RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 FAM135AQ9P2D6 1515 aa15.36■□□□□ 0.05
PTPN2-208ENST00000589216 KIF15Q9NS87 1388 aa15.36■□□□□ 0.05
PTPN2-208ENST00000589216 GGT6Q6P531 493 aa15.35■□□□□ 0.05
PTPN2-208ENST00000589216 DEPDC5O75140 1603 aa15.35■□□□□ 0.05
PTPN2-208ENST00000589216 ZNF142P52746 1687 aaPredicted RBP15.35■□□□□ 0.05
PTPN2-208ENST00000589216 ZC3H13Q5T200 1668 aaKnown RBP15.35■□□□□ 0.05
PTPN2-208ENST00000589216 ADGRL2O95490 1459 aa15.34■□□□□ 0.05
PTPN2-208ENST00000589216 PRDM15P57071 1507 aaPredicted RBP15.34■□□□□ 0.05
PTPN2-208ENST00000589216 KIF3BO15066 747 aa15.34■□□□□ 0.05
PTPN2-208ENST00000589216 ABCC3O15438 1527 aa15.33■□□□□ 0.05
PTPN2-208ENST00000589216 HSPA2P54652 639 aa15.33■□□□□ 0.04
PTPN2-208ENST00000589216 ZMYM3Q14202 1370 aa15.33■□□□□ 0.04
PTPN2-208ENST00000589216 PTPRKQ15262 1439 aa15.33■□□□□ 0.04
PTPN2-208ENST00000589216 SETD1BQ9UPS6 1966 aaKnown RBP15.33■□□□□ 0.04
PTPN2-208ENST00000589216 ESF1Q9H501 851 aaKnown RBP15.32■□□□□ 0.04
PTPN2-208ENST00000589216 ERBINQ96RT1 1412 aa15.32■□□□□ 0.04
PTPN2-208ENST00000589216 CAMSAP1Q5T5Y3 1602 aa15.32■□□□□ 0.04
PTPN2-208ENST00000589216 NPATQ14207 1427 aa15.31■□□□□ 0.04
PTPN2-208ENST00000589216 UHRF1BP1Q6BDS2 1440 aa15.31■□□□□ 0.04
PTPN2-208ENST00000589216 FAM50AQ14320 339 aaKnown RBP15.3■□□□□ 0.04
PTPN2-208ENST00000589216 STRCQ7RTU9 1775 aa15.3■□□□□ 0.04
PTPN2-208ENST00000589216 PZPP20742 1482 aa15.29■□□□□ 0.04
PTPN2-208ENST00000589216 NCOA1Q15788 1441 aa15.29■□□□□ 0.04
PTPN2-208ENST00000589216 CHIC2Q9UKJ5 165 aa15.29■□□□□ 0.04
PTPN2-208ENST00000589216 CEP170BQ9Y4F5 1589 aaPredicted RBP15.28■□□□□ 0.04
PTPN2-208ENST00000589216 RRP7BPQ9NSQ0 103 aa15.28■□□□□ 0.04
PTPN2-208ENST00000589216 ANKRD30AQ9BXX3 1397 aa15.27■□□□□ 0.04
PTPN2-208ENST00000589216 VWDEQ8N2E2 1590 aa15.26■□□□□ 0.03
PTPN2-208ENST00000589216 RRBP1Q9P2E9 1410 aaKnown RBP15.25■□□□□ 0.03
PTPN2-208ENST00000589216 PPP6R1Q9UPN7 881 aa15.24■□□□□ 0.03
PTPN2-208ENST00000589216 UNC13BO14795 1591 aa15.24■□□□□ 0.03
PTPN2-208ENST00000589216 SPATA31D1Q6ZQQ2 1576 aa15.24■□□□□ 0.03
PTPN2-208ENST00000589216 WASHC2CQ9Y4E1 1318 aa15.22■□□□□ 0.03
PTPN2-208ENST00000589216 CFAP65Q6ZU64 1925 aaKnown RBP15.22■□□□□ 0.03
PTPN2-208ENST00000589216 FBXO31Q5XUX0 539 aaPredicted RBP15.22■□□□□ 0.03
PTPN2-208ENST00000589216 ERVK-7P63135 1459 aa15.21■□□□□ 0.03
PTPN2-208ENST00000589216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.21■□□□□ 0.02
PTPN2-208ENST00000589216 A2ML1A8K2U0 1454 aa15.2■□□□□ 0.02
PTPN2-208ENST00000589216 ANKRD50Q9ULJ7 1429 aa15.2■□□□□ 0.02
PTPN2-208ENST00000589216 EFCAB6Q5THR3 1501 aa15.2■□□□□ 0.02
PTPN2-208ENST00000589216 LMTK2Q8IWU2 1503 aa15.2■□□□□ 0.02
PTPN2-208ENST00000589216 TNRQ92752 1358 aa15.2■□□□□ 0.02
PTPN2-208ENST00000589216 ROCK1Q13464 1354 aa15.19■□□□□ 0.02
PTPN2-208ENST00000589216 GCC2Q8IWJ2 1684 aa15.19■□□□□ 0.02
PTPN2-208ENST00000589216 POLR1AO95602 1720 aaPredicted RBP15.17■□□□□ 0.02
PTPN2-208ENST00000589216 ITGAEP38570 1179 aa15.17■□□□□ 0.02
PTPN2-208ENST00000589216 TET3O43151 1660 aa15.16■□□□□ 0.02
PTPN2-208ENST00000589216 SYNMO15061 1565 aa15.16■□□□□ 0.02
PTPN2-208ENST00000589216 ARHGAP31Q2M1Z3 1444 aa15.16■□□□□ 0.02
PTPN2-208ENST00000589216 NEURL4Q96JN8 1562 aa15.15■□□□□ 0.02
PTPN2-208ENST00000589216 PLA2R1Q13018 1463 aa15.15■□□□□ 0.02
PTPN2-208ENST00000589216 NLRP1Q9C000 1473 aa15.15■□□□□ 0.02
PTPN2-208ENST00000589216 UBR1Q8IWV7 1749 aa15.15■□□□□ 0.02
PTPN2-208ENST00000589216 IQGAP3Q86VI3 1631 aa15.15■□□□□ 0.02
PTPN2-208ENST00000589216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.15■□□□□ 0.02
PTPN2-208ENST00000589216 E9PCH4 1651 aa15.13■□□□□ 0.01
PTPN2-208ENST00000589216 UGGT1Q9NYU2 1555 aa15.13■□□□□ 0.01
PTPN2-208ENST00000589216 PIK3C2BO00750 1634 aa15.13■□□□□ 0.01
PTPN2-208ENST00000589216 KANK1Q14678 1352 aa15.12■□□□□ 0.01
PTPN2-208ENST00000589216 PTPRTO14522 1441 aa15.09■□□□□ 0.01
PTPN2-208ENST00000589216 NAIPQ13075 1403 aa15.09■□□□□ 0.01
PTPN2-208ENST00000589216 NCKAP5LQ9HCH0 1330 aa15.08■□□□□ 0
PTPN2-208ENST00000589216 NOS1P29475 1434 aa15.08■□□□□ 0
PTPN2-208ENST00000589216 MYO5BQ9ULV0 1848 aa15.07■□□□□ 0
PTPN2-208ENST00000589216 RPRD2Q5VT52 1461 aaKnown RBP15.06■□□□□ 0
PTPN2-208ENST00000589216 LTBP4Q8N2S1 1624 aa15.06■□□□□ 0
PTPN2-208ENST00000589216 KDM5AP29375 1690 aaKnown RBP15.06■□□□□ 0
PTPN2-208ENST00000589216 HFM1A2PYH4 1435 aa15.05■□□□□ -0
PTPN2-208ENST00000589216 ADGRB3O60242 1522 aa15.05■□□□□ -0
PTPN2-208ENST00000589216 IQGAP1P46940 1657 aa15.05■□□□□ -0
PTPN2-208ENST00000589216 SPHKAPQ2M3C7 1700 aa15.03■□□□□ -0
PTPN2-208ENST00000589216 SLIT1O75093 1534 aa15.02■□□□□ -0
PTPN2-208ENST00000589216 ARHGAP23Q9P227 1491 aa15.02■□□□□ -0
PTPN2-208ENST00000589216 NUP155O75694 1391 aa15.01□□□□□ -0.01
PTPN2-208ENST00000589216 TMEM131LA2VDJ0 1609 aa15□□□□□ -0.01
PTPN2-208ENST00000589216 PKD2Q13563 968 aa15□□□□□ -0.01
PTPN2-208ENST00000589216 DMRT2Q9Y5R5 561 aa15□□□□□ -0.01
PTPN2-208ENST00000589216 MED14O60244 1454 aa15□□□□□ -0.01
PTPN2-208ENST00000589216 SCAF11Q99590 1463 aaKnown RBP14.99□□□□□ -0.01
PTPN2-208ENST00000589216 STRCP1A6NGW2 1772 aa14.98□□□□□ -0.01
PTPN2-208ENST00000589216 ZNF335Q9H4Z2 1342 aaPredicted RBP14.98□□□□□ -0.01
PTPN2-208ENST00000589216 ILDR1Q86SU0 546 aaPredicted RBP14.98□□□□□ -0.01
PTPN2-208ENST00000589216 NPHP4O75161 1426 aaPredicted RBP14.98□□□□□ -0.01
PTPN2-208ENST00000589216 IDI1Q13907 227 aa14.97□□□□□ -0.01
PTPN2-208ENST00000589216 THEMISQ8N1K5 641 aaPredicted RBP14.97□□□□□ -0.01
PTPN2-208ENST00000589216 CLTCL1P53675 1640 aa14.96□□□□□ -0.01
PTPN2-208ENST00000589216 TMEM2Q9UHN6 1383 aa14.95□□□□□ -0.02
PTPN2-208ENST00000589216 CERKQ8TCT0 537 aa14.94□□□□□ -0.02
PTPN2-208ENST00000589216 TRPM2O94759 1503 aa14.93□□□□□ -0.02
PTPN2-208ENST00000589216 LTKP29376 864 aa14.93□□□□□ -0.02
PTPN2-208ENST00000589216 ANKLE2Q86XL3 938 aa14.93□□□□□ -0.02
PTPN2-208ENST00000589216 ZFYVE9O95405 1425 aa14.92□□□□□ -0.02
PTPN2-208ENST00000589216 FBXO41Q8TF61 875 aa14.89□□□□□ -0.03
PTPN2-208ENST00000589216 SLC52A1Q9NWF4 448 aa14.89□□□□□ -0.03
PTPN2-208ENST00000589216 IQSEC2Q5JU85 1478 aa14.89□□□□□ -0.03
PTPN2-208ENST00000589216 CPS1P31327 1500 aa14.88□□□□□ -0.03
PTPN2-208ENST00000589216 STAG3Q9UJ98 1225 aa14.88□□□□□ -0.03
PTPN2-208ENST00000589216 XIRP1Q702N8 1843 aaKnown RBP14.87□□□□□ -0.03
PTPN2-208ENST00000589216 RIMS2Q9UQ26 1411 aa14.87□□□□□ -0.03
PTPN2-208ENST00000589216 TXNDC2Q86VQ3 553 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms