RNA–Protein interactions for RNA: ENST00000590234.5

CXXC1-213, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-213ENST00000590234 NCOA1Q15788 1441 aa22.4■■□□□ 1.18
CXXC1-213ENST00000590234 ERBINQ96RT1 1412 aa22.4■■□□□ 1.18
CXXC1-213ENST00000590234 RRBP1Q9P2E9 1410 aaKnown RBP22.4■■□□□ 1.18
CXXC1-213ENST00000590234 RNF17Q9BXT8 1623 aaKnown RBP22.39■■□□□ 1.18
CXXC1-213ENST00000590234 CEBPAP49715 358 aaPredicted RBP22.39■■□□□ 1.17
CXXC1-213ENST00000590234 FAM135AQ9P2D6 1515 aa22.37■■□□□ 1.17
CXXC1-213ENST00000590234 PTPRKQ15262 1439 aa22.37■■□□□ 1.17
CXXC1-213ENST00000590234 KDM5DQ9BY66 1539 aa22.36■■□□□ 1.17
CXXC1-213ENST00000590234 ZMYM3Q14202 1370 aa22.35■■□□□ 1.17
CXXC1-213ENST00000590234 ITGAEP38570 1179 aa22.33■■□□□ 1.17
CXXC1-213ENST00000590234 MROH1Q8NDA8 1641 aa22.32■■□□□ 1.16
CXXC1-213ENST00000590234 WASHC2CQ9Y4E1 1318 aa22.31■■□□□ 1.16
CXXC1-213ENST00000590234 ZC3H13Q5T200 1668 aaKnown RBP22.31■■□□□ 1.16
CXXC1-213ENST00000590234 PREX1Q8TCU6 1659 aa22.31■■□□□ 1.16
CXXC1-213ENST00000590234 LMTK3Q96Q04 1460 aa22.31■■□□□ 1.16
CXXC1-213ENST00000590234 ROCK1Q13464 1354 aa22.31■■□□□ 1.16
CXXC1-213ENST00000590234 PRDM15P57071 1507 aaPredicted RBP22.3■■□□□ 1.16
CXXC1-213ENST00000590234 DEPDC5O75140 1603 aa22.29■■□□□ 1.16
CXXC1-213ENST00000590234 NPATQ14207 1427 aa22.28■■□□□ 1.16
CXXC1-213ENST00000590234 ANKRD50Q9ULJ7 1429 aa22.28■■□□□ 1.16
CXXC1-213ENST00000590234 ABCC3O15438 1527 aa22.27■■□□□ 1.16
CXXC1-213ENST00000590234 SETD1BQ9UPS6 1966 aaKnown RBP22.26■■□□□ 1.15
CXXC1-213ENST00000590234 UHRF1BP1Q6BDS2 1440 aa22.25■■□□□ 1.15
CXXC1-213ENST00000590234 CEP152O94986 1710 aa22.25■■□□□ 1.15
CXXC1-213ENST00000590234 PZPP20742 1482 aa22.23■■□□□ 1.15
CXXC1-213ENST00000590234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.22■■□□□ 1.151e-9■■□□□ 13.7
CXXC1-213ENST00000590234 KANK1Q14678 1352 aa22.22■■□□□ 1.15
CXXC1-213ENST00000590234 CAMSAP1Q5T5Y3 1602 aa22.21■■□□□ 1.15
CXXC1-213ENST00000590234 MYO3AQ8NEV4 1616 aa22.19■■□□□ 1.14
CXXC1-213ENST00000590234 VWDEQ8N2E2 1590 aa22.18■■□□□ 1.14
CXXC1-213ENST00000590234 HSPA2P54652 639 aa22.18■■□□□ 1.14
CXXC1-213ENST00000590234 LMTK2Q8IWU2 1503 aa22.16■■□□□ 1.14
CXXC1-213ENST00000590234 FBXO31Q5XUX0 539 aaPredicted RBP22.16■■□□□ 1.14
CXXC1-213ENST00000590234 UNC13BO14795 1591 aa22.16■■□□□ 1.14
CXXC1-213ENST00000590234 TNRQ92752 1358 aa22.14■■□□□ 1.14
CXXC1-213ENST00000590234 ZNF142P52746 1687 aaPredicted RBP22.14■■□□□ 1.14
CXXC1-213ENST00000590234 ARHGAP31Q2M1Z3 1444 aa22.14■■□□□ 1.13
CXXC1-213ENST00000590234 GCC2Q8IWJ2 1684 aa22.14■■□□□ 1.13
CXXC1-213ENST00000590234 SPATA31D1Q6ZQQ2 1576 aa22.12■■□□□ 1.13
CXXC1-213ENST00000590234 CEP170BQ9Y4F5 1589 aaPredicted RBP22.12■■□□□ 1.13
CXXC1-213ENST00000590234 ERVK-7P63135 1459 aa22.11■■□□□ 1.13
CXXC1-213ENST00000590234 NAIPQ13075 1403 aa22.11■■□□□ 1.13
CXXC1-213ENST00000590234 EFCAB6Q5THR3 1501 aa22.1■■□□□ 1.13
CXXC1-213ENST00000590234 HFM1A2PYH4 1435 aa22.09■■□□□ 1.13
CXXC1-213ENST00000590234 A2ML1A8K2U0 1454 aa22.09■■□□□ 1.13
CXXC1-213ENST00000590234 CFAP65Q6ZU64 1925 aaKnown RBP22.08■■□□□ 1.12
CXXC1-213ENST00000590234 TET3O43151 1660 aa22.07■■□□□ 1.12
CXXC1-213ENST00000590234 IQGAP3Q86VI3 1631 aa22.07■■□□□ 1.12
CXXC1-213ENST00000590234 NLRP1Q9C000 1473 aa22.07■■□□□ 1.12
CXXC1-213ENST00000590234 NUP155O75694 1391 aa22.04■■□□□ 1.12
CXXC1-213ENST00000590234 RPRD2Q5VT52 1461 aaKnown RBP22.03■■□□□ 1.12
CXXC1-213ENST00000590234 STRCQ7RTU9 1775 aa22.02■■□□□ 1.12
CXXC1-213ENST00000590234 UGGT1Q9NYU2 1555 aa22■■□□□ 1.11
CXXC1-213ENST00000590234 PLA2R1Q13018 1463 aa22■■□□□ 1.11
CXXC1-213ENST00000590234 E9PCH4 1651 aa21.98■■□□□ 1.11
CXXC1-213ENST00000590234 NOS1P29475 1434 aa21.97■■□□□ 1.11
CXXC1-213ENST00000590234 SYNMO15061 1565 aa21.97■■□□□ 1.11
CXXC1-213ENST00000590234 THEMISQ8N1K5 641 aaPredicted RBP21.94■■□□□ 1.1
CXXC1-213ENST00000590234 DMRT2Q9Y5R5 561 aa21.94■■□□□ 1.1
CXXC1-213ENST00000590234 UBR1Q8IWV7 1749 aa21.94■■□□□ 1.1
CXXC1-213ENST00000590234 PIK3C2BO00750 1634 aa21.93■■□□□ 1.1
CXXC1-213ENST00000590234 TRIM52Q96A61 297 aa21.92■■□□□ 1.1
CXXC1-213ENST00000590234 NCKAP5LQ9HCH0 1330 aa21.91■■□□□ 1.1
CXXC1-213ENST00000590234 PKD2Q13563 968 aa21.91■■□□□ 1.1
CXXC1-213ENST00000590234 PTPRTO14522 1441 aa21.9■■□□□ 1.1
CXXC1-213ENST00000590234 POLR1AO95602 1720 aaPredicted RBP21.9■■□□□ 1.1
CXXC1-213ENST00000590234 IDI1Q13907 227 aa21.89■■□□□ 1.09
CXXC1-213ENST00000590234 SLC52A1Q9NWF4 448 aa21.89■■□□□ 1.09
CXXC1-213ENST00000590234 SETD5Q9C0A6 1442 aa21.89■■□□□ 1.09
CXXC1-213ENST00000590234 KDM5AP29375 1690 aaKnown RBP21.88■■□□□ 1.09
CXXC1-213ENST00000590234 STAG3Q9UJ98 1225 aa21.87■■□□□ 1.09
CXXC1-213ENST00000590234 ADGRB3O60242 1522 aa21.86■■□□□ 1.09
CXXC1-213ENST00000590234 SPHKAPQ2M3C7 1700 aa21.86■■□□□ 1.09
CXXC1-213ENST00000590234 ANKLE2Q86XL3 938 aa21.85■■□□□ 1.09
CXXC1-213ENST00000590234 NEURL4Q96JN8 1562 aa21.85■■□□□ 1.09
CXXC1-213ENST00000590234 SLC4A1APQ9BWU0 796 aaKnown RBP21.83■■□□□ 1.09
CXXC1-213ENST00000590234 SLIT1O75093 1534 aa21.83■■□□□ 1.09
CXXC1-213ENST00000590234 ARHGAP23Q9P227 1491 aa21.83■■□□□ 1.08
CXXC1-213ENST00000590234 ACIN1Q9UKV3 1341 aaKnown RBP21.82■■□□□ 1.08
CXXC1-213ENST00000590234 RAB3GAP2Q9H2M9 1393 aa21.81■■□□□ 1.08
CXXC1-213ENST00000590234 MED14O60244 1454 aa21.8■■□□□ 1.08
CXXC1-213ENST00000590234 TMEM2Q9UHN6 1383 aa21.8■■□□□ 1.08
CXXC1-213ENST00000590234 SCAF11Q99590 1463 aaKnown RBP21.79■■□□□ 1.08
CXXC1-213ENST00000590234 TMEM131LA2VDJ0 1609 aa21.79■■□□□ 1.08
CXXC1-213ENST00000590234 TRPM2O94759 1503 aa21.79■■□□□ 1.08
CXXC1-213ENST00000590234 NPHP4O75161 1426 aaPredicted RBP21.78■■□□□ 1.08
CXXC1-213ENST00000590234 IQGAP1P46940 1657 aa21.77■■□□□ 1.08
CXXC1-213ENST00000590234 EID1Q9Y6B2 187 aa21.77■■□□□ 1.08
CXXC1-213ENST00000590234 MYO5BQ9ULV0 1848 aa21.77■■□□□ 1.08
CXXC1-213ENST00000590234 CHGAP10645 457 aaKnown RBP21.76■■□□□ 1.07
CXXC1-213ENST00000590234 TXNDC2Q86VQ3 553 aa21.75■■□□□ 1.07
CXXC1-213ENST00000590234 LTKP29376 864 aa21.74■■□□□ 1.07
CXXC1-213ENST00000590234 MPHOSPH9Q99550 1183 aa21.74■■□□□ 1.07
CXXC1-213ENST00000590234 CLTCL1P53675 1640 aa21.73■■□□□ 1.07
CXXC1-213ENST00000590234 FOXD1Q16676 465 aa21.7■■□□□ 1.06
CXXC1-213ENST00000590234 ZFYVE9O95405 1425 aa21.7■■□□□ 1.06
CXXC1-213ENST00000590234 RIMS2Q9UQ26 1411 aa21.7■■□□□ 1.06
CXXC1-213ENST00000590234 LTBP4Q8N2S1 1624 aa21.69■■□□□ 1.06
CXXC1-213ENST00000590234 HRCP23327 699 aa21.69■■□□□ 1.06
CXXC1-213ENST00000590234 ZNF335Q9H4Z2 1342 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms