RNA–Protein interactions for RNA: ENST00000589886.5

RANBP3-217, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 472 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-217ENST00000589886 RNF17Q9BXT8 1623 aaKnown RBP23.47■■□□□ 1.35
RANBP3-217ENST00000589886 PRDM15P57071 1507 aaPredicted RBP23.43■■□□□ 1.34
RANBP3-217ENST00000589886 KIF3BO15066 747 aa23.42■■□□□ 1.34
RANBP3-217ENST00000589886 MROH1Q8NDA8 1641 aa23.41■■□□□ 1.34
RANBP3-217ENST00000589886 IQGAP3Q86VI3 1631 aa23.41■■□□□ 1.34
RANBP3-217ENST00000589886 DHX57Q6P158 1386 aaKnown RBP23.4■■□□□ 1.34
RANBP3-217ENST00000589886 TRIM52Q96A61 297 aa23.4■■□□□ 1.34
RANBP3-217ENST00000589886 VWDEQ8N2E2 1590 aa23.4■■□□□ 1.34
RANBP3-217ENST00000589886 NUP155O75694 1391 aa23.4■■□□□ 1.34
RANBP3-217ENST00000589886 PZPP20742 1482 aa23.38■■□□□ 1.33
RANBP3-217ENST00000589886 SIGLEC1Q9BZZ2 1709 aa23.37■■□□□ 1.33
RANBP3-217ENST00000589886 KANK1Q14678 1352 aa23.37■■□□□ 1.33
RANBP3-217ENST00000589886 FAM135AQ9P2D6 1515 aa23.36■■□□□ 1.33
RANBP3-217ENST00000589886 MPHOSPH9Q99550 1183 aa23.34■■□□□ 1.33
RANBP3-217ENST00000589886 PPP6R1Q9UPN7 881 aa23.34■■□□□ 1.33
RANBP3-217ENST00000589886 LMTK2Q8IWU2 1503 aa23.33■■□□□ 1.33
RANBP3-217ENST00000589886 CLSPNQ9HAW4 1339 aa23.33■■□□□ 1.32
RANBP3-217ENST00000589886 ZC3H13Q5T200 1668 aaKnown RBP23.32■■□□□ 1.32
RANBP3-217ENST00000589886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.31■■□□□ 1.323e-7■□□□□ 11
RANBP3-217ENST00000589886 SLC4A1APQ9BWU0 796 aaKnown RBP23.3■■□□□ 1.32
RANBP3-217ENST00000589886 TET3O43151 1660 aa23.29■■□□□ 1.32
RANBP3-217ENST00000589886 GGT6Q6P531 493 aa23.29■■□□□ 1.32
RANBP3-217ENST00000589886 CCER1Q8TC90 406 aaPredicted RBP23.29■■□□□ 1.32
RANBP3-217ENST00000589886 ABCC3O15438 1527 aa23.27■■□□□ 1.32
RANBP3-217ENST00000589886 CEP152O94986 1710 aa23.25■■□□□ 1.31
RANBP3-217ENST00000589886 EFCAB6Q5THR3 1501 aa23.23■■□□□ 1.31
RANBP3-217ENST00000589886 ARID4BQ4LE39 1312 aaPredicted RBP23.23■■□□□ 1.31
RANBP3-217ENST00000589886 WASHC2CQ9Y4E1 1318 aa23.23■■□□□ 1.31
RANBP3-217ENST00000589886 PKD2Q13563 968 aa23.22■■□□□ 1.31
RANBP3-217ENST00000589886 RPRD2Q5VT52 1461 aaKnown RBP23.21■■□□□ 1.31
RANBP3-217ENST00000589886 CAMSAP1Q5T5Y3 1602 aa23.21■■□□□ 1.31
RANBP3-217ENST00000589886 E9PCH4 1651 aa23.2■■□□□ 1.3
RANBP3-217ENST00000589886 ARHGAP31Q2M1Z3 1444 aa23.2■■□□□ 1.3
RANBP3-217ENST00000589886 CNTLNQ9NXG0 1405 aa23.18■■□□□ 1.3
RANBP3-217ENST00000589886 ANKRD30BQ9BXX2 1392 aa23.17■■□□□ 1.3
RANBP3-217ENST00000589886 CLTCQ00610 1675 aaKnown RBP23.16■■□□□ 1.3
RANBP3-217ENST00000589886 MROH2AA6NES4 1674 aa23.16■■□□□ 1.3
RANBP3-217ENST00000589886 MLECQ14165 292 aa23.14■■□□□ 1.29
RANBP3-217ENST00000589886 PTPRTO14522 1441 aa23.13■■□□□ 1.29
RANBP3-217ENST00000589886 NPATQ14207 1427 aa23.13■■□□□ 1.29
RANBP3-217ENST00000589886 FOXD1Q16676 465 aa23.12■■□□□ 1.29
RANBP3-217ENST00000589886 SPHKAPQ2M3C7 1700 aa23.11■■□□□ 1.29
RANBP3-217ENST00000589886 ESF1Q9H501 851 aaKnown RBP23.11■■□□□ 1.29
RANBP3-217ENST00000589886 ADAMTSL3P82987 1691 aa23.11■■□□□ 1.29
RANBP3-217ENST00000589886 FER1L4A9Z1Z3 1794 aa23.11■■□□□ 1.29
RANBP3-217ENST00000589886 PLA2R1Q13018 1463 aa23.1■■□□□ 1.29
RANBP3-217ENST00000589886 TRPM2O94759 1503 aa23.09■■□□□ 1.29
RANBP3-217ENST00000589886 NOS1P29475 1434 aa23.07■■□□□ 1.28
RANBP3-217ENST00000589886 ZMYM3Q14202 1370 aa23.06■■□□□ 1.28
RANBP3-217ENST00000589886 PREX1Q8TCU6 1659 aa23.05■■□□□ 1.28
RANBP3-217ENST00000589886 MADDQ8WXG6 1647 aa23.04■■□□□ 1.28
RANBP3-217ENST00000589886 ZEB1P37275 1124 aaPredicted RBP23.03■■□□□ 1.28
RANBP3-217ENST00000589886 SPATA31D1Q6ZQQ2 1576 aa23.02■■□□□ 1.28
RANBP3-217ENST00000589886 CCDC144AA2RUR9 1427 aa23.02■■□□□ 1.28
RANBP3-217ENST00000589886 TIMELESSQ9UNS1 1208 aa23.02■■□□□ 1.28
RANBP3-217ENST00000589886 ERVK-7P63135 1459 aa23.02■■□□□ 1.28
RANBP3-217ENST00000589886 SIN3AQ96ST3 1273 aa23.01■■□□□ 1.27
RANBP3-217ENST00000589886 C3P01024 1663 aa23■■□□□ 1.27
RANBP3-217ENST00000589886 SYNMO15061 1565 aa22.99■■□□□ 1.27
RANBP3-217ENST00000589886 NEURL4Q96JN8 1562 aa22.98■■□□□ 1.27
RANBP3-217ENST00000589886 PIK3C2BO00750 1634 aa22.98■■□□□ 1.27
RANBP3-217ENST00000589886 CLTCL1P53675 1640 aa22.98■■□□□ 1.27
RANBP3-217ENST00000589886 RIMS1Q86UR5 1692 aaKnown RBP22.98■■□□□ 1.27
RANBP3-217ENST00000589886 CFAP65Q6ZU64 1925 aaKnown RBP22.96■■□□□ 1.27
RANBP3-217ENST00000589886 NEUROD1Q13562 356 aa22.95■■□□□ 1.26
RANBP3-217ENST00000589886 SLC52A1Q9NWF4 448 aa22.95■■□□□ 1.26
RANBP3-217ENST00000589886 FBXO31Q5XUX0 539 aaPredicted RBP22.94■■□□□ 1.26
RANBP3-217ENST00000589886 KIF1BO60333 1816 aa22.92■■□□□ 1.26
RANBP3-217ENST00000589886 UGGT1Q9NYU2 1555 aa22.91■■□□□ 1.26
RANBP3-217ENST00000589886 TONSLQ96HA7 1378 aa22.9■■□□□ 1.26
RANBP3-217ENST00000589886 SPATA31E1Q6ZUB1 1445 aa22.9■■□□□ 1.26
RANBP3-217ENST00000589886 TNRQ92752 1358 aa22.89■■□□□ 1.25
RANBP3-217ENST00000589886 PTPRMP28827 1452 aa22.87■■□□□ 1.25
RANBP3-217ENST00000589886 ADGRB3O60242 1522 aa22.87■■□□□ 1.25
RANBP3-217ENST00000589886 CEBPAP49715 358 aaPredicted RBP22.86■■□□□ 1.25
RANBP3-217ENST00000589886 IDI1Q13907 227 aa22.86■■□□□ 1.25
RANBP3-217ENST00000589886 KDM5AP29375 1690 aaKnown RBP22.86■■□□□ 1.25
RANBP3-217ENST00000589886 NLRP1Q9C000 1473 aa22.85■■□□□ 1.25
RANBP3-217ENST00000589886 TMEM131LA2VDJ0 1609 aa22.83■■□□□ 1.25
RANBP3-217ENST00000589886 L3MBTL2Q969R5 705 aa22.81■■□□□ 1.24
RANBP3-217ENST00000589886 STAC3Q96MF2 364 aa22.81■■□□□ 1.24
RANBP3-217ENST00000589886 KDM4FA0A1W2PPD8 638 aa22.79■■□□□ 1.24
RANBP3-217ENST00000589886 MYO3AQ8NEV4 1616 aa22.79■■□□□ 1.24
RANBP3-217ENST00000589886 SETD1BQ9UPS6 1966 aaKnown RBP22.78■■□□□ 1.24
RANBP3-217ENST00000589886 RPGRIP1LQ68CZ1 1315 aa22.78■■□□□ 1.24
RANBP3-217ENST00000589886 PPP1R15AO75807 674 aaPredicted RBP22.77■■□□□ 1.24
RANBP3-217ENST00000589886 IFT172Q9UG01 1749 aa22.77■■□□□ 1.23
RANBP3-217ENST00000589886 UBR1Q8IWV7 1749 aa22.76■■□□□ 1.23
RANBP3-217ENST00000589886 A2ML1A8K2U0 1454 aa22.75■■□□□ 1.23
RANBP3-217ENST00000589886 RGL3Q3MIN7 710 aa22.75■■□□□ 1.23
RANBP3-217ENST00000589886 MYO5BQ9ULV0 1848 aa22.74■■□□□ 1.23
RANBP3-217ENST00000589886 ZNF142P52746 1687 aaPredicted RBP22.74■■□□□ 1.23
RANBP3-217ENST00000589886 CHGAP10645 457 aaKnown RBP22.73■■□□□ 1.23
RANBP3-217ENST00000589886 PPLO60437 1756 aa22.73■■□□□ 1.23
RANBP3-217ENST00000589886 UHRF1BP1Q6BDS2 1440 aa22.73■■□□□ 1.23
RANBP3-217ENST00000589886 MYOM2P54296 1465 aa22.73■■□□□ 1.23
RANBP3-217ENST00000589886 DCAF11Q8TEB1 546 aa22.72■■□□□ 1.23
RANBP3-217ENST00000589886 NEXMIFQ5QGS0 1516 aa22.72■■□□□ 1.23
RANBP3-217ENST00000589886 CEP170BQ9Y4F5 1589 aaPredicted RBP22.72■■□□□ 1.23
RANBP3-217ENST00000589886 STAG3Q9UJ98 1225 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms