RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 ITGAEP38570 1179 aa26.83■■□□□ 1.89
DNMT1-215ENST00000588913 RNF17Q9BXT8 1623 aaKnown RBP26.82■■□□□ 1.88
DNMT1-215ENST00000588913 EIF2AK4Q9P2K8 1649 aaKnown RBP26.82■■□□□ 1.88
DNMT1-215ENST00000588913 ANKRD30AQ9BXX3 1397 aa26.8■■□□□ 1.88
DNMT1-215ENST00000588913 MROH2AA6NES4 1674 aa26.77■■□□□ 1.88
DNMT1-215ENST00000588913 ERBINQ96RT1 1412 aa26.76■■□□□ 1.87
DNMT1-215ENST00000588913 DEPDC5O75140 1603 aa26.73■■□□□ 1.87
DNMT1-215ENST00000588913 CNTLNQ9NXG0 1405 aa26.72■■□□□ 1.87
DNMT1-215ENST00000588913 CEP152O94986 1710 aa26.72■■□□□ 1.87
DNMT1-215ENST00000588913 ZMYM3Q14202 1370 aa26.71■■□□□ 1.87
DNMT1-215ENST00000588913 ROCK1Q13464 1354 aa26.7■■□□□ 1.87
DNMT1-215ENST00000588913 KDM5DQ9BY66 1539 aa26.7■■□□□ 1.86
DNMT1-215ENST00000588913 ABCC3O15438 1527 aa26.69■■□□□ 1.86
DNMT1-215ENST00000588913 PRDM15P57071 1507 aaPredicted RBP26.69■■□□□ 1.86
DNMT1-215ENST00000588913 ESF1Q9H501 851 aaKnown RBP26.68■■□□□ 1.86
DNMT1-215ENST00000588913 ANKRD50Q9ULJ7 1429 aa26.67■■□□□ 1.86
DNMT1-215ENST00000588913 LMTK3Q96Q04 1460 aa26.66■■□□□ 1.86
DNMT1-215ENST00000588913 PCGF6Q9BYE7 350 aa26.64■■□□□ 1.86
DNMT1-215ENST00000588913 PPP6R1Q9UPN7 881 aa26.64■■□□□ 1.86
DNMT1-215ENST00000588913 WASHC2CQ9Y4E1 1318 aa26.63■■□□□ 1.85
DNMT1-215ENST00000588913 FAM135AQ9P2D6 1515 aa26.63■■□□□ 1.85
DNMT1-215ENST00000588913 ZC3H13Q5T200 1668 aaKnown RBP26.63■■□□□ 1.85
DNMT1-215ENST00000588913 VWDEQ8N2E2 1590 aa26.63■■□□□ 1.85
DNMT1-215ENST00000588913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.61■■□□□ 1.85
DNMT1-215ENST00000588913 CAMSAP1Q5T5Y3 1602 aa26.61■■□□□ 1.85
DNMT1-215ENST00000588913 PREX1Q8TCU6 1659 aa26.61■■□□□ 1.85
DNMT1-215ENST00000588913 FBXO31Q5XUX0 539 aaPredicted RBP26.59■■□□□ 1.85
DNMT1-215ENST00000588913 UNC13BO14795 1591 aa26.59■■□□□ 1.85
DNMT1-215ENST00000588913 GCC2Q8IWJ2 1684 aa26.58■■□□□ 1.85
DNMT1-215ENST00000588913 NAIPQ13075 1403 aa26.58■■□□□ 1.84
DNMT1-215ENST00000588913 PZPP20742 1482 aa26.57■■□□□ 1.84
DNMT1-215ENST00000588913 SETD1BQ9UPS6 1966 aaKnown RBP26.55■■□□□ 1.84
DNMT1-215ENST00000588913 CFAP65Q6ZU64 1925 aaKnown RBP26.55■■□□□ 1.84
DNMT1-215ENST00000588913 NPATQ14207 1427 aa26.54■■□□□ 1.84
DNMT1-215ENST00000588913 HSPA2P54652 639 aa26.54■■□□□ 1.84
DNMT1-215ENST00000588913 MYO3AQ8NEV4 1616 aa26.53■■□□□ 1.84
DNMT1-215ENST00000588913 LMTK2Q8IWU2 1503 aa26.51■■□□□ 1.84
DNMT1-215ENST00000588913 HFM1A2PYH4 1435 aa26.49■■□□□ 1.83
DNMT1-215ENST00000588913 UHRF1BP1Q6BDS2 1440 aa26.49■■□□□ 1.83
DNMT1-215ENST00000588913 SPATA31D1Q6ZQQ2 1576 aa26.48■■□□□ 1.83
DNMT1-215ENST00000588913 EFCAB6Q5THR3 1501 aa26.47■■□□□ 1.83
DNMT1-215ENST00000588913 ERVK-7P63135 1459 aa26.47■■□□□ 1.83
DNMT1-215ENST00000588913 IQGAP3Q86VI3 1631 aa26.47■■□□□ 1.83
DNMT1-215ENST00000588913 KANK1Q14678 1352 aa26.46■■□□□ 1.83
DNMT1-215ENST00000588913 ZNF142P52746 1687 aaPredicted RBP26.45■■□□□ 1.83
DNMT1-215ENST00000588913 ARHGAP31Q2M1Z3 1444 aa26.45■■□□□ 1.82
DNMT1-215ENST00000588913 TNRQ92752 1358 aa26.44■■□□□ 1.82
DNMT1-215ENST00000588913 TRIM26Q12899 539 aaPredicted RBP26.44■■□□□ 1.82
DNMT1-215ENST00000588913 TET3O43151 1660 aa26.44■■□□□ 1.82
DNMT1-215ENST00000588913 CEP170BQ9Y4F5 1589 aaPredicted RBP26.43■■□□□ 1.82
DNMT1-215ENST00000588913 E9PCH4 1651 aa26.41■■□□□ 1.82
DNMT1-215ENST00000588913 NUP155O75694 1391 aa26.4■■□□□ 1.82
DNMT1-215ENST00000588913 SYNMO15061 1565 aa26.39■■□□□ 1.81
DNMT1-215ENST00000588913 STRCQ7RTU9 1775 aa26.39■■□□□ 1.81
DNMT1-215ENST00000588913 A2ML1A8K2U0 1454 aa26.36■■□□□ 1.81
DNMT1-215ENST00000588913 NOS1P29475 1434 aa26.34■■□□□ 1.81
DNMT1-215ENST00000588913 NLRP1Q9C000 1473 aa26.3■■□□□ 1.8
DNMT1-215ENST00000588913 PIK3C2BO00750 1634 aa26.3■■□□□ 1.8
DNMT1-215ENST00000588913 RPRD2Q5VT52 1461 aaKnown RBP26.29■■□□□ 1.8
DNMT1-215ENST00000588913 UGGT1Q9NYU2 1555 aa26.29■■□□□ 1.8
DNMT1-215ENST00000588913 UBR1Q8IWV7 1749 aa26.29■■□□□ 1.8
DNMT1-215ENST00000588913 SETD5Q9C0A6 1442 aa26.27■■□□□ 1.8
DNMT1-215ENST00000588913 TRIM52Q96A61 297 aa26.24■■□□□ 1.79
DNMT1-215ENST00000588913 RAB3GAP2Q9H2M9 1393 aa26.24■■□□□ 1.79
DNMT1-215ENST00000588913 IDI1Q13907 227 aa26.23■■□□□ 1.79
DNMT1-215ENST00000588913 NCKAP5LQ9HCH0 1330 aa26.22■■□□□ 1.79
DNMT1-215ENST00000588913 SPHKAPQ2M3C7 1700 aa26.21■■□□□ 1.79
DNMT1-215ENST00000588913 MYO5BQ9ULV0 1848 aa26.21■■□□□ 1.79
DNMT1-215ENST00000588913 ZEB1P37275 1124 aaPredicted RBP26.2■■□□□ 1.79
DNMT1-215ENST00000588913 PLA2R1Q13018 1463 aa26.2■■□□□ 1.79
DNMT1-215ENST00000588913 NEURL4Q96JN8 1562 aa26.19■■□□□ 1.78
DNMT1-215ENST00000588913 POLR1AO95602 1720 aaPredicted RBP26.17■■□□□ 1.78
DNMT1-215ENST00000588913 PTPRTO14522 1441 aa26.16■■□□□ 1.78
DNMT1-215ENST00000588913 ADGRB3O60242 1522 aa26.15■■□□□ 1.78
DNMT1-215ENST00000588913 PKD2Q13563 968 aa26.15■■□□□ 1.78
DNMT1-215ENST00000588913 FOXD1Q16676 465 aa26.15■■□□□ 1.78
DNMT1-215ENST00000588913 TMEM131LA2VDJ0 1609 aa26.13■■□□□ 1.77
DNMT1-215ENST00000588913 SLC4A1APQ9BWU0 796 aaKnown RBP26.13■■□□□ 1.77
DNMT1-215ENST00000588913 KDM5AP29375 1690 aaKnown RBP26.13■■□□□ 1.77
DNMT1-215ENST00000588913 CLTCL1P53675 1640 aa26.12■■□□□ 1.77
DNMT1-215ENST00000588913 THEMISQ8N1K5 641 aaPredicted RBP26.12■■□□□ 1.77
DNMT1-215ENST00000588913 ARHGAP23Q9P227 1491 aa26.12■■□□□ 1.77
DNMT1-215ENST00000588913 SLIT1O75093 1534 aa26.1■■□□□ 1.77
DNMT1-215ENST00000588913 TRPM2O94759 1503 aa26.1■■□□□ 1.77
DNMT1-215ENST00000588913 MPHOSPH9Q99550 1183 aa26.1■■□□□ 1.77
DNMT1-215ENST00000588913 SLC52A1Q9NWF4 448 aa26.1■■□□□ 1.77
DNMT1-215ENST00000588913 LTKP29376 864 aa26.07■■□□□ 1.76
DNMT1-215ENST00000588913 TMEM2Q9UHN6 1383 aa26.05■■□□□ 1.76
DNMT1-215ENST00000588913 ANKLE2Q86XL3 938 aa26.02■■□□□ 1.76
DNMT1-215ENST00000588913 STAG3Q9UJ98 1225 aa26.02■■□□□ 1.76
DNMT1-215ENST00000588913 MED14O60244 1454 aa26.02■■□□□ 1.76
DNMT1-215ENST00000588913 SCAF11Q99590 1463 aaKnown RBP26.02■■□□□ 1.76
DNMT1-215ENST00000588913 ZFYVE9O95405 1425 aa26.01■■□□□ 1.75
DNMT1-215ENST00000588913 IQGAP1P46940 1657 aa26.01■■□□□ 1.75
DNMT1-215ENST00000588913 CHGAP10645 457 aaKnown RBP26■■□□□ 1.75
DNMT1-215ENST00000588913 NPHP4O75161 1426 aaPredicted RBP26■■□□□ 1.75
DNMT1-215ENST00000588913 TXNDC2Q86VQ3 553 aa25.98■■□□□ 1.75
DNMT1-215ENST00000588913 DMRT2Q9Y5R5 561 aa25.98■■□□□ 1.75
DNMT1-215ENST00000588913 KIF1BO60333 1816 aa25.96■■□□□ 1.75
DNMT1-215ENST00000588913 LTBP4Q8N2S1 1624 aa25.95■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms