RNA–Protein interactions for RNA: ENST00000588896.1

CACNA2D4-224, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 5

Gene CACNA2D4, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-224ENST00000588896 FER1L4A9Z1Z3 1794 aa20.77■□□□□ 0.92
CACNA2D4-224ENST00000588896 RIMS1Q86UR5 1692 aaKnown RBP20.77■□□□□ 0.92
CACNA2D4-224ENST00000588896 FAM135AQ9P2D6 1515 aa20.73■□□□□ 0.91
CACNA2D4-224ENST00000588896 RNF17Q9BXT8 1623 aaKnown RBP20.71■□□□□ 0.91
CACNA2D4-224ENST00000588896 ANKRD50Q9ULJ7 1429 aa20.71■□□□□ 0.91
CACNA2D4-224ENST00000588896 KDM5DQ9BY66 1539 aa20.7■□□□□ 0.9
CACNA2D4-224ENST00000588896 PLPPR3Q6T4P5 718 aa20.7■□□□□ 0.9
CACNA2D4-224ENST00000588896 WASHC2CQ9Y4E1 1318 aa20.69■□□□□ 0.9
CACNA2D4-224ENST00000588896 CEBPAP49715 358 aaPredicted RBP20.66■□□□□ 0.9
CACNA2D4-224ENST00000588896 ZMYM3Q14202 1370 aa20.66■□□□□ 0.9
CACNA2D4-224ENST00000588896 KANK1Q14678 1352 aa20.66■□□□□ 0.9
CACNA2D4-224ENST00000588896 PRDM15P57071 1507 aaPredicted RBP20.66■□□□□ 0.9
CACNA2D4-224ENST00000588896 MROH2AA6NES4 1674 aa20.66■□□□□ 0.9
CACNA2D4-224ENST00000588896 CLTCQ00610 1675 aaKnown RBP20.65■□□□□ 0.9
CACNA2D4-224ENST00000588896 MROH1Q8NDA8 1641 aa20.65■□□□□ 0.9
CACNA2D4-224ENST00000588896 ABCC3O15438 1527 aa20.63■□□□□ 0.89
CACNA2D4-224ENST00000588896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.63■□□□□ 0.89
CACNA2D4-224ENST00000588896 DEPDC5O75140 1603 aa20.63■□□□□ 0.89
CACNA2D4-224ENST00000588896 ZC3H13Q5T200 1668 aaKnown RBP20.62■□□□□ 0.89
CACNA2D4-224ENST00000588896 HFM1A2PYH4 1435 aa20.61■□□□□ 0.89
CACNA2D4-224ENST00000588896 NPATQ14207 1427 aa20.61■□□□□ 0.89
CACNA2D4-224ENST00000588896 C3P01024 1663 aa20.61■□□□□ 0.89
CACNA2D4-224ENST00000588896 NAIPQ13075 1403 aa20.6■□□□□ 0.89
CACNA2D4-224ENST00000588896 PZPP20742 1482 aa20.58■□□□□ 0.89
CACNA2D4-224ENST00000588896 UNC13BO14795 1591 aa20.55■□□□□ 0.88
CACNA2D4-224ENST00000588896 VWDEQ8N2E2 1590 aa20.55■□□□□ 0.88
CACNA2D4-224ENST00000588896 LMTK2Q8IWU2 1503 aa20.55■□□□□ 0.88
CACNA2D4-224ENST00000588896 GCC2Q8IWJ2 1684 aa20.54■□□□□ 0.88
CACNA2D4-224ENST00000588896 UHRF1BP1Q6BDS2 1440 aa20.54■□□□□ 0.88
CACNA2D4-224ENST00000588896 ARHGAP31Q2M1Z3 1444 aa20.53■□□□□ 0.88
CACNA2D4-224ENST00000588896 CAMSAP1Q5T5Y3 1602 aa20.53■□□□□ 0.88
CACNA2D4-224ENST00000588896 LMTK3Q96Q04 1460 aa20.52■□□□□ 0.88
CACNA2D4-224ENST00000588896 NUP155O75694 1391 aa20.51■□□□□ 0.87
CACNA2D4-224ENST00000588896 CEP152O94986 1710 aa20.51■□□□□ 0.87
CACNA2D4-224ENST00000588896 TNRQ92752 1358 aa20.5■□□□□ 0.87
CACNA2D4-224ENST00000588896 FBXO31Q5XUX0 539 aaPredicted RBP20.5■□□□□ 0.87
CACNA2D4-224ENST00000588896 PREX1Q8TCU6 1659 aa20.5■□□□□ 0.87
CACNA2D4-224ENST00000588896 EFCAB6Q5THR3 1501 aa20.49■□□□□ 0.87
CACNA2D4-224ENST00000588896 ERVK-7P63135 1459 aa20.48■□□□□ 0.87
CACNA2D4-224ENST00000588896 IQGAP3Q86VI3 1631 aa20.46■□□□□ 0.87
CACNA2D4-224ENST00000588896 SPATA31D1Q6ZQQ2 1576 aa20.46■□□□□ 0.87
CACNA2D4-224ENST00000588896 RPRD2Q5VT52 1461 aaKnown RBP20.45■□□□□ 0.86
CACNA2D4-224ENST00000588896 MYO3AQ8NEV4 1616 aa20.45■□□□□ 0.86
CACNA2D4-224ENST00000588896 TET3O43151 1660 aa20.44■□□□□ 0.86
CACNA2D4-224ENST00000588896 NLRP1Q9C000 1473 aa20.43■□□□□ 0.86
CACNA2D4-224ENST00000588896 ACIN1Q9UKV3 1341 aaKnown RBP20.43■□□□□ 0.86
CACNA2D4-224ENST00000588896 SETD5Q9C0A6 1442 aa20.43■□□□□ 0.86
CACNA2D4-224ENST00000588896 TRIM52Q96A61 297 aa20.42■□□□□ 0.86
CACNA2D4-224ENST00000588896 HSPA2P54652 639 aa20.41■□□□□ 0.86
CACNA2D4-224ENST00000588896 A2ML1A8K2U0 1454 aa20.41■□□□□ 0.86
CACNA2D4-224ENST00000588896 CEP170BQ9Y4F5 1589 aaPredicted RBP20.41■□□□□ 0.86
CACNA2D4-224ENST00000588896 SETD1BQ9UPS6 1966 aaKnown RBP20.39■□□□□ 0.86
CACNA2D4-224ENST00000588896 ZNF142P52746 1687 aaPredicted RBP20.38■□□□□ 0.85
CACNA2D4-224ENST00000588896 NOS1P29475 1434 aa20.38■□□□□ 0.85
CACNA2D4-224ENST00000588896 RAB3GAP2Q9H2M9 1393 aa20.36■□□□□ 0.85
CACNA2D4-224ENST00000588896 SLC4A1APQ9BWU0 796 aaKnown RBP20.34■□□□□ 0.85
CACNA2D4-224ENST00000588896 SLC52A1Q9NWF4 448 aa20.33■□□□□ 0.85
CACNA2D4-224ENST00000588896 SYNMO15061 1565 aa20.33■□□□□ 0.84
CACNA2D4-224ENST00000588896 UGGT1Q9NYU2 1555 aa20.33■□□□□ 0.84
CACNA2D4-224ENST00000588896 E9PCH4 1651 aa20.32■□□□□ 0.84
CACNA2D4-224ENST00000588896 PLA2R1Q13018 1463 aa20.31■□□□□ 0.84
CACNA2D4-224ENST00000588896 THEMISQ8N1K5 641 aaPredicted RBP20.31■□□□□ 0.84
CACNA2D4-224ENST00000588896 TRIM26Q12899 539 aaPredicted RBP20.3■□□□□ 0.84
CACNA2D4-224ENST00000588896 PKD2Q13563 968 aa20.3■□□□□ 0.84
CACNA2D4-224ENST00000588896 HRCP23327 699 aa20.29■□□□□ 0.84
CACNA2D4-224ENST00000588896 IDI1Q13907 227 aa20.28■□□□□ 0.84
CACNA2D4-224ENST00000588896 STAG3Q9UJ98 1225 aa20.28■□□□□ 0.84
CACNA2D4-224ENST00000588896 PTPRTO14522 1441 aa20.27■□□□□ 0.84
CACNA2D4-224ENST00000588896 MPHOSPH9Q99550 1183 aa20.27■□□□□ 0.84
CACNA2D4-224ENST00000588896 DMRT2Q9Y5R5 561 aa20.26■□□□□ 0.83
CACNA2D4-224ENST00000588896 PIK3C2BO00750 1634 aa20.25■□□□□ 0.83
CACNA2D4-224ENST00000588896 ADGRB3O60242 1522 aa20.24■□□□□ 0.83
CACNA2D4-224ENST00000588896 TRPM2O94759 1503 aa20.23■□□□□ 0.83
CACNA2D4-224ENST00000588896 UBR1Q8IWV7 1749 aa20.22■□□□□ 0.83
CACNA2D4-224ENST00000588896 ANKLE2Q86XL3 938 aa20.22■□□□□ 0.83
CACNA2D4-224ENST00000588896 KDM5AP29375 1690 aaKnown RBP20.21■□□□□ 0.83
CACNA2D4-224ENST00000588896 CFAP65Q6ZU64 1925 aaKnown RBP20.21■□□□□ 0.83
CACNA2D4-224ENST00000588896 SPHKAPQ2M3C7 1700 aa20.21■□□□□ 0.83
CACNA2D4-224ENST00000588896 NCKAP5LQ9HCH0 1330 aa20.21■□□□□ 0.83
CACNA2D4-224ENST00000588896 SLIT1O75093 1534 aa20.19■□□□□ 0.82
CACNA2D4-224ENST00000588896 CHGAP10645 457 aaKnown RBP20.19■□□□□ 0.82
CACNA2D4-224ENST00000588896 TMEM2Q9UHN6 1383 aa20.19■□□□□ 0.82
CACNA2D4-224ENST00000588896 ARHGAP23Q9P227 1491 aa20.18■□□□□ 0.82
CACNA2D4-224ENST00000588896 FOXD1Q16676 465 aa20.18■□□□□ 0.82
CACNA2D4-224ENST00000588896 EID1Q9Y6B2 187 aa20.18■□□□□ 0.82
CACNA2D4-224ENST00000588896 STRCQ7RTU9 1775 aa20.18■□□□□ 0.82
CACNA2D4-224ENST00000588896 SCAF11Q99590 1463 aaKnown RBP20.17■□□□□ 0.82
CACNA2D4-224ENST00000588896 TMEM131LA2VDJ0 1609 aa20.14■□□□□ 0.81
CACNA2D4-224ENST00000588896 CLTCL1P53675 1640 aa20.14■□□□□ 0.81
CACNA2D4-224ENST00000588896 CCDC144AA2RUR9 1427 aa20.14■□□□□ 0.81
CACNA2D4-224ENST00000588896 TXNDC2Q86VQ3 553 aa20.14■□□□□ 0.81
CACNA2D4-224ENST00000588896 NEURL4Q96JN8 1562 aa20.13■□□□□ 0.81
CACNA2D4-224ENST00000588896 MED14O60244 1454 aa20.13■□□□□ 0.81
CACNA2D4-224ENST00000588896 NPHP4O75161 1426 aaPredicted RBP20.13■□□□□ 0.81
CACNA2D4-224ENST00000588896 HDGFP51858 240 aaKnown RBP20.13■□□□□ 0.81
CACNA2D4-224ENST00000588896 POLR1AO95602 1720 aaPredicted RBP20.13■□□□□ 0.81
CACNA2D4-224ENST00000588896 RIMS2Q9UQ26 1411 aa20.1■□□□□ 0.81
CACNA2D4-224ENST00000588896 LTKP29376 864 aa20.1■□□□□ 0.81
CACNA2D4-224ENST00000588896 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.1■□□□□ 0.81
CACNA2D4-224ENST00000588896 ZFYVE9O95405 1425 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms