RNA–Protein interactions for RNA: ENST00000589878.5

LSM14A-207, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 4

Gene LSM14A, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-207ENST00000589878 HSPA1LP34931 641 aa29.59■■■□□ 2.33
LSM14A-207ENST00000589878 TNRQ92752 1358 aa29.59■■■□□ 2.33
LSM14A-207ENST00000589878 POLR1AO95602 1720 aaPredicted RBP29.59■■■□□ 2.33
LSM14A-207ENST00000589878 RTEL1-TNFRSF6BF6WH68 1400 aa29.58■■■□□ 2.33
LSM14A-207ENST00000589878 EHBP1L1Q8N3D4 1523 aa29.55■■■□□ 2.32
LSM14A-207ENST00000589878 TOM1O60784 492 aa29.54■■■□□ 2.32
LSM14A-207ENST00000589878 NEURL4Q96JN8 1562 aa29.54■■■□□ 2.32
LSM14A-207ENST00000589878 WASHC2CQ9Y4E1 1318 aa29.53■■■□□ 2.32
LSM14A-207ENST00000589878 SHANK2Q9UPX8 1470 aa29.52■■■□□ 2.32
LSM14A-207ENST00000589878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.51■■■□□ 2.31
LSM14A-207ENST00000589878 CPS1P31327 1500 aa29.5■■■□□ 2.31
LSM14A-207ENST00000589878 PZPP20742 1482 aa29.5■■■□□ 2.31
LSM14A-207ENST00000589878 ANKLE2Q86XL3 938 aa29.5■■■□□ 2.31
LSM14A-207ENST00000589878 CEP162Q5TB80 1403 aa29.5■■■□□ 2.31
LSM14A-207ENST00000589878 KDM5DQ9BY66 1539 aa29.5■■■□□ 2.31
LSM14A-207ENST00000589878 CCDC141Q6ZP82 1450 aa29.48■■■□□ 2.31
LSM14A-207ENST00000589878 MED1Q15648 1581 aaPredicted RBP29.47■■■□□ 2.31
LSM14A-207ENST00000589878 THEMISQ8N1K5 641 aaPredicted RBP29.47■■■□□ 2.31
LSM14A-207ENST00000589878 CAMSAP2Q08AD1 1489 aa29.45■■■□□ 2.31
LSM14A-207ENST00000589878 MIA2Q96PC5 1412 aa29.44■■■□□ 2.3
LSM14A-207ENST00000589878 VWDEQ8N2E2 1590 aa29.42■■■□□ 2.3
LSM14A-207ENST00000589878 SENP3Q9H4L4 574 aaPredicted RBP29.41■■■□□ 2.3
LSM14A-207ENST00000589878 UGGT1Q9NYU2 1555 aa29.41■■■□□ 2.3
LSM14A-207ENST00000589878 NCOA2Q15596 1464 aa29.41■■■□□ 2.3
LSM14A-207ENST00000589878 RSPH4AQ5TD94 716 aa29.4■■■□□ 2.3
LSM14A-207ENST00000589878 FAM135AQ9P2D6 1515 aa29.4■■■□□ 2.3
LSM14A-207ENST00000589878 NPHP4O75161 1426 aaPredicted RBP29.39■■■□□ 2.3
LSM14A-207ENST00000589878 NLRP1Q9C000 1473 aa29.39■■■□□ 2.3
LSM14A-207ENST00000589878 TSPY4P0CV99 314 aa29.37■■■□□ 2.29
LSM14A-207ENST00000589878 TSPY10P0CW01 314 aa29.37■■■□□ 2.29
LSM14A-207ENST00000589878 DEPDC5O75140 1603 aa29.34■■■□□ 2.29
LSM14A-207ENST00000589878 PHF23Q9BUL5 403 aaPredicted RBP29.34■■■□□ 2.29
LSM14A-207ENST00000589878 MED14O60244 1454 aa29.34■■■□□ 2.29
LSM14A-207ENST00000589878 IQGAP1P46940 1657 aa29.33■■■□□ 2.29
LSM14A-207ENST00000589878 ALKQ9UM73 1620 aa29.32■■■□□ 2.28
LSM14A-207ENST00000589878 ARHGEF5Q12774 1597 aa29.3■■■□□ 2.28
LSM14A-207ENST00000589878 STRCP1A6NGW2 1772 aa29.29■■■□□ 2.28
LSM14A-207ENST00000589878 CFAP65Q6ZU64 1925 aaKnown RBP29.28■■■□□ 2.28
LSM14A-207ENST00000589878 ABCC3O15438 1527 aa29.25■■■□□ 2.27
LSM14A-207ENST00000589878 RNF17Q9BXT8 1623 aaKnown RBP29.24■■■□□ 2.27
LSM14A-207ENST00000589878 LRRC7Q96NW7 1537 aa29.24■■■□□ 2.27
LSM14A-207ENST00000589878 ERVK-7P63135 1459 aa29.21■■■□□ 2.27
LSM14A-207ENST00000589878 ZC3H13Q5T200 1668 aaKnown RBP29.21■■■□□ 2.27
LSM14A-207ENST00000589878 CEP152O94986 1710 aa29.19■■■□□ 2.26
LSM14A-207ENST00000589878 MAST1Q9Y2H9 1570 aa29.17■■■□□ 2.26
LSM14A-207ENST00000589878 UBR1Q8IWV7 1749 aa29.16■■■□□ 2.26
LSM14A-207ENST00000589878 SYNMO15061 1565 aa29.15■■■□□ 2.26
LSM14A-207ENST00000589878 EIF2AK4Q9P2K8 1649 aaKnown RBP29.15■■■□□ 2.26
LSM14A-207ENST00000589878 MROH1Q8NDA8 1641 aa29.14■■■□□ 2.26
LSM14A-207ENST00000589878 LRRC9Q6ZRR7 1453 aa29.14■■■□□ 2.26
LSM14A-207ENST00000589878 LTKP29376 864 aa29.12■■■□□ 2.25
LSM14A-207ENST00000589878 TXNDC2Q86VQ3 553 aa29.12■■■□□ 2.25
LSM14A-207ENST00000589878 SCAF11Q99590 1463 aaKnown RBP29.11■■■□□ 2.25
LSM14A-207ENST00000589878 KANK4Q5T7N3 995 aaPredicted RBP29.08■■■□□ 2.25
LSM14A-207ENST00000589878 DUOX2Q9NRD8 1548 aa29.04■■■□□ 2.24
LSM14A-207ENST00000589878 XIRP1Q702N8 1843 aaKnown RBP29.04■■■□□ 2.24
LSM14A-207ENST00000589878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.04■■■□□ 2.247e-10■■□□□ 12.2
LSM14A-207ENST00000589878 EID1Q9Y6B2 187 aa29.04■■■□□ 2.24
LSM14A-207ENST00000589878 VPS8Q8N3P4 1428 aa29.03■■■□□ 2.24
LSM14A-207ENST00000589878 RGS17Q9UGC6 210 aaPredicted RBP29.02■■■□□ 2.24
LSM14A-207ENST00000589878 ARHGAP23Q9P227 1491 aa29.02■■■□□ 2.24
LSM14A-207ENST00000589878 MYOM3Q5VTT5 1437 aa29.02■■■□□ 2.24
LSM14A-207ENST00000589878 SLIT1O75093 1534 aa29.01■■■□□ 2.23
LSM14A-207ENST00000589878 RRP7BPQ9NSQ0 103 aa29.01■■■□□ 2.23
LSM14A-207ENST00000589878 STAG3Q9UJ98 1225 aa29■■■□□ 2.23
LSM14A-207ENST00000589878 KIF15Q9NS87 1388 aa28.98■■■□□ 2.23
LSM14A-207ENST00000589878 PIK3C2BO00750 1634 aa28.98■■■□□ 2.23
LSM14A-207ENST00000589878 LOC105371045A0A1W2PR82 267 aa28.97■■■□□ 2.23
LSM14A-207ENST00000589878 ARHGAP31Q2M1Z3 1444 aa28.96■■■□□ 2.23
LSM14A-207ENST00000589878 PRDM15P57071 1507 aaPredicted RBP28.94■■■□□ 2.22
LSM14A-207ENST00000589878 TMEM2Q9UHN6 1383 aa28.93■■■□□ 2.22
LSM14A-207ENST00000589878 RBM33Q96EV2 1170 aaKnown RBP28.92■■■□□ 2.22
LSM14A-207ENST00000589878 ABCC5O15440 1437 aa28.9■■■□□ 2.22
LSM14A-207ENST00000589878 ERBINQ96RT1 1412 aa28.9■■■□□ 2.22
LSM14A-207ENST00000589878 CROCC2H7BZ55 1655 aa28.89■■■□□ 2.22
LSM14A-207ENST00000589878 MAP3K1Q13233 1512 aa28.89■■■□□ 2.22
LSM14A-207ENST00000589878 TMEM94Q12767 1356 aa28.89■■■□□ 2.22
LSM14A-207ENST00000589878 FAM135BQ49AJ0 1406 aa28.89■■■□□ 2.22
LSM14A-207ENST00000589878 SLC26A8Q96RN1 970 aa28.89■■■□□ 2.22
LSM14A-207ENST00000589878 KANK1Q14678 1352 aa28.88■■■□□ 2.21
LSM14A-207ENST00000589878 IDI1Q13907 227 aa28.88■■■□□ 2.21
LSM14A-207ENST00000589878 PROSER2Q86WR7 435 aaPredicted RBP28.88■■■□□ 2.21
LSM14A-207ENST00000589878 EFCAB6Q5THR3 1501 aa28.85■■■□□ 2.21
LSM14A-207ENST00000589878 PTPN23Q9H3S7 1636 aa28.85■■■□□ 2.21
LSM14A-207ENST00000589878 KCNA6P17658 529 aa28.85■■■□□ 2.21
LSM14A-207ENST00000589878 POTEAQ6S8J7 498 aa28.85■■■□□ 2.21
LSM14A-207ENST00000589878 CHIC2Q9UKJ5 165 aa28.85■■■□□ 2.21
LSM14A-207ENST00000589878 ROBO1Q9Y6N7 1651 aa28.83■■■□□ 2.21
LSM14A-207ENST00000589878 BCANQ96GW7 911 aa28.82■■■□□ 2.2
LSM14A-207ENST00000589878 DAPK1P53355 1430 aa28.81■■■□□ 2.2
LSM14A-207ENST00000589878 TET3O43151 1660 aa28.79■■■□□ 2.2
LSM14A-207ENST00000589878 KDM5AP29375 1690 aaKnown RBP28.79■■■□□ 2.2
LSM14A-207ENST00000589878 APLP2Q06481 763 aa28.75■■■□□ 2.19
LSM14A-207ENST00000589878 ANKRD30AQ9BXX3 1397 aa28.75■■■□□ 2.19
LSM14A-207ENST00000589878 LMTK2Q8IWU2 1503 aa28.74■■■□□ 2.19
LSM14A-207ENST00000589878 ADGRB3O60242 1522 aa28.72■■■□□ 2.19
LSM14A-207ENST00000589878 MSH6P52701 1360 aa28.71■■■□□ 2.19
LSM14A-207ENST00000589878 NOS1P29475 1434 aa28.7■■■□□ 2.19
LSM14A-207ENST00000589878 FGD6Q6ZV73 1430 aa28.7■■■□□ 2.19
LSM14A-207ENST00000589878 SLAIN2Q9P270 581 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 267.8 ms