
LRP3-202ENST00000590275 VWDEQ8N2E2 1590 aa32.83■■■□□ 2.85
LRP3-202ENST00000590275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.83■■■□□ 2.85
LRP3-202ENST00000590275 ANKRD50Q9ULJ7 1429 aa32.82■■■□□ 2.84
LRP3-202ENST00000590275 PTPRTO14522 1441 aa32.8■■■□□ 2.84
LRP3-202ENST00000590275 RRBP1Q9P2E9 1410 aaKnown RBP32.79■■■□□ 2.84
LRP3-202ENST00000590275 ARHGAP31Q2M1Z3 1444 aa32.78■■■□□ 2.84
LRP3-202ENST00000590275 ROCK1Q13464 1354 aa32.78■■■□□ 2.84
LRP3-202ENST00000590275 PLA2R1Q13018 1463 aa32.78■■■□□ 2.84
LRP3-202ENST00000590275 DMRT2Q9Y5R5 561 aa32.76■■■□□ 2.83
LRP3-202ENST00000590275 LMTK2Q8IWU2 1503 aa32.76■■■□□ 2.83
LRP3-202ENST00000590275 NLRP1Q9C000 1473 aa32.74■■■□□ 2.83
LRP3-202ENST00000590275 KANK1Q14678 1352 aa32.72■■■□□ 2.83
LRP3-202ENST00000590275 PKD2Q13563 968 aa32.68■■■□□ 2.82
LRP3-202ENST00000590275 UGGT1Q9NYU2 1555 aa32.67■■■□□ 2.82
LRP3-202ENST00000590275 CERKQ8TCT0 537 aa32.65■■■□□ 2.82
LRP3-202ENST00000590275 EFCAB6Q5THR3 1501 aa32.64■■■□□ 2.82
LRP3-202ENST00000590275 CFAP65Q6ZU64 1925 aaKnown RBP32.64■■■□□ 2.82
LRP3-202ENST00000590275 NEURL4Q96JN8 1562 aa32.63■■■□□ 2.81
LRP3-202ENST00000590275 UNC13BO14795 1591 aa32.62■■■□□ 2.81
LRP3-202ENST00000590275 THEMISQ8N1K5 641 aaPredicted RBP32.61■■■□□ 2.81
LRP3-202ENST00000590275 LTBP4Q8N2S1 1624 aa32.61■■■□□ 2.81
LRP3-202ENST00000590275 FBXO41Q8TF61 875 aa32.6■■■□□ 2.81
LRP3-202ENST00000590275 NOS1P29475 1434 aa32.6■■■□□ 2.81
LRP3-202ENST00000590275 SYNMO15061 1565 aa32.58■■■□□ 2.81
LRP3-202ENST00000590275 ZNF335Q9H4Z2 1342 aaPredicted RBP32.57■■■□□ 2.8
LRP3-202ENST00000590275 IDI1Q13907 227 aa32.55■■■□□ 2.8
LRP3-202ENST00000590275 UBR1Q8IWV7 1749 aa32.54■■■□□ 2.8
LRP3-202ENST00000590275 ANKLE2Q86XL3 938 aa32.53■■■□□ 2.8
LRP3-202ENST00000590275 NAIPQ13075 1403 aa32.51■■■□□ 2.8
LRP3-202ENST00000590275 PIK3C2BO00750 1634 aa32.51■■■□□ 2.79
LRP3-202ENST00000590275 TET3O43151 1660 aa32.5■■■□□ 2.79
LRP3-202ENST00000590275 POLR1AO95602 1720 aaPredicted RBP32.49■■■□□ 2.79
LRP3-202ENST00000590275 NUP155O75694 1391 aa32.49■■■□□ 2.79
LRP3-202ENST00000590275 MED14O60244 1454 aa32.48■■■□□ 2.79
LRP3-202ENST00000590275 LTKP29376 864 aa32.48■■■□□ 2.79
LRP3-202ENST00000590275 ARHGAP23Q9P227 1491 aa32.48■■■□□ 2.79
LRP3-202ENST00000590275 IQGAP3Q86VI3 1631 aa32.47■■■□□ 2.79
LRP3-202ENST00000590275 RPRD2Q5VT52 1461 aaKnown RBP32.47■■■□□ 2.79
LRP3-202ENST00000590275 NPHP4O75161 1426 aaPredicted RBP32.46■■■□□ 2.79
LRP3-202ENST00000590275 SLIT1O75093 1534 aa32.44■■■□□ 2.78
LRP3-202ENST00000590275 E9PCH4 1651 aa32.43■■■□□ 2.78
LRP3-202ENST00000590275 GCC2Q8IWJ2 1684 aa32.41■■■□□ 2.78
LRP3-202ENST00000590275 TMEM2Q9UHN6 1383 aa32.4■■■□□ 2.78
LRP3-202ENST00000590275 SCAF11Q99590 1463 aaKnown RBP32.39■■■□□ 2.78
LRP3-202ENST00000590275 HFM1A2PYH4 1435 aa32.38■■■□□ 2.77
LRP3-202ENST00000590275 TXNDC2Q86VQ3 553 aa32.38■■■□□ 2.77
LRP3-202ENST00000590275 SLC52A1Q9NWF4 448 aa32.38■■■□□ 2.77
LRP3-202ENST00000590275 ADGRB3O60242 1522 aa32.36■■■□□ 2.77
LRP3-202ENST00000590275 IQGAP1P46940 1657 aa32.34■■■□□ 2.77
LRP3-202ENST00000590275 STAG3Q9UJ98 1225 aa32.34■■■□□ 2.77
LRP3-202ENST00000590275 KDM5AP29375 1690 aaKnown RBP32.31■■■□□ 2.76
LRP3-202ENST00000590275 TMEM131LA2VDJ0 1609 aa32.26■■■□□ 2.76
LRP3-202ENST00000590275 IQSEC2Q5JU85 1478 aa32.26■■■□□ 2.75
LRP3-202ENST00000590275 EID1Q9Y6B2 187 aa32.25■■■□□ 2.75
LRP3-202ENST00000590275 ZFYVE9O95405 1425 aa32.25■■■□□ 2.75
LRP3-202ENST00000590275 STRCP1A6NGW2 1772 aa32.22■■■□□ 2.75
LRP3-202ENST00000590275 MYO5BQ9ULV0 1848 aa32.2■■■□□ 2.75
LRP3-202ENST00000590275 CPS1P31327 1500 aa32.2■■■□□ 2.74
LRP3-202ENST00000590275 TRIM52Q96A61 297 aa32.19■■■□□ 2.74
LRP3-202ENST00000590275 SENP3Q9H4L4 574 aaPredicted RBP32.19■■■□□ 2.74
LRP3-202ENST00000590275 RIMS2Q9UQ26 1411 aa32.18■■■□□ 2.74
LRP3-202ENST00000590275 CHGAP10645 457 aaKnown RBP32.18■■■□□ 2.74
LRP3-202ENST00000590275 SLC26A8Q96RN1 970 aa32.16■■■□□ 2.74
LRP3-202ENST00000590275 NUTM2DQ5VT03 806 aaPredicted RBP32.14■■■□□ 2.74
LRP3-202ENST00000590275 SPHKAPQ2M3C7 1700 aa32.12■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms