RNA–Protein interactions for RNA: ENST00000589851.1

PTPRS-207, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 5

Gene PTPRS, Length 1,270 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-207ENST00000589851 CLTCQ00610 1675 aaKnown RBP24.27■■□□□ 1.48
PTPRS-207ENST00000589851 ADGRL2O95490 1459 aa24.26■■□□□ 1.47
PTPRS-207ENST00000589851 SETD1BQ9UPS6 1966 aaKnown RBP24.25■■□□□ 1.47
PTPRS-207ENST00000589851 FAM135AQ9P2D6 1515 aa24.25■■□□□ 1.47
PTPRS-207ENST00000589851 RNF17Q9BXT8 1623 aaKnown RBP24.24■■□□□ 1.47
PTPRS-207ENST00000589851 ZMYM3Q14202 1370 aa24.24■■□□□ 1.47
PTPRS-207ENST00000589851 ERBINQ96RT1 1412 aa24.24■■□□□ 1.47
PTPRS-207ENST00000589851 RRBP1Q9P2E9 1410 aaKnown RBP24.24■■□□□ 1.47
PTPRS-207ENST00000589851 PTPRKQ15262 1439 aa24.21■■□□□ 1.47
PTPRS-207ENST00000589851 KDM5DQ9BY66 1539 aa24.2■■□□□ 1.46
PTPRS-207ENST00000589851 LMTK3Q96Q04 1460 aa24.19■■□□□ 1.46
PTPRS-207ENST00000589851 WASHC2CQ9Y4E1 1318 aa24.18■■□□□ 1.46
PTPRS-207ENST00000589851 PREX1Q8TCU6 1659 aa24.18■■□□□ 1.46
PTPRS-207ENST00000589851 NPATQ14207 1427 aa24.17■■□□□ 1.46
PTPRS-207ENST00000589851 MROH1Q8NDA8 1641 aa24.17■■□□□ 1.46
PTPRS-207ENST00000589851 ROCK1Q13464 1354 aa24.16■■□□□ 1.46
PTPRS-207ENST00000589851 ZC3H13Q5T200 1668 aaKnown RBP24.14■■□□□ 1.45
PTPRS-207ENST00000589851 ITGAEP38570 1179 aa24.13■■□□□ 1.45
PTPRS-207ENST00000589851 DEPDC5O75140 1603 aa24.13■■□□□ 1.45
PTPRS-207ENST00000589851 PRDM15P57071 1507 aaPredicted RBP24.12■■□□□ 1.45
PTPRS-207ENST00000589851 ANKRD50Q9ULJ7 1429 aa24.11■■□□□ 1.45
PTPRS-207ENST00000589851 ABCC3O15438 1527 aa24.11■■□□□ 1.45
PTPRS-207ENST00000589851 UHRF1BP1Q6BDS2 1440 aa24.1■■□□□ 1.45
PTPRS-207ENST00000589851 PZPP20742 1482 aa24.09■■□□□ 1.45
PTPRS-207ENST00000589851 CEP152O94986 1710 aa24.08■■□□□ 1.45
PTPRS-207ENST00000589851 KANK1Q14678 1352 aa24.06■■□□□ 1.44
PTPRS-207ENST00000589851 HSPA2P54652 639 aa24.05■■□□□ 1.44
PTPRS-207ENST00000589851 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.05■■□□□ 1.446e-6■□□□□ 8.2
PTPRS-207ENST00000589851 VWDEQ8N2E2 1590 aa24.04■■□□□ 1.44
PTPRS-207ENST00000589851 CAMSAP1Q5T5Y3 1602 aa24.04■■□□□ 1.44
PTPRS-207ENST00000589851 FBXO31Q5XUX0 539 aaPredicted RBP24.03■■□□□ 1.44
PTPRS-207ENST00000589851 ARHGAP31Q2M1Z3 1444 aa24.01■■□□□ 1.43
PTPRS-207ENST00000589851 LMTK2Q8IWU2 1503 aa24■■□□□ 1.43
PTPRS-207ENST00000589851 MYO3AQ8NEV4 1616 aa24■■□□□ 1.43
PTPRS-207ENST00000589851 TNRQ92752 1358 aa24■■□□□ 1.43
PTPRS-207ENST00000589851 ZNF142P52746 1687 aaPredicted RBP23.99■■□□□ 1.43
PTPRS-207ENST00000589851 CFAP65Q6ZU64 1925 aaKnown RBP23.98■■□□□ 1.43
PTPRS-207ENST00000589851 UNC13BO14795 1591 aa23.97■■□□□ 1.43
PTPRS-207ENST00000589851 SPATA31D1Q6ZQQ2 1576 aa23.96■■□□□ 1.43
PTPRS-207ENST00000589851 CEP170BQ9Y4F5 1589 aaPredicted RBP23.95■■□□□ 1.43
PTPRS-207ENST00000589851 ERVK-7P63135 1459 aa23.94■■□□□ 1.42
PTPRS-207ENST00000589851 A2ML1A8K2U0 1454 aa23.94■■□□□ 1.42
PTPRS-207ENST00000589851 NAIPQ13075 1403 aa23.93■■□□□ 1.42
PTPRS-207ENST00000589851 GCC2Q8IWJ2 1684 aa23.92■■□□□ 1.42
PTPRS-207ENST00000589851 NLRP1Q9C000 1473 aa23.92■■□□□ 1.42
PTPRS-207ENST00000589851 HFM1A2PYH4 1435 aa23.91■■□□□ 1.42
PTPRS-207ENST00000589851 EFCAB6Q5THR3 1501 aa23.9■■□□□ 1.42
PTPRS-207ENST00000589851 STRCQ7RTU9 1775 aa23.9■■□□□ 1.42
PTPRS-207ENST00000589851 TET3O43151 1660 aa23.89■■□□□ 1.42
PTPRS-207ENST00000589851 IQGAP3Q86VI3 1631 aa23.88■■□□□ 1.41
PTPRS-207ENST00000589851 NUP155O75694 1391 aa23.87■■□□□ 1.41
PTPRS-207ENST00000589851 RPRD2Q5VT52 1461 aaKnown RBP23.86■■□□□ 1.41
PTPRS-207ENST00000589851 PLA2R1Q13018 1463 aa23.85■■□□□ 1.41
PTPRS-207ENST00000589851 DMRT2Q9Y5R5 561 aa23.84■■□□□ 1.41
PTPRS-207ENST00000589851 UGGT1Q9NYU2 1555 aa23.82■■□□□ 1.4
PTPRS-207ENST00000589851 NOS1P29475 1434 aa23.82■■□□□ 1.4
PTPRS-207ENST00000589851 THEMISQ8N1K5 641 aaPredicted RBP23.81■■□□□ 1.4
PTPRS-207ENST00000589851 E9PCH4 1651 aa23.79■■□□□ 1.4
PTPRS-207ENST00000589851 PKD2Q13563 968 aa23.79■■□□□ 1.4
PTPRS-207ENST00000589851 SYNMO15061 1565 aa23.78■■□□□ 1.4
PTPRS-207ENST00000589851 PTPRTO14522 1441 aa23.77■■□□□ 1.4
PTPRS-207ENST00000589851 UBR1Q8IWV7 1749 aa23.76■■□□□ 1.39
PTPRS-207ENST00000589851 NCKAP5LQ9HCH0 1330 aa23.76■■□□□ 1.39
PTPRS-207ENST00000589851 SLC52A1Q9NWF4 448 aa23.75■■□□□ 1.39
PTPRS-207ENST00000589851 PIK3C2BO00750 1634 aa23.74■■□□□ 1.39
PTPRS-207ENST00000589851 IDI1Q13907 227 aa23.74■■□□□ 1.39
PTPRS-207ENST00000589851 KDM5AP29375 1690 aaKnown RBP23.73■■□□□ 1.39
PTPRS-207ENST00000589851 TRIM52Q96A61 297 aa23.72■■□□□ 1.39
PTPRS-207ENST00000589851 POLR1AO95602 1720 aaPredicted RBP23.72■■□□□ 1.39
PTPRS-207ENST00000589851 ANKLE2Q86XL3 938 aa23.71■■□□□ 1.39
PTPRS-207ENST00000589851 SETD5Q9C0A6 1442 aa23.68■■□□□ 1.38
PTPRS-207ENST00000589851 STAG3Q9UJ98 1225 aa23.68■■□□□ 1.38
PTPRS-207ENST00000589851 ACIN1Q9UKV3 1341 aaKnown RBP23.67■■□□□ 1.38
PTPRS-207ENST00000589851 ARHGAP23Q9P227 1491 aa23.67■■□□□ 1.38
PTPRS-207ENST00000589851 NEURL4Q96JN8 1562 aa23.66■■□□□ 1.38
PTPRS-207ENST00000589851 SLIT1O75093 1534 aa23.66■■□□□ 1.38
PTPRS-207ENST00000589851 ADGRB3O60242 1522 aa23.65■■□□□ 1.38
PTPRS-207ENST00000589851 SPHKAPQ2M3C7 1700 aa23.64■■□□□ 1.38
PTPRS-207ENST00000589851 MED14O60244 1454 aa23.64■■□□□ 1.38
PTPRS-207ENST00000589851 SLC4A1APQ9BWU0 796 aaKnown RBP23.63■■□□□ 1.37
PTPRS-207ENST00000589851 TMEM2Q9UHN6 1383 aa23.63■■□□□ 1.37
PTPRS-207ENST00000589851 MYO5BQ9ULV0 1848 aa23.61■■□□□ 1.37
PTPRS-207ENST00000589851 NPHP4O75161 1426 aaPredicted RBP23.6■■□□□ 1.37
PTPRS-207ENST00000589851 TMEM131LA2VDJ0 1609 aa23.6■■□□□ 1.37
PTPRS-207ENST00000589851 EID1Q9Y6B2 187 aa23.6■■□□□ 1.37
PTPRS-207ENST00000589851 SCAF11Q99590 1463 aaKnown RBP23.6■■□□□ 1.37
PTPRS-207ENST00000589851 LTKP29376 864 aa23.59■■□□□ 1.37
PTPRS-207ENST00000589851 TXNDC2Q86VQ3 553 aa23.59■■□□□ 1.37
PTPRS-207ENST00000589851 IQGAP1P46940 1657 aa23.58■■□□□ 1.37
PTPRS-207ENST00000589851 RAB3GAP2Q9H2M9 1393 aa23.58■■□□□ 1.37
PTPRS-207ENST00000589851 TRPM2O94759 1503 aa23.56■■□□□ 1.36
PTPRS-207ENST00000589851 MPHOSPH9Q99550 1183 aa23.55■■□□□ 1.36
PTPRS-207ENST00000589851 CHGAP10645 457 aaKnown RBP23.54■■□□□ 1.36
PTPRS-207ENST00000589851 HRCP23327 699 aa23.54■■□□□ 1.36
PTPRS-207ENST00000589851 LTBP4Q8N2S1 1624 aa23.54■■□□□ 1.36
PTPRS-207ENST00000589851 CERKQ8TCT0 537 aa23.53■■□□□ 1.36
PTPRS-207ENST00000589851 ZNF335Q9H4Z2 1342 aaPredicted RBP23.52■■□□□ 1.36
PTPRS-207ENST00000589851 CLTCL1P53675 1640 aa23.51■■□□□ 1.35
PTPRS-207ENST00000589851 ZFYVE9O95405 1425 aa23.51■■□□□ 1.35
PTPRS-207ENST00000589851 HDGFP51858 240 aaKnown RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms